Disease Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Hereditary Nonpolyposis Colorectal Cancer
0.700 GeneticVariation disease BEFREE The 138 analyzable patients were all proven mismatch repair mutation carriers for LS (MLH1 = 33%, MSH2 = 47%, MSH6 = 15%, PMS2 = 4%, and EPCAM = 1%). 31498154 2019
Hereditary Nonpolyposis Colorectal Cancer
0.700 GeneticVariation disease BEFREE Moreover, the mutations in the EpCAM gene lead to congenital tufting enteropathy, severe intestinal epithelium homeostasis disorders, and Lynch and Lynch syndrome. 30628064 2019
Hereditary Nonpolyposis Colorectal Cancer
0.700 GeneticVariation disease BEFREE Being located immediately upstream of the MSH2 gene, EPCAM abnormalities can affect MSH2 and cause Lynch syndrome. 31273487 2019
Hereditary Nonpolyposis Colorectal Cancer
0.700 GeneticVariation disease BEFREE Toward a better definition of EPCAM deletions in Lynch Syndrome: Report of new variants in Italy and the associated molecular phenotype. 30916491 2019
Hereditary Nonpolyposis Colorectal Cancer
0.700 GeneticVariation disease BEFREE We found a novel large EPCAM-MSH2 duplication associated with LS and the presence of LOHs in regions containing numerous tumor suppressors, raising the hypothesis that these alterations could contribute to cancer susceptibility. 31655866 2019
Hereditary Nonpolyposis Colorectal Cancer
0.700 GeneticVariation disease BEFREE Among confirmed LS, path_MLH1 variants were most commonly identified in Peru (82%), Mexico (80%), Chile (60%), and path_MSH2/EPCAM variants were most frequently identified in Colombia (80%) and Argentina (47%). 30303536 2019
Hereditary Nonpolyposis Colorectal Cancer
0.700 GeneticVariation disease BEFREE Genetic counseling and germline analysis for mutations in genes associated with Lynch syndrome (MLH1, MSH2, MSH6, PMS2, and EPCAM) were offered to individuals with PREMM<sub>1,2,6</sub> scores of 5% or higher. 28668538 2018
Hereditary Nonpolyposis Colorectal Cancer
0.700 GeneticVariation disease BEFREE The genetic basis for hereditary nonpolyposis colorectal cancer is the detection of mutations in the MLH1, MSH2, MSH6, PMS2, and EPCAM genes. 29776633 2018
Hereditary Nonpolyposis Colorectal Cancer
0.700 GeneticVariation disease BEFREE Out of the 11 patients, 9 (0.7%) were finally diagnosed as having Lynch syndrome; the responsible genes included MLH1 (n = 1), MSH2 (n = 4), EPCAM (n = 1) and MSH6 (n = 3). 27920101 2017
Hereditary Nonpolyposis Colorectal Cancer
0.700 GeneticVariation disease BEFREE Cytoplasmic MSH2 immunoreactivity in a patient with Lynch syndrome with an EPCAM-MSH2 fusion. 27896849 2017
Hereditary Nonpolyposis Colorectal Cancer
0.700 GeneticVariation disease BEFREE Next to mutations c. 2041G>A in MLH1 gene and c.942+3A>T in MSH2, the deletion mutation encompassing EPCAM is one of the most common causative changes responsible for LS in Poland. 28369810 2017
Hereditary Nonpolyposis Colorectal Cancer
0.700 Biomarker disease BEFREE We developed a new prediction model, PREMM<sub>5</sub>, that incorporates the genes PMS2 and EPCAM to provide comprehensive LS risk assessment. 28489507 2017
Hereditary Nonpolyposis Colorectal Cancer
0.700 GeneticVariation disease BEFREE The ultimate diagnosis of Lynch syndrome requires documentation of mutation within one of the four MMR genes (MLH1, PMS2, MSH2 and MSH6) or EPCAM, currently achieved by comprehensive sequencing analysis of germline DNA. 26895074 2016
Hereditary Nonpolyposis Colorectal Cancer
0.700 AlteredExpression disease BEFREE Germline deletion of the 3' portion of the Epithelial Cell Adhesion Molecule (EPCAM) gene located 5' upstream of MutS Homolog 2 (MSH2) is a novel mechanism for its inactivation in Lynch syndrome. 26613680 2016
Hereditary Nonpolyposis Colorectal Cancer
0.700 GeneticVariation disease BEFREE Lynch syndrome is a hereditary cancer syndrome associated with high risks of colorectal and endometrial cancer that is caused by pathogenic variants in the mismatch repair genes (MLH1, MSH2, MSH6, PMS2, EPCAM). 27363726 2016
Hereditary Nonpolyposis Colorectal Cancer
0.700 GeneticVariation disease BEFREE EPCAM-CL can be used to screen for EPCAM deletion-induced Lynch syndrome-associated CRC, whereas EPCAM-PL can be used as an indicator of tumor aggressiveness and poor prognosis in CRC. 26528695 2016
Hereditary Nonpolyposis Colorectal Cancer
0.700 GeneticVariation disease BEFREE Using data from the Colon Cancer Family Registry, we compared the proportion of childhood cancers (diagnosed before 18 years of age) in the first-, second-, and third-degree relatives of 781 probands with a pathogenic mutation in one of the MMR genes; MLH1 (n = 275), MSH2 (n = 342), MSH6 (n = 99), or PMS2 (n = 55) or in EPCAM (n = 10) (Lynch syndrome families), with that of 5073 probands with MMR-deficient colorectal cancer (non-Lynch syndrome families). 25963852 2015
Hereditary Nonpolyposis Colorectal Cancer
0.700 Biomarker disease CTD_human Microsatellite instability: an update. 25701956 2015
Hereditary Nonpolyposis Colorectal Cancer
0.700 GeneticVariation disease BEFREE Larger numbers of Lynch syndrome families and screening of the two additional predisposition genes, PMS2 and EPCAM, are needed in order to decipher the full spectrum of mutations associated with Lynch syndrome predisposition in Cyprus. 25133505 2014
Hereditary Nonpolyposis Colorectal Cancer
0.700 GeneticVariation disease BEFREE The identification of an EPCAM founder mutation has useful implications for the molecular diagnosis of LS in Spain. 23530899 2014
Hereditary Nonpolyposis Colorectal Cancer
0.700 GeneticVariation disease BEFREE Lynch syndrome is the most common inherited CRC syndrome and is associated with mutations in DNA mismatch repair genes, mainly MLH1 and MSH2 but also MSH6, PMS2, and EPCAM. 23891921 2014
Hereditary Nonpolyposis Colorectal Cancer
0.700 AlteredExpression disease BEFREE Our study's aim was to explore EPCAM expression in colorectal carcinomas of MSH2-associated LS cases to evaluate the usefulness of EPCAM protein expression in the algorithm approach to LS population screening. 23026194 2013
Hereditary Nonpolyposis Colorectal Cancer
0.700 GeneticVariation disease BEFREE EPCAM germline and somatic rearrangements in Lynch syndrome: identification of a novel 3'EPCAM deletion. 23801599 2013
Hereditary Nonpolyposis Colorectal Cancer
0.700 GeneticVariation disease BEFREE EPCAM deletion carriers constitute a unique subgroup of Lynch syndrome patients. 23264089 2013
Hereditary Nonpolyposis Colorectal Cancer
0.700 GermlineCausalMutation disease ORPHANET Germline deletions in the EPCAM gene as a cause of Lynch syndrome - literature review. 23938213 2013