Source: ALL
Variant DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Disease Class Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs1478477850
rs1478477850
9 124500181 missense variant G/A;T snv 4.1E-06; 4.1E-06
CUI: C2930619
Disease: Sex Differentiation Disorders
Sex Differentiation Disorders
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Female Urogenital Diseases and Pregnancy Complications; Male Urogenital Diseases; Endocrine System Diseases 0.010 1.000 1 2019 2019
dbSNP: rs201095702
rs201095702
1.000 9 124500326 missense variant C/T snv 1.3E-04 7.0E-05
CUI: C3151406
Disease: SPERMATOGENIC FAILURE 8
SPERMATOGENIC FAILURE 8
0.800 1.000 1 2010 2010
dbSNP: rs2297605
rs2297605
9 124493169 intron variant G/A;C;T snv 0.49; 3.7E-05; 8.2E-06
CUI: C1314691
Disease: Age at menarche
Age at menarche
Behavior and Behavior Mechanisms 0.700 1.000 1 2019 2019
dbSNP: rs387906690
rs387906690
1.000 9 124500568 missense variant G/A snv 6.2E-05 2.1E-05
CUI: C3151406
Disease: SPERMATOGENIC FAILURE 8
SPERMATOGENIC FAILURE 8
0.800 1.000 1 2010 2010
dbSNP: rs780568525
rs780568525
1.000 9 124500248 missense variant C/A;T snv 6.9E-05
CUI: C3151406
Disease: SPERMATOGENIC FAILURE 8
SPERMATOGENIC FAILURE 8
0.700 1.000 1 2010 2010
dbSNP: rs1253324106
rs1253324106
1.000 9 124500389 missense variant G/A snv 1.3E-05 7.0E-06
CUI: C3151406
Disease: SPERMATOGENIC FAILURE 8
SPERMATOGENIC FAILURE 8
0.700 0
dbSNP: rs104894118
rs104894118
0.882 0.080 9 124500196 missense variant C/A;T snv 1.6E-05; 4.1E-06
PREMATURE OVARIAN FAILURE 7 (disorder)
Female Urogenital Diseases and Pregnancy Complications; Endocrine System Diseases 0.700 1.000 2 2000 2016
dbSNP: rs104894118
rs104894118
0.882 0.080 9 124500196 missense variant C/A;T snv 1.6E-05; 4.1E-06
CUI: C0001623
Disease: Adrenal gland hypofunction
Adrenal gland hypofunction
Endocrine System Diseases 0.010 1.000 1 2000 2000
dbSNP: rs104894118
rs104894118
0.882 0.080 9 124500196 missense variant C/A;T snv 1.6E-05; 4.1E-06
CUI: C0405580
Disease: Adrenal cortical hypofunction
Adrenal cortical hypofunction
Endocrine System Diseases 0.010 1.000 1 2000 2000
dbSNP: rs141502483
rs141502483
0.925 0.080 9 124500191 missense variant C/T snv 3.3E-05 2.8E-05
CUI: C0085215
Disease: Ovarian Failure, Premature
Ovarian Failure, Premature
Female Urogenital Diseases and Pregnancy Complications; Endocrine System Diseases 0.010 < 0.001 1 2002 2002
dbSNP: rs141502483
rs141502483
0.925 0.080 9 124500191 missense variant C/T snv 3.3E-05 2.8E-05
CUI: C0025322
Disease: Premature Menopause
Premature Menopause
Female Urogenital Diseases and Pregnancy Complications 0.010 < 0.001 1 2002 2002
dbSNP: rs200749741
rs200749741
0.925 0.080 9 124500574 missense variant G/A snv 2.3E-04 9.3E-04
PREMATURE OVARIAN FAILURE 7 (disorder)
Female Urogenital Diseases and Pregnancy Complications; Endocrine System Diseases 0.700 1.000 1 2009 2009
dbSNP: rs200749741
rs200749741
0.925 0.080 9 124500574 missense variant G/A snv 2.3E-04 9.3E-04
CUI: C3151406
Disease: SPERMATOGENIC FAILURE 8
SPERMATOGENIC FAILURE 8
0.700 1.000 1 2010 2010
dbSNP: rs104894118
rs104894118
0.882 0.080 9 124500196 missense variant C/A;T snv 1.6E-05; 4.1E-06
