APP, amyloid beta precursor protein, 351

N. diseases: 485; N. variants: 114
Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs1038162399
rs1038162399
Entrez Id: 351
Gene Symbol: APP
APP
CUI: C0002395
Disease:
Alzheimer's Disease
0.010 GeneticVariation BEFREE Generation and deposition of Aβ43 by the virtually inactive presenilin-1 L435F mutant contradicts the presenilin loss-of-function hypothesis of Alzheimer's disease. 26988102 2016
dbSNP: rs1162419578
rs1162419578
Entrez Id: 351
Gene Symbol: APP
APP
CUI: C0028043
Disease:
Nicotine Dependence
0.010 GeneticVariation BEFREE We show that carriers of a rare missense variant (allele frequency=0.24%) within CHRNA4, encoding an R336C substitution, have greater risk of nicotine addiction than non-carriers as assessed by the Fagerstrom Test for Nicotine Dependence (P=1.2 × 10(-4)). 26952864 2016
dbSNP: rs1223904774
rs1223904774
Entrez Id: 351
Gene Symbol: APP
APP
CUI: C0750901
Disease:
Alzheimer Disease, Early Onset
0.010 GeneticVariation BEFREE Using this approach, we generated human induced pluripotent stem cells with heterozygous and homozygous dominant early onset Alzheimer's disease-causing mutations in amyloid precursor protein (APP(Swe)) and presenilin 1 (PSEN1(M146V)) and derived cortical neurons, which displayed genotype-dependent disease-associated phenotypes. 27120160 2016
dbSNP: rs1386984902
rs1386984902
Entrez Id: 351
Gene Symbol: APP
APP
CUI: C0009241
Disease:
Cognition Disorders
0.010 GeneticVariation BEFREE 3xTg mice, which express an APP/PS1 mutation combined with a tau (P301L) mutation and that develop cognitive deficits at 6 months of age, were subjected to ELF-MF (50Hz, 500μT) exposure or sham exposure daily for 3 months. 26945731 2016
dbSNP: rs1386984902
rs1386984902
Entrez Id: 351
Gene Symbol: APP
APP
CUI: C0338451
Disease:
Frontotemporal dementia
0.010 GeneticVariation BEFREE The soluble fractalkine overexpression with adenoviral vectors reduced tau pathology and prevented neurodegeneration in a Tg4510 model of taupathy Finally, animals with Aβ (1-42) infused by lentivirus (cortex) or mice with the P301L mutation (frontotemporal dementia) had caspase-3 activation (8-fold) and higher proinflammatory TNF alpha levels and p-Tau deposits at 4 weeks postinfusion. 26567742 2016
dbSNP: rs1386984902
rs1386984902
Entrez Id: 351
Gene Symbol: APP
APP
CUI: C0338656
Disease:
Impaired cognition
0.010 GeneticVariation BEFREE 3xTg mice, which express an APP/PS1 mutation combined with a tau (P301L) mutation and that develop cognitive deficits at 6 months of age, were subjected to ELF-MF (50Hz, 500μT) exposure or sham exposure daily for 3 months. 26945731 2016
dbSNP: rs1386984902
rs1386984902
Entrez Id: 351
Gene Symbol: APP
APP
CUI: C0236642
Disease:
Pick Disease of the Brain
0.010 GeneticVariation BEFREE The soluble fractalkine overexpression with adenoviral vectors reduced tau pathology and prevented neurodegeneration in a Tg4510 model of taupathy Finally, animals with Aβ (1-42) infused by lentivirus (cortex) or mice with the P301L mutation (frontotemporal dementia) had caspase-3 activation (8-fold) and higher proinflammatory TNF alpha levels and p-Tau deposits at 4 weeks postinfusion. 26567742 2016
dbSNP: rs367709245
rs367709245
Entrez Id: 351
Gene Symbol: APP
APP
CUI: C0750901
Disease:
Alzheimer Disease, Early Onset
0.010 GeneticVariation BEFREE Additionally, we document an intronic 6 base pair (bp) deletion located 83 bp downstream of exon 17 (rs367709245, IVS17 83-88delAAGTAT), which has a nonsignificantly increased minor allele frequency in our sEOAD cohort (0.006) compared to LOAD (0.002) and controls (0.002). 26803359 2016
