BAP1, BRCA1 associated protein 1, 8314

N. diseases: 299; N. variants: 72
Source: ALL
Variant DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Disease Class Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs869025212
rs869025212
0.827 0.200 3 52403428 frameshift variant G/- delins
CUI: C0027672
Disease: Neoplastic Syndromes, Hereditary
Neoplastic Syndromes, Hereditary
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Neoplasms 0.700 1.000 5 2011 2016
dbSNP: rs1559586374
rs1559586374
1.000 3 52403415 splice donor variant C/- delins
CUI: C3280492
Disease: TUMOR PREDISPOSITION SYNDROME
TUMOR PREDISPOSITION SYNDROME
0.700 1.000 3 2011 2016
dbSNP: rs869025212
rs869025212
0.827 0.200 3 52403428 frameshift variant G/- delins
CUI: C3280492
Disease: TUMOR PREDISPOSITION SYNDROME
TUMOR PREDISPOSITION SYNDROME
0.700 1.000 3 2011 2015
dbSNP: rs1060503735
rs1060503735
1.000 3 52409716 frameshift variant A/- delins
CUI: C3280492
Disease: TUMOR PREDISPOSITION SYNDROME
TUMOR PREDISPOSITION SYNDROME
0.700 1.000 2 2011 2013
dbSNP: rs112194987
rs112194987
1.000 3 52405296 splice acceptor variant T/A;C snv
CUI: C3280492
Disease: TUMOR PREDISPOSITION SYNDROME
TUMOR PREDISPOSITION SYNDROME
0.700 1.000 2 2011 2013
dbSNP: rs1553644659
rs1553644659
1.000 3 52402787 stop gained T/A snv
CUI: C3280492
Disease: TUMOR PREDISPOSITION SYNDROME
TUMOR PREDISPOSITION SYNDROME
0.700 1.000 2 2012 2015
dbSNP: rs1553645164
rs1553645164
1.000 3 52404550 stop gained G/A snv
CUI: C0027672
Disease: Neoplastic Syndromes, Hereditary
Neoplastic Syndromes, Hereditary
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Neoplasms 0.700 1.000 2 2012 2016
dbSNP: rs1553645729
rs1553645729
1.000 3 52406908 splice acceptor variant C/A;T snv
CUI: C3280492
Disease: TUMOR PREDISPOSITION SYNDROME
TUMOR PREDISPOSITION SYNDROME
0.700 1.000 2 2011 2013
dbSNP: rs1553645838
rs1553645838
1.000 3 52407398 splice donor variant C/A snv
CUI: C3280492
Disease: TUMOR PREDISPOSITION SYNDROME
TUMOR PREDISPOSITION SYNDROME
0.700 1.000 2 2011 2013
dbSNP: rs1559586168
rs1559586168
1.000 3 52403299 splice acceptor variant C/T snv
CUI: C3280492
Disease: TUMOR PREDISPOSITION SYNDROME
TUMOR PREDISPOSITION SYNDROME
0.700 1.000 2 2011 2013
dbSNP: rs1559589809
rs1559589809
1.000 3 52406378 splice acceptor variant T/C snv
CUI: C3280492
Disease: TUMOR PREDISPOSITION SYNDROME
TUMOR PREDISPOSITION SYNDROME
0.700 1.000 2 2011 2013
dbSNP: rs1559591511
rs1559591511
1.000 3 52408459 splice donor variant CAGAGTCCAGCAGACCT/- del
CUI: C3280492
Disease: TUMOR PREDISPOSITION SYNDROME
TUMOR PREDISPOSITION SYNDROME
0.700 1.000 2 2011 2013
dbSNP: rs1559593339
rs1559593339
1.000 3 52409841 splice donor variant C/A snv
CUI: C3280492
Disease: TUMOR PREDISPOSITION SYNDROME
TUMOR PREDISPOSITION SYNDROME
0.700 1.000 2 2011 2013
dbSNP: rs1064795638
rs1064795638
0.851 0.080 3 52403251 stop gained G/A snv
CUI: C0007115
Disease: Malignant neoplasm of thyroid
Malignant neoplasm of thyroid
Neoplasms; Endocrine System Diseases 0.010 1.000 1 2016 2016
dbSNP: rs1064795638
rs1064795638
0.851 0.080 3 52403251 stop gained G/A snv
CUI: C0006826
Disease: Malignant Neoplasms
Malignant Neoplasms
Neoplasms 0.010 1.000 1 2016 2016
dbSNP: rs1064795638
rs1064795638
0.851 0.080 3 52403251 stop gained G/A snv
CUI: C0027651
Disease: Neoplasms
Neoplasms
Neoplasms 0.010 1.000 1 2016 2016
dbSNP: rs1064795638
rs1064795638
0.851 0.080 3 52403251 stop gained G/A snv
CUI: C0040136
Disease: Thyroid Neoplasm
Thyroid Neoplasm
Neoplasms; Endocrine System Diseases 0.010 1.000 1 2016 2016
dbSNP: rs1064795638
rs1064795638
0.851 0.080 3 52403251 stop gained G/A snv
CUI: C0549473
Disease: Thyroid carcinoma
Thyroid carcinoma
Neoplasms; Endocrine System Diseases 0.010 1.000 1 2016 2016
dbSNP: rs1064795638
rs1064795638
0.851 0.080 3 52403251 stop gained G/A snv
CUI: C1306459
Disease: Primary malignant neoplasm
Primary malignant neoplasm
Neoplasms 0.010 1.000 1 2016 2016
dbSNP: rs1253151209
rs1253151209
1.000 3 52408551 stop gained G/A;T snv 7.0E-06
CUI: C3280492
Disease: TUMOR PREDISPOSITION SYNDROME
TUMOR PREDISPOSITION SYNDROME
0.700 1.000 1 2012 2012
dbSNP: rs1553645720
rs1553645720
1.000 3 52406896 stop gained C/A snv
CUI: C3280492
Disease: TUMOR PREDISPOSITION SYNDROME
TUMOR PREDISPOSITION SYNDROME
0.700 1.000 1 2015 2015
dbSNP: rs1553645809
rs1553645809
1.000 3 52407243 frameshift variant -/A delins
CUI: C3280492
Disease: TUMOR PREDISPOSITION SYNDROME
TUMOR PREDISPOSITION SYNDROME
0.700 1.000 1 2015 2015
dbSNP: rs387906849
rs387906849
0.925 0.080 3 52405897 stop gained G/A snv
CUI: C0220633
Disease: Uveal melanoma
Uveal melanoma
Neoplasms; Eye Diseases 0.010 1.000 1 2011 2011
dbSNP: rs397509413
rs397509413
1.000 3 52409597 frameshift variant CC/-;CCC delins
CUI: C0027672
Disease: Neoplastic Syndromes, Hereditary
Neoplastic Syndromes, Hereditary
Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Neoplasms 0.700 1.000 1 2013 2013
dbSNP: rs869025212
rs869025212
0.827 0.200 3 52403428 frameshift variant G/- delins
CUI: C0345967
Disease: Malignant mesothelioma
Malignant mesothelioma
Neoplasms; Respiratory Tract Diseases 0.700 1.000 1 2015 2015