Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs9272346
rs9272346
Entrez Id: 3117
Gene Symbol: HLA-DQA1
HLA-DQA1
CUI: C0004096
Disease:
Asthma
A 0.810 GeneticVariation GWASCAT Shared and distinct genetic risk factors for childhood-onset and adult-onset asthma: genome-wide and transcriptome-wide studies. 31036433 2019
dbSNP: rs9272346
rs9272346
Entrez Id: 3117
Gene Symbol: HLA-DQA1
HLA-DQA1
CUI: C0004096
Disease:
Asthma
A 0.810 GeneticVariation GWASCAT Multiancestry association study identifies new asthma risk loci that colocalize with immune-cell enhancer marks. 29273806 2018
dbSNP: rs9272346
rs9272346
Entrez Id: 3117
Gene Symbol: HLA-DQA1
HLA-DQA1
CUI: C0004096
Disease:
Asthma
A 0.810 GeneticVariation GWASCAT Identification of a new locus at 16q12 associated with time to asthma onset. 27130862 2016
dbSNP: rs9272105
rs9272105
Entrez Id: 3117
Gene Symbol: HLA-DQA1
HLA-DQA1
CUI: C2239176
Disease:
Liver carcinoma
0.810 GeneticVariation BEFREE Through stepwise regression analysis, HBV genotype, the 11 mutations, HLA-DQ/DR SNPs, and the interaction of rs9272105 with mutation A1752G were all entered into the HCC prediction model, and the area under the curve for the panel including the HLA-DQ/DR SNPs, HBV genotype and mutations was 0.840. 26568165 2015
dbSNP: rs9272346
rs9272346
Entrez Id: 3117
Gene Symbol: HLA-DQA1
HLA-DQA1
CUI: C0011854
Disease:
Diabetes Mellitus, Insulin-Dependent
0.810 GeneticVariation BEFREE Our results showed significant association of 10 single nucleotide polymorphisms (SNPs) with T1D at p<0.01, including HLA-DQA1/rs9272346, ERBB3/rs2292239, SIRPG/rs2281808, IL2-KIAA1109/rs4505848, GLIS3/rs7020673, CD226/rs763361, PTPN2/rs478582, IKZF1/rs10272724, BACH2/rs11755527, C6orf173/rs9388489, whereas 5 more SNPs showed their association at 0.01<p<0.05 in Pakistani population. 25661663 2015
dbSNP: rs9272105
rs9272105
Entrez Id: 3117
Gene Symbol: HLA-DQA1
HLA-DQA1
CUI: C2239176
Disease:
Liver carcinoma
A 0.810 GeneticVariation GWASDB GWAS identifies novel susceptibility loci on 6p21.32 and 21q21.3 for hepatocellular carcinoma in chronic hepatitis B virus carriers. 22807686 2012
dbSNP: rs9272105
rs9272105
Entrez Id: 3117
Gene Symbol: HLA-DQA1
HLA-DQA1
CUI: C2239176
Disease:
Liver carcinoma
A 0.810 GeneticVariation GWASCAT GWAS identifies novel susceptibility loci on 6p21.32 and 21q21.3 for hepatocellular carcinoma in chronic hepatitis B virus carriers. 22807686 2012
dbSNP: rs9272346
rs9272346
Entrez Id: 3117
Gene Symbol: HLA-DQA1
HLA-DQA1
CUI: C0004096
Disease:
Asthma
0.810 GeneticVariation GWASCAT Of these, a common polymorphism (rs9272346) localizing to within 1 Kb of HLA-DQA1 (chromosome 6p21.3) was associated with asthma in adults (P-value = 2.2E-08) with consistent evidence in the more heterogeneous group of adults and children (P-value = 1.0E-04). 23181788 2012
dbSNP: rs9272346
rs9272346
Entrez Id: 3117
Gene Symbol: HLA-DQA1
HLA-DQA1
CUI: C0004096
Disease:
Asthma
0.810 GeneticVariation GWASDB Of these, a common polymorphism (rs9272346) localizing to within 1 Kb of HLA-DQA1 (chromosome 6p21.3) was associated with asthma in adults (P-value = 2.2E-08) with consistent evidence in the more heterogeneous group of adults and children (P-value = 1.0E-04). 23181788 2012
dbSNP: rs9272346
rs9272346
Entrez Id: 3117
Gene Symbol: HLA-DQA1
HLA-DQA1
CUI: C0004096
Disease:
Asthma
0.810 GeneticVariation BEFREE Of these, a common polymorphism (rs9272346) localizing to within 1 Kb of HLA-DQA1 (chromosome 6p21.3) was associated with asthma in adults (P-value = 2.2E-08) with consistent evidence in the more heterogeneous group of adults and children (P-value = 1.0E-04). 23181788 2012
dbSNP: rs9272346
rs9272346
Entrez Id: 3117
Gene Symbol: HLA-DQA1
HLA-DQA1
CUI: C0011854
Disease:
Diabetes Mellitus, Insulin-Dependent
G 0.810 GeneticVariation GWASCAT Meta-analysis of genome-wide association study data identifies additional type 1 diabetes risk loci. 18978792 2008
dbSNP: rs9272346
rs9272346
Entrez Id: 3117
Gene Symbol: HLA-DQA1
HLA-DQA1
CUI: C0011854
Disease:
Diabetes Mellitus, Insulin-Dependent
