CST3, cystatin C, 1471

N. diseases: 370; N. variants: 10
Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs1064039
rs1064039
Entrez Id: 1471
Gene Symbol: CST3
CST3
CUI: C2677774
Disease:
Age-Related Macular Degeneration type 11
0.800 GeneticVariation UNIPROT
dbSNP: rs1064039
rs1064039
Entrez Id: 1471
Gene Symbol: CST3
CST3
CUI: C2677774
Disease:
Age-Related Macular Degeneration type 11
T 0.800 CausalMutation CLINVAR
dbSNP: rs1064039
rs1064039
Entrez Id: 1471
Gene Symbol: CST3
CST3
CUI: C0002395
Disease:
Alzheimer's Disease
0.040 GeneticVariation BEFREE The G73A polymorphism of the CST3 genemay be associated with AD development. 18408364 2008
dbSNP: rs1064039
rs1064039
Entrez Id: 1471
Gene Symbol: CST3
CST3
CUI: C0002395
Disease:
Alzheimer's Disease
0.040 GeneticVariation BEFREE Recent studies have reported a genetic association between the 73 G/A polymorphism within exon 1 of the cystatin C gene and Alzheimer's disease (AD) with conflicting results. 16188386 2006
dbSNP: rs1064039
rs1064039
Entrez Id: 1471
Gene Symbol: CST3
CST3
CUI: C0002395
Disease:
Alzheimer's Disease
0.040 GeneticVariation BEFREE The CST3 G73A polymorphism is associated with AD in Caucasian populations, but not in Asians. 22435454 2012
dbSNP: rs1064039
rs1064039
Entrez Id: 1471
Gene Symbol: CST3
CST3
CUI: C0002395
Disease:
Alzheimer's Disease
0.040 GeneticVariation BEFREE Here, we strengthen the evidence that an nsSNP (p.Ala25Thr) in the cysteine proteinase inhibitor cystatin C gene CST3, previously confirmed by meta-analysis to be associated with AD, is associated with exudative AMD. 25893795 2015
dbSNP: rs1064039
rs1064039
Entrez Id: 1471
Gene Symbol: CST3
CST3
CUI: C0242383
Disease:
Age related macular degeneration
0.010 GeneticVariation BEFREE Here, we strengthen the evidence that an nsSNP (p.Ala25Thr) in the cysteine proteinase inhibitor cystatin C gene CST3, previously confirmed by meta-analysis to be associated with AD, is associated with exudative AMD. 25893795 2015
dbSNP: rs1064039
rs1064039
Entrez Id: 1471
Gene Symbol: CST3
CST3
CUI: C0271084
Disease:
Exudative age-related macular degeneration
0.010 GeneticVariation BEFREE Targeting of cystatin C to the Golgi apparatus and processing through the secretory pathway of RPE cells are dependent upon a 26-amino acid signal sequence of precursor cystatin C. A variant with an alanine (A) to threonine (T) mutation in the penultimate amino acid of the signal sequence (A25T) was recently correlated with increased risk of developing exudative age-related macular degeneration. 15479453 2004
dbSNP: rs1064039
rs1064039
Entrez Id: 1471
Gene Symbol: CST3
CST3
CUI: C0155626
Disease:
Acute myocardial infarction
0.010 GeneticVariation BEFREE Cystatin C levels are decreased in acute myocardial infarction: effect of cystatin C G73A gene polymorphism on plasma levels. 15882666 2005
dbSNP: rs1064039
rs1064039
Entrez Id: 1471
Gene Symbol: CST3
CST3
CUI: C0027765
Disease:
nervous system disorder
0.010 GeneticVariation BEFREE Quantification of cystatin C in cerebrospinal fluid from various neurological disorders and correlation with G73A polymorphism in CST3. 20849835 2010
dbSNP: rs13038305
rs13038305
Entrez Id: 1471
Gene Symbol: CST3
CST3
CUI: C0011847
Disease:
Diabetes
0.010 GeneticVariation BEFREE In the entire MDC-CC-re-exam the odds ratio for incident MetS and diabetes per copy of the major rs13038305 allele was 1.13, (0.95-1.34), p = 0.160 and 1.07, 95% CI 0.89-1.30, p = 0.478, respectively. 27218257 2016
dbSNP: rs13038305
rs13038305
Entrez Id: 1471
Gene Symbol: CST3
CST3
CUI: C1561643
Disease:
Chronic Kidney Diseases
0.010 GeneticVariation BEFREE In 14,645 participants, each copy of the T allele of rs13038305 (frequency, 21%) was associated with a 6.4% lower cystatin C concentration, 5.5-mL/min/1.73 m(2) higher eGFRcys, and 36% [95% CI, 29%-41%] lower odds of CKD. 23932088 2014
dbSNP: rs13038305
rs13038305
Entrez Id: 1471
Gene Symbol: CST3
CST3
CUI: C0007222
Disease:
Cardiovascular Diseases
0.010 GeneticVariation BEFREE Associations with CVD (HR, 1.17; 95% CI, 1.14-1.20) and mortality (HR, 1.22; 95% CI, 1.19-1.24) per 10-mL/min/1.73 m(2) lower eGFRcys were similar with or without rs13038305 adjustment. 23932088 2014
dbSNP: rs13038305
rs13038305
Entrez Id: 1471
Gene Symbol: CST3
CST3
CUI: C0524620
Disease:
