PRKD2, protein kinase D2, 25865

N. diseases: 40; N. variants: 12
Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs11083846
rs11083846
Entrez Id: 25865
Gene Symbol: PRKD2
PRKD2
CUI: C0023434
Disease:
Chronic Lymphocytic Leukemia
0.830 GeneticVariation BEFREE Common single nucleotide polymorphisms (SNPs) at 2q13 (rs17483466), 2q37.1 (rs13397985), 2q37.3 (rs757978), 6p25.3 (rs872071), 8q24.21 (rs2456449), 11q24.1 (rs735665), 15q21.3 (rs7169431), 15q23 (rs7176508), 16q24.1 (rs305061), and 19q13.32 (rs11083846) have been shown to confer a modest but significant increase in CLL risk. 20855867 2010
dbSNP: rs11083846
rs11083846
Entrez Id: 25865
Gene Symbol: PRKD2
PRKD2
CUI: C0023434
Disease:
Chronic Lymphocytic Leukemia
0.830 GeneticVariation BEFREE Combined data provided statistically significant support for an association between genotypes at rs13397985, rs872071, rs735665, rs7176508 and rs11083846 and CLL risk. 20553269 2010
dbSNP: rs11083846
rs11083846
Entrez Id: 25865
Gene Symbol: PRKD2
PRKD2
CUI: C0023434
Disease:
Chronic Lymphocytic Leukemia
A 0.830 GeneticVariation GWASCAT We identified six previously unreported CLL risk loci at 2q13 (rs17483466; P = 2.36 x 10(-10)), 2q37.1 (rs13397985, SP140; P = 5.40 x 10(-10)), 6p25.3 (rs872071, IRF4; P = 1.91 x 10(-20)), 11q24.1 (rs735665; P = 3.78 x 10(-12)), 15q23 (rs7176508; P = 4.54 x 10(-12)) and 19q13.32 (rs11083846, PRKD2; P = 3.96 x 10(-9)). 18758461 2008
dbSNP: rs11083846
rs11083846
Entrez Id: 25865
Gene Symbol: PRKD2
PRKD2
CUI: C0023434
Disease:
Chronic Lymphocytic Leukemia
A 0.830 GeneticVariation GWASDB We identified six previously unreported CLL risk loci at 2q13 (rs17483466; P = 2.36 x 10(-10)), 2q37.1 (rs13397985, SP140; P = 5.40 x 10(-10)), 6p25.3 (rs872071, IRF4; P = 1.91 x 10(-20)), 11q24.1 (rs735665; P = 3.78 x 10(-12)), 15q23 (rs7176508; P = 4.54 x 10(-12)) and 19q13.32 (rs11083846, PRKD2; P = 3.96 x 10(-9)). 18758461 2008
dbSNP: rs11083846
rs11083846
Entrez Id: 25865
Gene Symbol: PRKD2
PRKD2
CUI: C0023434
Disease:
Chronic Lymphocytic Leukemia
0.830 GeneticVariation BEFREE We identified six previously unreported CLL risk loci at 2q13 (rs17483466; P = 2.36 x 10(-10)), 2q37.1 (rs13397985, SP140; P = 5.40 x 10(-10)), 6p25.3 (rs872071, IRF4; P = 1.91 x 10(-20)), 11q24.1 (rs735665; P = 3.78 x 10(-12)), 15q23 (rs7176508; P = 4.54 x 10(-12)) and 19q13.32 (rs11083846, PRKD2; P = 3.96 x 10(-9)). 18758461 2008
dbSNP: rs425105
rs425105
Entrez Id: 25865
Gene Symbol: PRKD2
PRKD2
CUI: C0011854
Disease:
Diabetes Mellitus, Insulin-Dependent
0.800 GeneticVariation GWASCAT Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes. 19430480 2009
dbSNP: rs425105
rs425105
Entrez Id: 25865
Gene Symbol: PRKD2
PRKD2
CUI: C0011854
Disease:
Diabetes Mellitus, Insulin-Dependent
0.800 GeneticVariation GWASDB Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes. 19430480 2009
dbSNP: rs60652743
rs60652743
Entrez Id: 25865
Gene Symbol: PRKD2
PRKD2
CUI: C0008313
Disease:
Cholangitis, Sclerosing
A 0.700 GeneticVariation GWASCAT Genome-wide association study of primary sclerosing cholangitis identifies new risk loci and quantifies the genetic relationship with inflammatory bowel disease. 27992413 2017
dbSNP: rs114855972
rs114855972
Entrez Id: 25865
Gene Symbol: PRKD2
PRKD2
CUI: C0016529
Disease:
Forced expiratory volume function
A 0.700 GeneticVariation GWASCAT A genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry. 26634245 2015
dbSNP: rs115824942
rs115824942
Entrez Id: 25865
Gene Symbol: PRKD2
PRKD2
CUI: C0016529
Disease:
Forced expiratory volume function
T 0.700 GeneticVariation GWASCAT A genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry. 26634245 2015
dbSNP: rs138814219
rs138814219
Entrez Id: 25865
Gene Symbol: PRKD2
PRKD2
CUI: C0016529
Disease:
