TMEM106B, transmembrane protein 106B, 54664

N. diseases: 126; N. variants: 13
Source: ALL
Disease Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
CUI: C4693779
Disease: LEUKODYSTROPHY, HYPOMYELINATING, 16
LEUKODYSTROPHY, HYPOMYELINATING, 16
0.600 GeneticVariation disease UNIPROT A recurrent de novo mutation in TMEM106B causes hypomyelinating leukodystrophy. 29186371 2017
CUI: C4693779
Disease: LEUKODYSTROPHY, HYPOMYELINATING, 16
LEUKODYSTROPHY, HYPOMYELINATING, 16
0.600 GeneticVariation disease CLINVAR The recurrent mutation in TMEM106B also causes hypomyelinating leukodystrophy in China and is a CpG hotspot. 29444210 2018
CUI: C4693779
Disease: LEUKODYSTROPHY, HYPOMYELINATING, 16
LEUKODYSTROPHY, HYPOMYELINATING, 16
0.600 GeneticVariation disease UNIPROT The recurrent mutation in TMEM106B also causes hypomyelinating leukodystrophy in China and is a CpG hotspot. 29444210 2018
CUI: C4693779
Disease: LEUKODYSTROPHY, HYPOMYELINATING, 16
LEUKODYSTROPHY, HYPOMYELINATING, 16
0.600 GeneticVariation disease CLINVAR A recurrent de novo mutation in TMEM106B causes hypomyelinating leukodystrophy. 29186371 2017
CUI: C0751072
Disease: Frontotemporal Lobar Degeneration
Frontotemporal Lobar Degeneration
0.400 GeneticVariation disease BEFREE Common variants in TMEM106B serve as a distinct risk factor for TDP-43 pathology in older persons without FTLD. 25653292 2015
CUI: C0751072
Disease: Frontotemporal Lobar Degeneration
Frontotemporal Lobar Degeneration
0.400 GeneticVariation disease BEFREE In contrast, the HpScl groups (HpScl and HpScl-AD) were more likely to exhibit genetic variants in GRN and TMEM106B that are associated with frontotemporal lobar degeneration. 24899141 2014
CUI: C0751072
Disease: Frontotemporal Lobar Degeneration
Frontotemporal Lobar Degeneration
0.400 GeneticVariation disease BEFREE Recent large genome-wide association studies have found variants in TMEM106B (top SNP rs1990622) as a strong risk factor for frontotemporal lobar degeneration. 24166182 2014
CUI: C0751072
Disease: Frontotemporal Lobar Degeneration
Frontotemporal Lobar Degeneration
0.400 GeneticVariation disease BEFREE Transmembrane Protein 106B SNP rs1990622 was recently shown to modify the risk of frontotemporal lobar degeneration with TDP-43 inclusions (FTD-TDP). 25096617 2015
CUI: C0751072
Disease: Frontotemporal Lobar Degeneration
Frontotemporal Lobar Degeneration
0.400 GeneticVariation disease BEFREE Remarkably, Tmem106b deletion from Grn<sup>-/-</sup> mice normalizes lysosomal protein levels and rescues FTLD-related behavioral abnormalities and retinal degeneration without improving lipofuscin, C1q, and microglial accumulation. 28728022 2017
CUI: C0751072
Disease: Frontotemporal Lobar Degeneration
Frontotemporal Lobar Degeneration
0.400 GeneticVariation disease BEFREE Defining the association of TMEM106B variants among frontotemporal lobar degeneration patients with GRN mutations and C9orf72 repeat expansions. 25085782 2014
CUI: C0751072
Disease: Frontotemporal Lobar Degeneration
Frontotemporal Lobar Degeneration
0.400 GeneticVariation disease BEFREE Membrane orientation and subcellular localization of transmembrane protein 106B (TMEM106B), a major risk factor for frontotemporal lobar degeneration. 22511793 2012
CUI: C0751072
Disease: Frontotemporal Lobar Degeneration
Frontotemporal Lobar Degeneration
0.400 GeneticVariation disease BEFREE We investigated the rs1990622 polymorphism in relation to regional brain volumes to identify potential structures through which TMEM106B confers risk for frontotemporal lobar degeneration. 24731779 2014
CUI: C0751072
Disease: Frontotemporal Lobar Degeneration
Frontotemporal Lobar Degeneration
0.400 GeneticVariation disease BEFREE This variant is in high LD with the TMEM106B non-synonymous variant p.T185S (rs3173615; r<sup>2</sup> = 0.98) which was previously identified as a protective variant for frontotemporal lobar degeneration (FTLD). 31456032 2020
CUI: C0751072
Disease: Frontotemporal Lobar Degeneration
Frontotemporal Lobar Degeneration
