COL1A1, collagen type I alpha 1 chain, 1277

N. diseases: 487; N. variants: 337
Source: ALL
Variant DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Disease Class Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs116794104
rs116794104
1.000 0.120 17 50195466 missense variant C/T snv 1.0E-03 4.2E-03
Osteogenesis imperfecta, dominant perinatal lethal
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Skin and Connective Tissue Diseases; Musculoskeletal Diseases 0.700 1.000 20 1986 2015
dbSNP: rs1555573789
rs1555573789
17 50194591 frameshift variant AT/- del
CUI: C0026827
Disease: Muscle hypotonia
Muscle hypotonia
Pathological Conditions, Signs and Symptoms; Nervous System Diseases 0.700 1.000 20 1957 2017
dbSNP: rs1555575085
rs1555575085
1.000 17 50199309 missense variant C/A snv
CUI: C0432072
Disease: Dysmorphic features
Dysmorphic features
0.700 1.000 20 1957 2017
dbSNP: rs1555575085
rs1555575085
1.000 17 50199309 missense variant C/A snv
CUI: C0026827
Disease: Muscle hypotonia
Muscle hypotonia
Pathological Conditions, Signs and Symptoms; Nervous System Diseases 0.700 1.000 20 1957 2017
dbSNP: rs57377812
rs57377812
1.000 0.120 17 50194756 missense variant C/G;T snv
Osteogenesis imperfecta, dominant perinatal lethal
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Skin and Connective Tissue Diseases; Musculoskeletal Diseases 0.700 1.000 20 1986 2015
dbSNP: rs66929517
rs66929517
0.925 0.120 17 50190334 missense variant C/A;G snv
Osteogenesis imperfecta, dominant perinatal lethal
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Skin and Connective Tissue Diseases; Musculoskeletal Diseases 0.700 1.000 20 1986 2015
dbSNP: rs66948146
rs66948146
1.000 0.120 17 50186894 missense variant C/A snv
Osteogenesis imperfecta, dominant perinatal lethal
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Skin and Connective Tissue Diseases; Musculoskeletal Diseases 0.700 1.000 20 1986 2015
dbSNP: rs67067133
rs67067133
1.000 0.120 17 50190062 missense variant C/A;T snv
Osteogenesis imperfecta, dominant perinatal lethal
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Skin and Connective Tissue Diseases; Musculoskeletal Diseases 0.700 1.000 20 1986 2015
dbSNP: rs67507747
rs67507747
0.827 0.160 17 50194032 missense variant C/A;G;T snv
Osteogenesis imperfecta, dominant perinatal lethal
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Skin and Connective Tissue Diseases; Musculoskeletal Diseases 0.700 1.000 20 1986 2015
dbSNP: rs67771061
rs67771061
0.925 0.120 17 50188776 missense variant C/A;G;T snv
Osteogenesis imperfecta, dominant perinatal lethal
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Skin and Connective Tissue Diseases; Musculoskeletal Diseases 0.700 1.000 20 1986 2015
dbSNP: rs72645333
rs72645333
0.925 0.120 17 50196651 missense variant C/T snv
Osteogenesis imperfecta, dominant perinatal lethal
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Skin and Connective Tissue Diseases; Musculoskeletal Diseases 0.700 1.000 20 1986 2015
dbSNP: rs72648328
rs72648328
1.000 0.120 17 50195267 missense variant C/A snv
Osteogenesis imperfecta, dominant perinatal lethal
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Skin and Connective Tissue Diseases; Musculoskeletal Diseases 0.700 1.000 20 1986 2015
dbSNP: rs72648330
rs72648330
1.000 0.120 17 50195258 missense variant C/T snv
Osteogenesis imperfecta, dominant perinatal lethal
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Skin and Connective Tissue Diseases; Musculoskeletal Diseases 0.700 1.000 20 1986 2015
dbSNP: rs72648333
rs72648333
0.925 0.120 17 50195099 missense variant C/A snv
Osteogenesis imperfecta, dominant perinatal lethal
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Skin and Connective Tissue Diseases; Musculoskeletal Diseases 0.700 1.000 20 1986 2015
dbSNP: rs72648356
rs72648356
0.925 0.120 17 50194365 missense variant C/T snv
Osteogenesis imperfecta, dominant perinatal lethal
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Skin and Connective Tissue Diseases; Musculoskeletal Diseases 0.700 1.000 20 1986 2015
dbSNP: rs72648363
rs72648363
0.925 0.120 17 50194005 missense variant C/G snv
Osteogenesis imperfecta, dominant perinatal lethal
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Skin and Connective Tissue Diseases; Musculoskeletal Diseases 0.700 1.000 20 1986 2015
dbSNP: rs72648366
rs72648366
1.000 0.120 17 50193969 missense variant C/T snv
Osteogenesis imperfecta, dominant perinatal lethal
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Skin and Connective Tissue Diseases; Musculoskeletal Diseases 0.700 1.000 20 1986 2015
dbSNP: rs72651615
rs72651615
1.000 0.120 17 50193011 missense variant C/T snv
Osteogenesis imperfecta, dominant perinatal lethal
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Skin and Connective Tissue Diseases; Musculoskeletal Diseases 0.700 1.000 20 1986 2015
dbSNP: rs72651629
rs72651629
1.000 0.120 17 50192492 missense variant C/T snv
Osteogenesis imperfecta, dominant perinatal lethal
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Skin and Connective Tissue Diseases; Musculoskeletal Diseases 0.700 1.000 20 1986 2015
dbSNP: rs72651646
rs72651646
0.925 0.120 17 50191462 missense variant C/T snv
Osteogenesis imperfecta, dominant perinatal lethal
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Skin and Connective Tissue Diseases; Musculoskeletal Diseases 0.700 1.000 20 1986 2015
dbSNP: rs72651648
rs72651648
1.000 0.120 17 50191436 missense variant C/T snv
Osteogenesis imperfecta, dominant perinatal lethal
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Skin and Connective Tissue Diseases; Musculoskeletal Diseases 0.700 1.000 20 1986 2015
dbSNP: rs72651649
rs72651649
1.000 0.120 17 50191417 missense variant C/A snv
Osteogenesis imperfecta, dominant perinatal lethal
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Skin and Connective Tissue Diseases; Musculoskeletal Diseases 0.700 1.000 20 1986 2015
dbSNP: rs72651651
rs72651651
0.925 0.120 17 50191408 missense variant C/G;T snv
Osteogenesis imperfecta, dominant perinatal lethal
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Skin and Connective Tissue Diseases; Musculoskeletal Diseases 0.700 1.000 20 1986 2015
dbSNP: rs72651652
rs72651652
1.000 0.120 17 50191391 missense variant C/T snv
Osteogenesis imperfecta, dominant perinatal lethal
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Skin and Connective Tissue Diseases; Musculoskeletal Diseases 0.700 1.000 20 1986 2015
dbSNP: rs72651653
rs72651653
0.925 0.120 17 50191390 missense variant C/A snv
Osteogenesis imperfecta, dominant perinatal lethal
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Skin and Connective Tissue Diseases; Musculoskeletal Diseases 0.700 1.000 20 1986 2015