dbSNP: rs777260127
rs777260127
Entrez Id: 351
Gene Symbol: APP
APP
CUI: C0002395
Disease:
Alzheimer's Disease
0.010 GeneticVariation BEFREE Two rare variants have been nominally associated with AD risk or protection (TREM2 p.R47H, MAF approximately 0.002, OR approximately 4 and APP p.A673T, MAF approximately 0.0005, OR approximately 0.2). 28002825 2016
dbSNP: rs778758780
rs778758780
Entrez Id: 351
Gene Symbol: APP
APP
CUI: C0002395
Disease:
Alzheimer's Disease
0.010 GeneticVariation BEFREE We report a new mutation (p.Ile408Thr, c. 1223T>C) in the PSEN1 gene in one autosomal dominant Late Onset AD patient. 26549787 2016
dbSNP: rs1341026713
rs1341026713
Entrez Id: 351
Gene Symbol: APP
APP
CUI: C0235031
Disease:
Neurologic Symptoms
0.010 GeneticVariation BEFREE Mutation p.M233L was associated with prominent very early onset, rapidly progressive dementia, and neurologic symptoms, whereas p.R352C was associated with a progressive dementia, psychiatric syndrome, and chronic disease course. 25595498 2015
dbSNP: rs1341026713
rs1341026713
Entrez Id: 351
Gene Symbol: APP
APP
CUI: C0497327
Disease:
Dementia
0.010 GeneticVariation BEFREE Mutation p.M233L was associated with prominent very early onset, rapidly progressive dementia, and neurologic symptoms, whereas p.R352C was associated with a progressive dementia, psychiatric syndrome, and chronic disease course. 25595498 2015
dbSNP: rs1341026713
rs1341026713
Entrez Id: 351
Gene Symbol: APP
APP
CUI: C0338445
Disease:
Familial Alzheimer's disease of early onset
0.010 GeneticVariation BEFREE Identification of PSEN1 mutations p.M233L and p.R352C in Han Chinese families with early-onset familial Alzheimer's disease. 25595498 2015
dbSNP: rs140304729
rs140304729
Entrez Id: 351
Gene Symbol: APP
APP
CUI: C0030567
Disease:
Parkinson Disease
0.010 GeneticVariation BEFREE When additional controls from publically available databases were added, one rare variant in APP (c.1795G>A(p.(E599K))) was significantly associated with the PD phenotype but was not found in either the PD cases or controls of an independent replication sample. 25604855 2015
dbSNP: rs201269325
rs201269325
Entrez Id: 351
Gene Symbol: APP
APP
CUI: C0030567
Disease:
Parkinson Disease
0.010 GeneticVariation BEFREE When additional controls from publically available databases were added, one rare variant in APP (c.1795G>A(p.(E599K))) was significantly associated with the PD phenotype but was not found in either the PD cases or controls of an independent replication sample. 25604855 2015
dbSNP: rs201817335
rs201817335
Entrez Id: 351
Gene Symbol: APP
APP
CUI: C0027066
Disease:
Myoclonus
0.010 GeneticVariation BEFREE Because the same genotype was described in six cases from a Tunisian family with a typical AOA2 without myoclonus, we speculate this latter feature is associated with a second mutated gene, namely AFG3L2 (p.Gly116Arg variant). 25927548 2015
dbSNP: rs364048
rs364048
Entrez Id: 351
Gene Symbol: APP
APP
CUI: C0002395
Disease:
Alzheimer's Disease
0.010 GeneticVariation BEFREE After adjustments for age, sex, and APOE ε4 status, only one target SNP, rs463946 was associated with the risk of sAD in the dominant (OR 1.52, 95 % CI 1.01-2.29, P = 0.045) and overdominant models (OR 1.59, 95 % CI 1.04-2.43, P = 0.031); the results also showed a borderline association of rs364048 (OR 1.53, 95 % CI 1.00-2.34, P = 0.048) and rs466433 (OR 1.53, 95 % CI 1.00-2.34, P = 0.048) with the risk of sAD in the overdominant model. 25631235 2015
