VPS13B, vacuolar protein sorting 13 homolog B, 157680

N. diseases: 158; N. variants: 309
Source: ALL
Disease Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
CUI: C1260926
Disease: Abnormal pigmentation
Abnormal pigmentation
0.100 Biomarker phenotype HPO
CUI: C4021085
Disease: Abnormality of brain morphology
Abnormality of brain morphology
0.100 GeneticVariation phenotype CLINVAR
CUI: C1862475
Disease: Abnormality of retinal pigmentation
Abnormality of retinal pigmentation
0.100 Biomarker phenotype HPO
CUI: C4021735
Disease: Abnormality of the hip bone
Abnormality of the hip bone
0.100 Biomarker disease HPO
CUI: C0158465
Disease: Acquired cubitus valgus
Acquired cubitus valgus
0.100 Biomarker disease HPO
CUI: C0078918
Disease: Albinism, Oculocutaneous
Albinism, Oculocutaneous
0.010 GeneticVariation disease BEFREE Currently, six genes have been identified as causative genes for non-syndromic OCA (OCA-1∼4, 6, 7), and ten genes for syndromic OCA (HPS-1-9, CHS-1). 26165494 2015
CUI: C0003028
Disease: Anhidrosis
Anhidrosis
0.010 GeneticVariation disease BEFREE We conclude that transient, prepubertal alacrima and anhidrosis are part of the phenotypic spectrum of CS associated with a novel homozygous nonsense mutation in the VPS13B gene. 31825161 2020
CUI: C1851792
Disease: Aplasia/Hypoplasia of the earlobes
Aplasia/Hypoplasia of the earlobes
0.100 Biomarker disease HPO
CUI: C4023916
Disease: Aplasia/Hypoplasia of the tongue
Aplasia/Hypoplasia of the tongue
0.100 Biomarker phenotype HPO
CUI: C0003578
Disease: Apnea
Apnea
0.010 GeneticVariation phenotype BEFREE This present study provides an additional piece of support to the hypothesis that the ChF1 and ChS1 are alleles determining the synthesis of usual and atypical cholinesterase together with the likelihood of ChU1ChD1 heterozygotes having occasional suxamethonium apnoea. 1225820 1975
CUI: C0003706
Disease: Arachnodactyly
Arachnodactyly
0.100 Biomarker disease HPO
Attention deficit hyperactivity disorder
0.100 CausalMutation disease CLINVAR
CUI: C1510586
Disease: Autism Spectrum Disorders
Autism Spectrum Disorders
0.020 Biomarker disease BEFREE Mutations in the <i>VPS13B</i> gene are associated with Cohen syndrome and other cognitive disorders such as intellectual disabilities and autism spectrum disorder (ASD). 31495077 2019
CUI: C1510586
Disease: Autism Spectrum Disorders
Autism Spectrum Disorders
0.020 GeneticVariation disease BEFREE We apply whole-exome sequencing (WES) to ASD families enriched for inherited causes due to consanguinity and find familial ASD associated with biallelic mutations in disease genes (AMT, PEX7, SYNE1, VPS13B, PAH, and POMGNT1). 23352163 2013
CUI: C0004352
Disease: Autistic Disorder
Autistic Disorder
0.010 GeneticVariation disease BEFREE As proof of principle, we apply the proposed methods to VPS13B, a gene mutated in the rare neurodevelopmental disorder called Cohen syndrome, and recently reported with recessive variants in autism. 25502226 2014
CUI: C0005890
Disease: Body Height
Body Height
0.100 GeneticVariation phenotype GWASCAT Leveraging Polygenic Functional Enrichment to Improve GWAS Power. 30595370 2019
Bone spicule pigmentation of the retina
0.100 Biomarker phenotype HPO
CUI: C0266470
Disease: Cerebellar Hypoplasia
Cerebellar Hypoplasia
0.100 Biomarker disease HPO
CUI: C0007965
Disease: Chediak-Higashi Syndrome
Chediak-Higashi Syndrome
0.050 GeneticVariation disease BEFREE Mutations in the CHS1 (LYST) gene result in CHS. 15896657 2005
CUI: C0007965
Disease: Chediak-Higashi Syndrome
Chediak-Higashi Syndrome
0.050 GeneticVariation disease BEFREE The CHS1 gene has recently been identified and shown to be homologous to the beige locus of the mouse; however, there has been disagreement as to the length of the functional CHS1 mRNA and protein. 9215679 1997
CUI: C0007965
Disease: Chediak-Higashi Syndrome
Chediak-Higashi Syndrome
0.050 GeneticVariation disease BEFREE Patient 1 is the first report of a severe early-onset CHS with a homozygous missense mutation (c.11362 G>A, p.G3725R) in the LYST/CHS1 gene. 24112114 2014
CUI: C0007965
Disease: Chediak-Higashi Syndrome
Chediak-Higashi Syndrome
0.050 GeneticVariation disease BEFREE In patients with severe childhood CHS, we found only functionally null mutant CHS1 alleles, whereas in patients with the adolescent and adult forms of CHS we also found missense mutant alleles that likely encode CHS1 polypeptides with partial function. 11857544 2002
CUI: C0007965
Disease: Chediak-Higashi Syndrome
Chediak-Higashi Syndrome
0.050 Biomarker disease BEFREE Chediak-Higashi syndrome (CHS) is a very rare autosomal recessive disorder (gene CHS1/LYST) characterized by partial albinism, recurrent infections, and easy bruising. 27669550 2017
CUI: C1332977
Disease: Childhood Leukemia
Childhood Leukemia
0.010 Biomarker disease BEFREE Disruption of VPS13B may thus cause the unusual features of RUNX1-RUNX1T1 leukemia. 29264741 2018
CUI: C1859846
Disease: Childhood-onset truncal obesity
Childhood-onset truncal obesity
0.100 Biomarker phenotype HPO