Forced expiratory volume function
T 0.700 GeneticVariation GWASCAT A genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry. 26634245 2015
dbSNP: rs139399000
rs139399000
Entrez Id: 25865
Gene Symbol: PRKD2
PRKD2
CUI: C0016529
Disease:
Forced expiratory volume function
G 0.700 GeneticVariation GWASCAT A genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry. 26634245 2015
dbSNP: rs147565295
rs147565295
Entrez Id: 25865
Gene Symbol: PRKD2
PRKD2
CUI: C0016529
Disease:
Forced expiratory volume function
A 0.700 GeneticVariation GWASCAT A genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry. 26634245 2015
dbSNP: rs151060619
rs151060619
Entrez Id: 25865;100422913
Gene Symbol: PRKD2;MIR320E
PRKD2;MIR320E
CUI: C0016529
Disease:
Forced expiratory volume function
A 0.700 GeneticVariation GWASCAT A genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry. 26634245 2015
dbSNP: rs402072
rs402072
Entrez Id: 25865
Gene Symbol: PRKD2
PRKD2
CUI: C0011854
Disease:
Diabetes Mellitus, Insulin-Dependent
T 0.700 GeneticVariation GWASCAT Fine mapping of type 1 diabetes susceptibility loci and evidence for colocalization of causal variants with lymphoid gene enhancers. 25751624 2015
dbSNP: rs75185364
rs75185364
Entrez Id: 25865
Gene Symbol: PRKD2
PRKD2
CUI: C0016529
Disease:
Forced expiratory volume function
C 0.700 GeneticVariation GWASCAT A genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry. 26634245 2015
dbSNP: rs60652743
rs60652743
Entrez Id: 25865
Gene Symbol: PRKD2
PRKD2
CUI: C0008313
Disease:
Cholangitis, Sclerosing
A 0.700 GeneticVariation GWASCAT Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis. 23603763 2013
dbSNP: rs60652743
rs60652743
Entrez Id: 25865
Gene Symbol: PRKD2
PRKD2
CUI: C0566602
Disease:
Primary sclerosing cholangitis
0.700 GeneticVariation GWASDB Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis. 23603763 2013
dbSNP: rs425105
rs425105
Entrez Id: 25865
Gene Symbol: PRKD2
PRKD2
CUI: C0026769
Disease:
Multiple Sclerosis
0.700 GeneticVariation GWASDB Genome-wide meta-analysis identifies novel multiple sclerosis susceptibility loci. 22190364 2011
dbSNP: rs11083846
rs11083846
Entrez Id: 25865
Gene Symbol: PRKD2
PRKD2
CUI: C2931822
Disease:
Nasopharyngeal carcinoma
0.700 GeneticVariation GWASDB A genome-wide association study of nasopharyngeal carcinoma identifies three new susceptibility loci. 20512145 2010
dbSNP: rs11083846
rs11083846
Entrez Id: 25865
Gene Symbol: PRKD2
PRKD2
CUI: C0855095
Disease:
Small Lymphocytic Lymphoma
A 0.700 GeneticVariation GWASCAT A genome-wide association study identifies six susceptibility loci for chronic lymphocytic leukemia. 18758461 2008
dbSNP: rs772173802
rs772173802
Entrez Id: 25865;100506068
Gene Symbol: PRKD2;DACT3-AS1
PRKD2;DACT3-AS1
CUI: C1334768
Disease:
Minor Salivary Gland Adenocarcinoma
0.010 GeneticVariation BEFREE PACs harbor recurrent PRKD1 E710D hotspot mutations in >70% of cases, whereas 80% of CASGs display rearrangements involving PRKD1, PRKD2, or PRKD3 (PRKD1/2/3). 31492931 2020
dbSNP: rs772173802
rs772173802
Entrez Id: 25865;100506068
Gene Symbol: PRKD2;DACT3-AS1
PRKD2;DACT3-AS1
CUI: C0027651
Disease:
Neoplasms
0.010 GeneticVariation BEFREE Our findings demonstrate that recurrent and high-grade PACs are underpinned by PRKD1 E710D hotspot mutations or PRKD2 rearrangements, and that recurrences of PACs may stem from the selection of pre-existing subclones in the primary tumour. 30843621 2019
dbSNP: rs772173802
rs772173802
Entrez Id: 25865;100506068
Gene Symbol: PRKD2;DACT3-AS1
PRKD2;DACT3-AS1
CUI: C1266086
Disease:
Polymorphous low grade adenocarcinoma
0.010 GeneticVariation BEFREE The vast majority of PLGAs harbour a PRKD1 E710D hot-spot somatic mutation or somatic rearrangements of PRKD1, PRKD2 or PRKD3. 26426580 2016