ADRENAL INSUFFICIENCY, NR5A1-RELATED
0.700 0
dbSNP: rs200163795
rs200163795
0.925 0.080 9 124500592 missense variant C/G;T snv 2.3E-04; 4.1E-06
CUI: C3151406
Disease: SPERMATOGENIC FAILURE 8
SPERMATOGENIC FAILURE 8
0.700 0
dbSNP: rs200163795
rs200163795
0.925 0.080 9 124500592 missense variant C/G;T snv 2.3E-04; 4.1E-06
PREMATURE OVARIAN FAILURE 7 (disorder)
Female Urogenital Diseases and Pregnancy Complications; Endocrine System Diseases 0.700 0
dbSNP: rs606231208
rs606231208
1.000 0.080 9 124500261 splice acceptor variant CAGCTGCAG/- delins
PREMATURE OVARIAN FAILURE 7 (disorder)
Female Urogenital Diseases and Pregnancy Complications; Endocrine System Diseases 0.700 0
dbSNP: rs1064794281
rs1064794281
0.925 0.120 9 124500125 missense variant A/T snv
CUI: C0848558
Disease: Hypospadias
Hypospadias
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Female Urogenital Diseases and Pregnancy Complications; Male Urogenital Diseases 0.010 1.000 1 2011 2011
dbSNP: rs1064794281
rs1064794281
0.925 0.120 9 124500125 missense variant A/T snv
CUI: C1691215
Disease: Penile hypospadias
Penile hypospadias
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Female Urogenital Diseases and Pregnancy Complications; Male Urogenital Diseases 0.010 1.000 1 2011 2011
dbSNP: rs1110062
rs1110062
0.925 0.120 9 124500585 synonymous variant C/A;T snv 2.2E-02
CUI: C1691215
Disease: Penile hypospadias
Penile hypospadias
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Female Urogenital Diseases and Pregnancy Complications; Male Urogenital Diseases 0.010 1.000 1 2012 2012
dbSNP: rs1110062
rs1110062
0.925 0.120 9 124500585 synonymous variant C/A;T snv 2.2E-02
CUI: C0848558
Disease: Hypospadias
Hypospadias
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Female Urogenital Diseases and Pregnancy Complications; Male Urogenital Diseases 0.010 1.000 1 2012 2012
dbSNP: rs1213451480
rs1213451480
1.000 0.120 9 124500652 missense variant C/T snv
CUI: C0600031
Disease: Congenital absence of spleen
Congenital absence of spleen
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Digestive System Diseases; Hemic and Lymphatic Diseases 0.010 1.000 1 2014 2014
dbSNP: rs1213451480
rs1213451480
1.000 0.120 9 124500652 missense variant C/T snv
CUI: C2751824
Disease: 46, XY Disorders of Sex Development
46, XY Disorders of Sex Development
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Female Urogenital Diseases and Pregnancy Complications; Male Urogenital Diseases; Endocrine System Diseases 0.010 1.000 1 2014 2014
dbSNP: rs745564225
rs745564225
0.925 0.120 9 124493110 missense variant C/T snv 4.0E-06 7.0E-06
CUI: C0848558
Disease: Hypospadias
Hypospadias
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Female Urogenital Diseases and Pregnancy Complications; Male Urogenital Diseases 0.010 1.000 1 2015 2015
dbSNP: rs745564225
rs745564225
0.925 0.120 9 124493110 missense variant C/T snv 4.0E-06 7.0E-06
CUI: C1691215
Disease: Penile hypospadias
Penile hypospadias
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Female Urogenital Diseases and Pregnancy Complications; Male Urogenital Diseases 0.010 1.000 1 2015 2015