0.400 GeneticVariation disease BEFREE We further identified a significant association of TMEM106B SNPs with plasma GRN levels in controls (top SNP rs1990622, corrected p = 0.002) and in peripheral blood samples a highly significant correlation was observed between TMEM106B and GRN mRNA expression in patients with FTLD (r = -0.63, p = 7.7 × 10(-5)) and controls (r = -0.49, p = 2.2 × 10(-10)). 21178100 2011
CUI: C0751072
Disease: Frontotemporal Lobar Degeneration
Frontotemporal Lobar Degeneration
0.400 GeneticVariation disease BEFREE Homozygous carriers of the TMEM106B protective alleles had a 50% reduced risk of developing frontotemporal lobar degeneration. 21354975 2011
CUI: C0751072
Disease: Frontotemporal Lobar Degeneration
Frontotemporal Lobar Degeneration
0.400 GeneticVariation disease BEFREE Single nucleotide polymorphisms (SNPs) inherited as one of two common haplotypes at the transmembrane protein 106B (TMEM106B) locus are associated with the risk of multiple neurodegenerative diseases, including frontotemporal lobar degeneration with pathological inclusions of TDP-43. 29970152 2018
CUI: C0751072
Disease: Frontotemporal Lobar Degeneration
Frontotemporal Lobar Degeneration
0.400 GeneticVariation disease BEFREE Transmembrane protein 106B (TMEM106B) has been identified as a risk factor for frontotemporal lobar degeneration, which is the second most common form of progressive dementia in people under 65 years of age. 26651479 2015
CUI: C0751072
Disease: Frontotemporal Lobar Degeneration
Frontotemporal Lobar Degeneration
0.400 GeneticVariation disease BEFREE Rs1990622 (TMEM106B) was identified as a risk factor for frontotemporal lobar degeneration with TAR DNA-binding protein inclusions (FTLD-TDP) in a recent genome-wide association. 21220649 2011
CUI: C0338451
Disease: Frontotemporal dementia
Frontotemporal dementia
0.200 GeneticVariation disease BEFREE Polymorphisms in TMEM106B are thought to modify disease onset in frontotemporal dementia, but its relation to myelination is not understood. 29186371 2017
CUI: C0338451
Disease: Frontotemporal dementia
Frontotemporal dementia
0.200 GeneticVariation disease BEFREE Age at symptom onset in genetic FTD is variable with recently identified genetic modifiers including TMEM106B (in GRN carriers particularly) and a polymorphism at a locus containing two overlapping genes LOC101929163 and C6orf10 (in C9orf72 carriers). 31119452 2019
CUI: C0338451
Disease: Frontotemporal dementia
Frontotemporal dementia
0.200 GeneticVariation disease BEFREE In addition, the finding in the stage 1 sample that AD risk is significantly influenced by the interaction of APOE with rs1595014 in TMEM106B (P=1·6 × 10(-7)) is noteworthy, because TMEM106B variants have previously been associated with risk of frontotemporal dementia. 25778476 2016
CUI: C0338451
Disease: Frontotemporal dementia
Frontotemporal dementia
0.200 GeneticVariation disease BEFREE TMEM106B p.T185S regulates TMEM106B protein levels: implications for frontotemporal dementia. 23742080 2013
CUI: C0338451
Disease: Frontotemporal dementia
Frontotemporal dementia
0.200 GeneticVariation disease BEFREE We subsequently performed a genome-wide association study and identified the TMEM106B and GRN gene loci, previously associated with frontotemporal dementia, as determinants of Δ-aging in the cerebral cortex with genome-wide significance. 28330615 2017
CUI: C0338451
Disease: Frontotemporal dementia
Frontotemporal dementia
0.200 GeneticVariation disease BEFREE The most significant association of TMEM106B single nucleotide polymorphisms with risk of FTLD-TDP was observed in patients with progranulin (GRN) mutations. 22511793 2012
CUI: C0338451
Disease: Frontotemporal dementia
Frontotemporal dementia
0.200 GeneticVariation disease BEFREE Recent studies found that two polymorphisms (rs363371 and rs363324) in VMAT2 might be a risk factor for Parkinson's disease (PD) in Caucasians, while the two other variants (rs1990622 and rs3173615) in TMEM106B increased the risk for frontotemporal dementia (FTD). 28477711 2017