Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs201278558
rs201278558
Entrez Id: 6509;400958;107984063
Gene Symbol: SLC1A4;LINC02245;LOC107984063
SLC1A4;LINC02245;LOC107984063
CUI: C3887898
Disease:
Infantile Spasm
A 0.700 CausalMutation CLINVAR
dbSNP: rs6546118
rs6546118
Entrez Id: 400958;107984063
Gene Symbol: LINC02245;LOC107984063
LINC02245;LOC107984063
CUI: C0023467
Disease:
Leukemia, Myelocytic, Acute
A 0.700 GeneticVariation GWASCAT Genome-wide haplotype association study identify the FGFR2 gene as a risk gene for acute myeloid leukemia. 27903959 2017
dbSNP: rs1009358
rs1009358
Entrez Id: 400958;102724233;107984063
Gene Symbol: LINC02245;LINC02576;LOC107984063
LINC02245;LINC02576;LOC107984063
CUI: C0011860
Disease:
Diabetes Mellitus, Non-Insulin-Dependent
C 0.700 GeneticVariation GWASCAT Genome-wide association analyses identify 143 risk variants and putative regulatory mechanisms for type 2 diabetes. 30054458 2018
dbSNP: rs1057517664
rs1057517664
Entrez Id: 6509;400958;107984063
Gene Symbol: SLC1A4;LINC02245;LOC107984063
SLC1A4;LINC02245;LOC107984063
CUI: C4225254
Disease:
SPASTIC TETRAPLEGIA, THIN CORPUS CALLOSUM, AND PROGRESSIVE MICROCEPHALY
C 0.700 CausalMutation CLINVAR
dbSNP: rs2540950
rs2540950
Entrez Id: 400958;102724233;107984063
Gene Symbol: LINC02245;LINC02576;LOC107984063
LINC02245;LINC02576;LOC107984063
CUI: C0871470
Disease:
Systolic Pressure
C 0.700 GeneticVariation GWASCAT Genome-wide association analyses using electronic health records identify new loci influencing blood pressure variation. 27841878 2017
dbSNP: rs6712664
rs6712664
Entrez Id: 400958;107984063
Gene Symbol: LINC02245;LOC107984063
LINC02245;LOC107984063
CUI: C0023467
Disease:
Leukemia, Myelocytic, Acute
C 0.700 GeneticVariation GWASCAT Genome-wide haplotype association study identify the FGFR2 gene as a risk gene for acute myeloid leukemia. 27903959 2017
dbSNP: rs6728523
rs6728523
Entrez Id: 23177;400958;107984063
Gene Symbol: CEP68;LINC02245;LOC107984063
CEP68;LINC02245;LOC107984063
CUI: C0392885
Disease:
High density lipoprotein measurement
C 0.700 GeneticVariation GWASCAT Genetics of blood lipids among ~300,000 multi-ethnic participants of the Million Veteran Program. 30275531 2018
dbSNP: rs9677813
rs9677813
Entrez Id: 400958;107984063
Gene Symbol: LINC02245;LOC107984063
LINC02245;LOC107984063
CUI: C0023467
Disease:
Leukemia, Myelocytic, Acute
C 0.700 GeneticVariation GWASCAT Genome-wide haplotype association study identify the FGFR2 gene as a risk gene for acute myeloid leukemia. 27903959 2017
dbSNP: rs2540953
rs2540953
Entrez Id: 400958;102724233;107984063
Gene Symbol: LINC02245;LINC02576;LOC107984063
LINC02245;LINC02576;LOC107984063
CUI: C0004238
Disease:
Atrial Fibrillation
G 0.700 GeneticVariation GWASCAT Identification of six new genetic loci associated with atrial fibrillation in the Japanese population. 28416822 2017
dbSNP: rs761533681
rs761533681
Entrez Id: 6509;400958;107984063
Gene Symbol: SLC1A4;LINC02245;LOC107984063
SLC1A4;LINC02245;LOC107984063
CUI: C4225254
Disease:
SPASTIC TETRAPLEGIA, THIN CORPUS CALLOSUM, AND PROGRESSIVE MICROCEPHALY
T 0.800 CausalMutation CLINVAR
dbSNP: rs1009360
rs1009360
Entrez Id: 400958;102724233;107984063
Gene Symbol: LINC02245;LINC02576;LOC107984063
LINC02245;LINC02576;LOC107984063
CUI: C0392885
Disease:
High density lipoprotein measurement
T 0.700 GeneticVariation GWASCAT A large electronic-health-record-based genome-wide study of serum lipids. 29507422 2018
dbSNP: rs1009360
rs1009360
Entrez Id: 400958;102724233;107984063
Gene Symbol: LINC02245;LINC02576;LOC107984063
LINC02245;LINC02576;LOC107984063
CUI: C0202236
Disease:
Triglycerides measurement
T 0.700 GeneticVariation GWASCAT A large electronic-health-record-based genome-wide study of serum lipids. 29507422 2018