Metabolic Syndrome X
0.010 GeneticVariation BEFREE The association of rs13038305 and incident MetS (511 cases of MetS and 1980 controls) was similarly investigated in the whole MDC-CC-re-exam. 27218257 2016
dbSNP: rs13038305
rs13038305
Entrez Id: 1471
Gene Symbol: CST3
CST3
CUI: C0011849
Disease:
Diabetes Mellitus
0.010 GeneticVariation BEFREE In the entire MDC-CC-re-exam the odds ratio for incident MetS and diabetes per copy of the major rs13038305 allele was 1.13, (0.95-1.34), p = 0.160 and 1.07, 95% CI 0.89-1.30, p = 0.478, respectively. 27218257 2016
dbSNP: rs2424577
rs2424577
Entrez Id: 1471
Gene Symbol: CST3
CST3
CUI: C0036341
Disease:
Schizophrenia
0.010 GeneticVariation BEFREE Significant SNPxDiagnosis interactions were identified for eight serum proteins including Factor-VII[rs555212], Alpha-1-Antitrypsin[rs11846959], Interferon-Gamma Induced Protein 10[rs4256246] and von-Willebrand-Factor[rs12829220] in the control group; Chromogranin-A[rs9658644], Cystatin-C[rs2424577] and Vitamin K-Dependent Protein S[rs6123] in the schizophrenia group; Interleukin-6 receptor[rs7553796] in both the control and schizophrenia groups. 28974776 2017
dbSNP: rs28939068
rs28939068
Entrez Id: 1471
Gene Symbol: CST3
CST3
CUI: C1527338
Disease:
Hereditary Cerebral Amyloid Angiopathy, Icelandic Type
0.810 GeneticVariation UNIPROT Stroke in Icelandic patients with hereditary amyloid angiopathy is related to a mutation in the cystatin C gene, an inhibitor of cysteine proteases. 2541223 1989
dbSNP: rs28939068
rs28939068
Entrez Id: 1471
Gene Symbol: CST3
CST3
CUI: C1527338
Disease:
Hereditary Cerebral Amyloid Angiopathy, Icelandic Type
0.810 GeneticVariation UNIPROT Hereditary cystatin C amyloid angiopathy: identification of the disease-causing mutation and specific diagnosis by polymerase chain reaction based analysis. 1352269 1992
dbSNP: rs28939068
rs28939068
Entrez Id: 1471
Gene Symbol: CST3
CST3
CUI: C1527338
Disease:
Hereditary Cerebral Amyloid Angiopathy, Icelandic Type
T 0.810 CausalMutation CLINVAR
dbSNP: rs28939068
rs28939068
Entrez Id: 1471
Gene Symbol: CST3
CST3
CUI: C1527338
Disease:
Hereditary Cerebral Amyloid Angiopathy, Icelandic Type
0.810 GeneticVariation BEFREE However, the amyloid in HCHWA-I is made from a variant of cystatin C (L68Q) instead of the more common Abeta. 17963746 2007
dbSNP: rs28939068
rs28939068
Entrez Id: 1471
Gene Symbol: CST3
CST3
CUI: C1527338
Disease:
Hereditary Cerebral Amyloid Angiopathy, Icelandic Type
0.810 GeneticVariation UNIPROT EFNS guidelines on the molecular diagnosis of channelopathies, epilepsies, migraine, stroke, and dementias. 20298421 2010
dbSNP: rs28939068
rs28939068
Entrez Id: 1471
Gene Symbol: CST3
CST3
CUI: C3839957
Disease:
Hereditary cystatin C amyloid angiopathy
0.090 GeneticVariation BEFREE The development of HCCAA is directly linked to a Leu-68-->Gln (L68Q</span>) mutation in the cystatin C protein sequence. 9445375 1998
dbSNP: rs28939068
rs28939068
Entrez Id: 1471
Gene Symbol: CST3
CST3
CUI: C3839957
Disease:
Hereditary cystatin C amyloid angiopathy
0.090 GeneticVariation BEFREE Hereditary cystatin C amyloid angiopathy is an autosomal dominant disorder in which a variant form of cystatin C (L68Q) readily forms amyloid deposits in cerebral arteries in affected individuals resulting in early death. 24500719 2014
dbSNP: rs28939068
rs28939068
Entrez Id: 1471
Gene Symbol: CST3
CST3
CUI: C3839957
Disease:
Hereditary cystatin C amyloid angiopathy
0.090 GeneticVariation BEFREE The resulting intracellular accumulation and increased localised concentration of L68Q cystatin C might be an important event in the molecular pathophysiology of amyloid formation and brain haemorrhage in patients with HCCAA. 10193512 1998
dbSNP: rs28939068
rs28939068
Entrez Id: 1471
Gene Symbol: CST3
CST3
CUI: C3839957
Disease:
Hereditary cystatin C amyloid angiopathy
0.090 GeneticVariation BEFREE Clones overexpressing the two variants showed increased secreted levels of cystatin C. Within the cells the L68Q variant appeared to mainly localise to the endoplasmic reticulum rather than to acidic vesicular organelles, indicating limitations in the transport out from the cell rather than increased uptake as explanation for the elevated cellular cystatin levels seen in hereditary cystatin C amyloid angiopathy. 20800088 2010