LYST, lysosomal trafficking regulator, 1130

N. diseases: 114; N. variants: 18
Source: ALL
Variant DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Disease Class Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs28942077
rs28942077
1.000 0.160 1 235766204 missense variant A/G;T snv 4.0E-06
CUI: C0007965
Disease: Chediak-Higashi Syndrome
Chediak-Higashi Syndrome
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Eye Diseases; Immune System Diseases; Hemic and Lymphatic Diseases 0.800 1.000 2 2002 2014
dbSNP: rs757222354
rs757222354
1.000 0.160 1 235775041 stop gained G/A;T snv 4.0E-06; 4.0E-06
CUI: C0007965
Disease: Chediak-Higashi Syndrome
Chediak-Higashi Syndrome
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Eye Diseases; Immune System Diseases; Hemic and Lymphatic Diseases 0.010 1.000 1 2011 2011
dbSNP: rs771549954
rs771549954
1.000 0.080 1 235812976 missense variant G/C snv 1.2E-05
CUI: C0002736
Disease: Amyotrophic Lateral Sclerosis
Amyotrophic Lateral Sclerosis
Nutritional and Metabolic Diseases; Nervous System Diseases 0.010 1.000 1 2009 2009
dbSNP: rs797044542
rs797044542
1.000 0.160 1 235664487 missense variant C/T snv
CUI: C0007965
Disease: Chediak-Higashi Syndrome
Chediak-Higashi Syndrome
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Eye Diseases; Immune System Diseases; Hemic and Lymphatic Diseases 0.010 1.000 1 2014 2014
dbSNP: rs80338651
rs80338651
1.000 0.160 1 235806051 stop gained G/A snv
CUI: C0007965
Disease: Chediak-Higashi Syndrome
Chediak-Higashi Syndrome
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Eye Diseases; Immune System Diseases; Hemic and Lymphatic Diseases 0.710 1.000 1 1997 1997
dbSNP: rs28942077
rs28942077
1.000 0.160 1 235766204 missense variant A/G;T snv 4.0E-06
CHEDIAK-HIGASHI SYNDROME, ADULT TYPE
0.700 0
dbSNP: rs80338642
rs80338642
1.000 0.160 1 235830299 frameshift variant -/C delins 8.4E-05
CUI: C0007965
Disease: Chediak-Higashi Syndrome
Chediak-Higashi Syndrome
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Eye Diseases; Immune System Diseases; Hemic and Lymphatic Diseases 0.700 0
dbSNP: rs80338642
rs80338642
1.000 0.160 1 235830299 frameshift variant -/C delins 8.4E-05
CHEDIAK-HIGASHI SYNDROME, CHILDHOOD TYPE
0.700 0
dbSNP: rs80338643
rs80338643
1.000 0.160 1 235830270 stop gained G/A;C snv 4.0E-06
CHEDIAK-HIGASHI SYNDROME, CHILDHOOD TYPE
0.700 0
dbSNP: rs80338643
rs80338643
1.000 0.160 1 235830270 stop gained G/A;C snv 4.0E-06
CUI: C0007965
Disease: Chediak-Higashi Syndrome
Chediak-Higashi Syndrome
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Eye Diseases; Immune System Diseases; Hemic and Lymphatic Diseases 0.700 0
dbSNP: rs80338644
rs80338644
1.000 0.160 1 235809351 frameshift variant C/- del
CUI: C0007965
Disease: Chediak-Higashi Syndrome
Chediak-Higashi Syndrome
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Eye Diseases; Immune System Diseases; Hemic and Lymphatic Diseases 0.700 0
dbSNP: rs80338644
rs80338644
1.000 0.160 1 235809351 frameshift variant C/- del
CHEDIAK-HIGASHI SYNDROME, CHILDHOOD TYPE
0.700 0
dbSNP: rs80338646
rs80338646
1.000 0.160 1 235808916 frameshift variant T/-;TT delins
CHEDIAK-HIGASHI SYNDROME, CHILDHOOD TYPE
0.700 0
dbSNP: rs80338646
rs80338646
1.000 0.160 1 235808916 frameshift variant T/-;TT delins
CUI: C0007965
Disease: Chediak-Higashi Syndrome
Chediak-Higashi Syndrome
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Eye Diseases; Immune System Diseases; Hemic and Lymphatic Diseases 0.700 0
dbSNP: rs80338649
rs80338649
1.000 0.160 1 235806513 frameshift variant A/- delins
CUI: C0007965
Disease: Chediak-Higashi Syndrome
Chediak-Higashi Syndrome
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Eye Diseases; Immune System Diseases; Hemic and Lymphatic Diseases 0.700 0
dbSNP: rs80338649
rs80338649
1.000 0.160 1 235806513 frameshift variant A/- delins
CHEDIAK-HIGASHI SYNDROME, CHILDHOOD TYPE
0.700 0
dbSNP: rs80338651
rs80338651
1.000 0.160 1 235806051 stop gained G/A snv
CHEDIAK-HIGASHI SYNDROME, CHILDHOOD TYPE
0.700 0
dbSNP: rs80338657
rs80338657
1.000 0.160 1 235788701 missense variant C/T snv
CHEDIAK-HIGASHI SYNDROME, ADULT TYPE
0.700 0
dbSNP: rs80338657
rs80338657
1.000 0.160 1 235788701 missense variant C/T snv
CUI: C0007965
Disease: Chediak-Higashi Syndrome
Chediak-Higashi Syndrome
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Eye Diseases; Immune System Diseases; Hemic and Lymphatic Diseases 0.700 0
dbSNP: rs80338667
rs80338667
1.000 0.160 1 235716749 frameshift variant T/- del
CUI: C0007965
Disease: Chediak-Higashi Syndrome
Chediak-Higashi Syndrome
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Eye Diseases; Immune System Diseases; Hemic and Lymphatic Diseases 0.700 0
dbSNP: rs80338667
rs80338667
1.000 0.160 1 235716749 frameshift variant T/- del
CHEDIAK-HIGASHI SYNDROME, CHILDHOOD TYPE
0.700 0
dbSNP: rs864309530
rs864309530
1 235806165 missense variant G/T snv
CUI: C0239998
Disease: Recurrent infections
Recurrent infections
Pathological Conditions, Signs and Symptoms; Infections; Musculoskeletal Diseases 0.700 0
dbSNP: rs864309530
rs864309530
1 235806165 missense variant G/T snv
CUI: C0423798
Disease: Increased tendency to bruise
Increased tendency to bruise
Wounds and Injuries 0.700 0
dbSNP: rs864309530
rs864309530
1 235806165 missense variant G/T snv
CUI: C0015967
Disease: Fever
Fever
Pathological Conditions, Signs and Symptoms 0.700 0
dbSNP: rs80338652
rs80338652
1.000 0.160 1 235805826 stop gained G/A snv 1.2E-05 1.4E-05
CUI: C0007965
Disease: Chediak-Higashi Syndrome
Chediak-Higashi Syndrome
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Eye Diseases; Immune System Diseases; Hemic and Lymphatic Diseases 0.710 1.000 5 1996 2017