G 0.810 GeneticVariation GWASDB Meta-analysis of genome-wide association study data identifies additional type 1 diabetes risk loci. 18978792 2008
dbSNP: rs9272346
rs9272346
Entrez Id: 3117
Gene Symbol: HLA-DQA1
HLA-DQA1
CUI: C0011854
Disease:
Diabetes Mellitus, Insulin-Dependent
G 0.810 GeneticVariation GWASCAT Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls. 17554300 2007
dbSNP: rs9272346
rs9272346
Entrez Id: 3117
Gene Symbol: HLA-DQA1
HLA-DQA1
CUI: C0011854
Disease:
Diabetes Mellitus, Insulin-Dependent
G 0.810 GeneticVariation GWASDB Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls. 17554300 2007
dbSNP: rs17843604
rs17843604
Entrez Id: 3117
Gene Symbol: HLA-DQA1
HLA-DQA1
CUI: C0004096
Disease:
Asthma
0.800 GeneticVariation GWASCAT Large-scale, multiethnic genome-wide association study identifies novel loci contributing to asthma susceptibility in adults. 30578877 2019
dbSNP: rs6927022
rs6927022
Entrez Id: 3117;107986589
Gene Symbol: HLA-DQA1;LOC107986589
HLA-DQA1;LOC107986589
CUI: C0009324
Disease:
Ulcerative Colitis
0.800 GeneticVariation GWASCAT Genome-wide association study implicates immune activation of multiple integrin genes in inflammatory bowel disease. 28067908 2017
dbSNP: rs2187668
rs2187668
Entrez Id: 3117;3118;107986589
Gene Symbol: HLA-DQA1;HLA-DQA2;LOC107986589
HLA-DQA1;HLA-DQA2;LOC107986589
CUI: C0024141
Disease:
Lupus Erythematosus, Systemic
0.800 GeneticVariation GWASCAT Identification of a New Susceptibility Locus for Systemic Lupus Erythematosus on Chromosome 12 in Individuals of European Ancestry. 26316170 2016
dbSNP: rs2187668
rs2187668
Entrez Id: 3117;3118;107986589
Gene Symbol: HLA-DQA1;HLA-DQA2;LOC107986589
HLA-DQA1;HLA-DQA2;LOC107986589
CUI: C0024141
Disease:
Lupus Erythematosus, Systemic
T 0.800 GeneticVariation GWASDB GWAS identifies novel SLE susceptibility genes and explains the association of the HLA region. 24871463 2014
dbSNP: rs6927022
rs6927022
Entrez Id: 3117;107986589
Gene Symbol: HLA-DQA1;LOC107986589
HLA-DQA1;LOC107986589
CUI: C0009324
Disease:
Ulcerative Colitis
A 0.800 GeneticVariation GWASDB Host-microbe interactions have shaped the genetic architecture of inflammatory bowel disease. 23128233 2012
dbSNP: rs6927022
rs6927022
Entrez Id: 3117;107986589
Gene Symbol: HLA-DQA1;LOC107986589
HLA-DQA1;LOC107986589
CUI: C0009324
Disease:
Ulcerative Colitis
A 0.800 GeneticVariation GWASCAT Host-microbe interactions have shaped the genetic architecture of inflammatory bowel disease. 23128233 2012
dbSNP: rs2187668
rs2187668
Entrez Id: 3117;3118;107986589
Gene Symbol: HLA-DQA1;HLA-DQA2;LOC107986589
HLA-DQA1;HLA-DQA2;LOC107986589
CUI: C0017665
Disease:
Membranous glomerulonephritis
0.800 GeneticVariation GWASDB Risk HLA-DQA1 and PLA(2)R1 alleles in idiopathic membranous nephropathy. 21323541 2011
dbSNP: rs2187668
rs2187668
Entrez Id: 3117;3118;107986589
Gene Symbol: HLA-DQA1;HLA-DQA2;LOC107986589
HLA-DQA1;HLA-DQA2;LOC107986589
CUI: C0017665
Disease:
Membranous glomerulonephritis
A 0.800 GeneticVariation GWASCAT Risk HLA-DQA1 and PLA(2)R1 alleles in idiopathic membranous nephropathy. 21323541 2011
dbSNP: rs2187668
rs2187668
Entrez Id: 3117;3118;107986589
Gene Symbol: HLA-DQA1;HLA-DQA2;LOC107986589
HLA-DQA1;HLA-DQA2;LOC107986589
CUI: C0024141
Disease:
Lupus Erythematosus, Systemic
A 0.800 GeneticVariation GWASCAT Differential genetic associations for systemic lupus erythematosus based on anti-dsDNA autoantibody production. 21408207 2011
dbSNP: rs2187668
rs2187668
Entrez Id: 3117;3118;107986589
Gene Symbol: HLA-DQA1;HLA-DQA2;LOC107986589
HLA-DQA1;HLA-DQA2;LOC107986589
CUI: C0024141
Disease:
Lupus Erythematosus, Systemic
A 0.800 GeneticVariation GWASDB Differential genetic associations for systemic lupus erythematosus based on anti-dsDNA autoantibody production. 21408207 2011
dbSNP: rs9272535
rs9272535
Entrez Id: 3117;3118;107986589
Gene Symbol: HLA-DQA1;HLA-DQA2;LOC107986589
HLA-DQA1;HLA-DQA2;LOC107986589
CUI: C0023434
Disease:
Chronic Lymphocytic Leukemia
A 0.800 GeneticVariation GWASCAT Genome-wide association study identifies a novel susceptibility locus at 6p21.3 among familial CLL. 21131588 2011