dbSNP: rs371425292
rs371425292
Entrez Id: 351
Gene Symbol: APP
APP
CUI: C4086165
Disease:
Childhood Neuroblastoma
0.010 GeneticVariation BEFREE We investigated the effect of the familial AD APP (Amyloid precursor protein) K670N/M671L double mutation, APP Swedish mutation (APPswe), on the expression of 5-HT1B, SERT, MAOA, p11 and 5-HT and its metabolite 5-HIAA in SH-SY5Y human neuroblastoma cell line stably transfected with APPswe mutation. 25841787 2015
dbSNP: rs371425292
rs371425292
Entrez Id: 351
Gene Symbol: APP
APP
CUI: C0027819
Disease:
Neuroblastoma
0.010 GeneticVariation BEFREE We investigated the effect of the familial AD APP (Amyloid precursor protein) K670N/M671L double mutation, APP Swedish mutation (APPswe), on the expression of 5-HT1B, SERT, MAOA, p11 and 5-HT and its metabolite 5-HIAA in SH-SY5Y human neuroblastoma cell line stably transfected with APPswe mutation. 25841787 2015
dbSNP: rs371425292
rs371425292
Entrez Id: 351
Gene Symbol: APP
APP
CUI: C0700095
Disease:
Central neuroblastoma
0.010 GeneticVariation BEFREE We investigated the effect of the familial AD APP (Amyloid precursor protein) K670N/M671L double mutation, APP Swedish mutation (APPswe), on the expression of 5-HT1B, SERT, MAOA, p11 and 5-HT and its metabolite 5-HIAA in SH-SY5Y human neuroblastoma cell line stably transfected with APPswe mutation. 25841787 2015
dbSNP: rs466433
rs466433
Entrez Id: 351
Gene Symbol: APP
APP
CUI: C0002395
Disease:
Alzheimer's Disease
0.010 GeneticVariation BEFREE After adjustments for age, sex, and APOE ε4 status, only one target SNP, rs463946 was associated with the risk of sAD in the dominant (OR 1.52, 95 % CI 1.01-2.29, P = 0.045) and overdominant models (OR 1.59, 95 % CI 1.04-2.43, P = 0.031); the results also showed a borderline association of rs364048 (OR 1.53, 95 % CI 1.00-2.34, P = 0.048) and rs466433 (OR 1.53, 95 % CI 1.00-2.34, P = 0.048) with the risk of sAD in the overdominant model. 25631235 2015
dbSNP: rs466448
rs466448
Entrez Id: 351
Gene Symbol: APP
APP
CUI: C0030567
Disease:
Parkinson Disease
0.010 GeneticVariation BEFREE Significant correlation with CSF Aβ42 levels in PD was observed for two SNPs, (APP rs466448 and APH1B rs2068143). 25808939 2015
dbSNP: rs572842823
rs572842823
Entrez Id: 351
Gene Symbol: APP
APP
CUI: C0700095
Disease:
Central neuroblastoma
0.010 GeneticVariation BEFREE We investigated the effect of the familial AD APP (Amyloid precursor protein) K670N/M671L double mutation, APP Swedish mutation (APPswe), on the expression of 5-HT1B, SERT, MAOA, p11 and 5-HT and its metabolite 5-HIAA in SH-SY5Y human neuroblastoma cell line stably transfected with APPswe mutation. 25841787 2015
dbSNP: rs572842823
rs572842823
Entrez Id: 351
Gene Symbol: APP
APP
CUI: C4086165
Disease:
Childhood Neuroblastoma
0.010 GeneticVariation BEFREE We investigated the effect of the familial AD APP (Amyloid precursor protein) K670N/M671L double mutation, APP Swedish mutation (APPswe), on the expression of 5-HT1B, SERT, MAOA, p11 and 5-HT and its metabolite 5-HIAA in SH-SY5Y human neuroblastoma cell line stably transfected with APPswe mutation. 25841787 2015
dbSNP: rs572842823
rs572842823
Entrez Id: 351
Gene Symbol: APP
APP
CUI: C0027819
Disease:
Neuroblastoma
0.010 GeneticVariation BEFREE We investigated the effect of the familial AD APP (Amyloid precursor protein) K670N/M671L double mutation, APP Swedish mutation (APPswe), on the expression of 5-HT1B, SERT, MAOA, p11 and 5-HT and its metabolite 5-HIAA in SH-SY5Y human neuroblastoma cell line stably transfected with APPswe mutation. 25841787 2015