dbSNP: rs1541580
rs1541580
Entrez Id: 6509;400958;107984063
Gene Symbol: SLC1A4;LINC02245;LOC107984063
SLC1A4;LINC02245;LOC107984063
CUI: C0023467
Disease:
Leukemia, Myelocytic, Acute
T 0.700 GeneticVariation GWASCAT Genome-wide haplotype association study identify the FGFR2 gene as a risk gene for acute myeloid leukemia. 27903959 2017
dbSNP: rs2723064
rs2723064
Entrez Id: 400958;102724233;107984063
Gene Symbol: LINC02245;LINC02576;LOC107984063
LINC02245;LINC02576;LOC107984063
CUI: C0004238
Disease:
Atrial Fibrillation
T 0.700 GeneticVariation GWASCAT Large-scale analyses of common and rare variants identify 12 new loci associated with atrial fibrillation. 28416818 2017
dbSNP: rs2723064
rs2723064
Entrez Id: 400958;102724233;107984063
Gene Symbol: LINC02245;LINC02576;LOC107984063
LINC02245;LINC02576;LOC107984063
CUI: C0004238
Disease:
Atrial Fibrillation
T 0.700 GeneticVariation GWASCAT Multi-ethnic genome-wide association study for atrial fibrillation. 29892015 2018
dbSNP: rs3732062
rs3732062
Entrez Id: 6509;400958;107984063
Gene Symbol: SLC1A4;LINC02245;LOC107984063
SLC1A4;LINC02245;LOC107984063
CUI: C0023467
Disease:
Leukemia, Myelocytic, Acute
T 0.700 GeneticVariation GWASCAT Genome-wide haplotype association study identify the FGFR2 gene as a risk gene for acute myeloid leukemia. 27903959 2017
dbSNP: rs3770705
rs3770705
Entrez Id: 6509;400958;107984063
Gene Symbol: SLC1A4;LINC02245;LOC107984063
SLC1A4;LINC02245;LOC107984063
CUI: C0023467
Disease:
Leukemia, Myelocytic, Acute
T 0.700 GeneticVariation GWASCAT Genome-wide haplotype association study identify the FGFR2 gene as a risk gene for acute myeloid leukemia. 27903959 2017
dbSNP: rs761533681
rs761533681
Entrez Id: 6509;400958;107984063
Gene Symbol: SLC1A4;LINC02245;LOC107984063
SLC1A4;LINC02245;LOC107984063
CUI: C0432072
Disease:
Dysmorphic features
T 0.700 CausalMutation CLINVAR L-serine synthesis in the central nervous system: a review on serine deficiency disorders. 19963421 2010
dbSNP: rs761533681
rs761533681
Entrez Id: 6509;400958;107984063
Gene Symbol: SLC1A4;LINC02245;LOC107984063
SLC1A4;LINC02245;LOC107984063
CUI: C0432072
Disease:
Dysmorphic features
T 0.700 CausalMutation CLINVAR Novel European SLC1A4 variant: infantile spasms and population ancestry analysis. 27193218 2016
dbSNP: rs761533681
rs761533681
Entrez Id: 6509;400958;107984063
Gene Symbol: SLC1A4;LINC02245;LOC107984063
SLC1A4;LINC02245;LOC107984063
CUI: C0432072
Disease:
Dysmorphic features
T 0.700 CausalMutation CLINVAR A homozygous mutation in SLC1A4 in siblings with severe intellectual disability and microcephaly. 25930971 2015
dbSNP: rs761533681
rs761533681
Entrez Id: 6509;400958;107984063
Gene Symbol: SLC1A4;LINC02245;LOC107984063
SLC1A4;LINC02245;LOC107984063
CUI: C0432072
Disease:
Dysmorphic features
T 0.700 CausalMutation CLINVAR Mutations in SLC1A4, encoding the brain serine transporter, are associated with developmental delay, microcephaly and hypomyelination. 26041762 2015
dbSNP: rs761533681
rs761533681
Entrez Id: 6509;400958;107984063
Gene Symbol: SLC1A4;LINC02245;LOC107984063
SLC1A4;LINC02245;LOC107984063
CUI: C0432072
Disease:
Dysmorphic features
T 0.700 CausalMutation CLINVAR SLC1A4 mutations cause a novel disorder of intellectual disability, progressive microcephaly, spasticity and thin corpus callosum. 26138499 2015
dbSNP: rs761533681
rs761533681
Entrez Id: 6509;400958;107984063
Gene Symbol: SLC1A4;LINC02245;LOC107984063
SLC1A4;LINC02245;LOC107984063
CUI: C0432072
Disease:
Dysmorphic features
T 0.700 CausalMutation CLINVAR Calmodulin and protein kinase C cross-talk: the MARCKS protein is an actin filament and plasma membrane cross-linking protein regulated by protein kinase C phosphorylation and by calmodulin. 1395931 1992