MSH2, mutS homolog 2, 4436

N. diseases: 490; N. variants: 777
Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs55778204
rs55778204
Entrez Id: 4436
Gene Symbol: MSH2
MSH2
CUI: C0032580
Disease:
Adenomatous Polyposis Coli
0.010 GeneticVariation BEFREE In them, 2 rare variants (c.694C>T in APC and c.1690A>G in MSH2) might be the putative causal mutations for familial adenomatous polyposis (FAP) since the rarity of the mutated allele in normal controls. c.694C>T was detected in only affected members and generated a premature stop codon in APC. 24735542 2014
dbSNP: rs63750934
rs63750934
Entrez Id: 4436
Gene Symbol: MSH2
MSH2
CUI: C0032580
Disease:
Adenomatous Polyposis Coli
0.010 GeneticVariation BEFREE In them, 2 rare variants (c.694C>T in APC and c.1690A>G in MSH2) might be the putative causal mutations for familial adenomatous polyposis (FAP) since the rarity of the mutated allele in normal controls. c.694C>T was detected in only affected members and generated a premature stop codon in APC. 24735542 2014
dbSNP: rs63749993
rs63749993
Entrez Id: 4436
Gene Symbol: MSH2
MSH2
CUI: C0206686
Disease:
Adrenocortical carcinoma
0.010 GeneticVariation BEFREE Here we describe a patient from a Lynch syndrome family with a germline mutation c.2063T>G (p.M688R) in the MSH2 gene, who developed an adrenal cortical carcinoma, a tumor not usually associated with LS. 21225464 2011
dbSNP: rs186552003
rs186552003
Entrez Id: 4436
Gene Symbol: MSH2
MSH2
CUI: C0002395
Disease:
Alzheimer's Disease
A 0.700 GeneticVariation GWASCAT Family-based association analyses of imputed genotypes reveal genome-wide significant association of Alzheimer's disease with OSBPL6, PTPRG, and PDCL3. 26830138 2016
dbSNP: rs1114167806
rs1114167806
Entrez Id: 4436
Gene Symbol: MSH2
MSH2
CUI: C0678222
Disease:
Breast Carcinoma
T 0.700 CausalMutation CLINVAR
dbSNP: rs4987188
rs4987188
Entrez Id: 4436
Gene Symbol: MSH2
MSH2
CUI: C0678222
Disease:
Breast Carcinoma
0.030 GeneticVariation BEFREE Statistically significant correlations were identified between 4 single nucleotide polymorphisms and the breast cancer risk: rs25487 rs4987188 rs13181 and rs799917. 29209986 2019
dbSNP: rs4987188
rs4987188
Entrez Id: 4436
Gene Symbol: MSH2
MSH2
CUI: C0678222
Disease:
Breast Carcinoma
0.030 GeneticVariation BEFREE Therefore, MMR may play a role in the breast carcinogenesis and the Gly322Asp polymorphism of the hMSH2 gene may be considered as a potential marker in breast cancer. 16252083 2005
dbSNP: rs4987188
rs4987188
Entrez Id: 4436
Gene Symbol: MSH2
MSH2
CUI: C0678222
Disease:
Breast Carcinoma
0.030 GeneticVariation BEFREE MSH2-G322D likely does not cause a MMR defect, although this variant has also been associated with breast cancer as indeed seen in our patient. 19728162 2009
dbSNP: rs17217772
rs17217772
Entrez Id: 4436
Gene Symbol: MSH2
MSH2
CUI: C0678222
Disease:
Breast Carcinoma
0.010 GeneticVariation BEFREE We performed a case-control study to test the association between two polymorphisms in the hMSH2 gene: an A --> G transition at 127 position producing an Asn --> Ser substitution at codon 127 (the Asn127Ser polymorphism) and a G --> A transition at 1032 position resulting in a Gly --> Asp change at codon 322 (the Gly322Asp polymorphism) and breast cancer risk and cancer progression. 16252083 2005
dbSNP: rs2303425
rs2303425
Entrez Id: 4436
Gene Symbol: MSH2
MSH2
CUI: C0678222
Disease:
Breast Carcinoma
0.010 GeneticVariation BEFREE Logistic regression analysis showed that individuals with the MSH2 rs2303425 C/C genotype had a significantly increased risk of breast cancer compared to those with the T/T genotype (adjusted odds ratio 2.0; 95 % confidence interval 1.1-3.8), particularly in early-onset breast cancer patients with the luminal A subtype. 26975740 2017
dbSNP: rs2303428
rs2303428
Entrez Id: 4436
Gene Symbol: MSH2
MSH2
CUI: C0678222
Disease:
Breast Carcinoma
0.010 GeneticVariation BEFREE An increase in breast cancer risk was observed for women with the MUTYH_rs3219489 variant allele (odds ratio (OR)=2.23, 95% confidence interval (CI)=1.10-4.52) and for women with the MSH2_rs2303428 variant allele (OR=1.73, 95% CI=1.00-2.99). 27630279 2016
dbSNP: rs2303426
rs2303426
Entrez Id: 4436
Gene Symbol: MSH2
MSH2
CUI: C0596263
Disease:
Carcinogenesis
0.010 GeneticVariation BEFREE A case-control study (230 GB carcinogenesis patients and 230 controls) was undertaken to evaluate whether genetic variations in 3 DNA repair genes ERCC2 (Asp312Asn [rs1799793] and Lys751Gln [rs13181]), MSH2 (-118T > C [rs2303425] and IVS1 + 9G>C [rs2303426]), and OGG1 (Ser326Cys [rs1052133] and 748-15C > G [rs2072668]) are associated with GB carcinogenesis risk in a North Indian population. 20564624 2010
dbSNP: rs4987188
rs4987188
Entrez Id: 4436
Gene Symbol: MSH2
MSH2
CUI: C0596263
Disease:
Carcinogenesis
0.010 GeneticVariation BEFREE Therefore, MMR may play a role in the breast carcinogenesis and the Gly322Asp polymorphism of the hMSH2 gene may be considered as a potential marker in breast cancer. 16252083 2005
dbSNP: rs267607911
rs267607911
Entrez Id: 4436
Gene Symbol: MSH2
MSH2
CUI: C0007097
Disease:
Carcinoma
0.010 GeneticVariation BEFREE The carcinomas showed microsatellite instability in the presence of MLH1, PMS2, MSH2 and MSH6 proteins, indicating that the variant c.1A>G leads to an alternative protein with reduced activity that is retained in the tumours.Our data suggest that the MSH2 variant c.1A>G (p.Met1?) should not be considered as a regular pathogenic mutation that leads to a strongly increased cancer risk, though it possibly contributes to a more severe phenotype when combined with a truncating mutation on the other allele. 18781192 2009
dbSNP: rs768824654
rs768824654
Entrez Id: 4436
Gene Symbol: MSH2
MSH2
CUI: C0007097
Disease:
Carcinoma
0.010 GeneticVariation BEFREE The carcinomas showed microsatellite instability in the presence of MLH1, PMS2, MSH2 and MSH6 proteins, indicating that the variant c.1A>G leads to an alternative protein with reduced activity that is retained in the tumours.Our data suggest that the MSH2 variant c.1A>G (p.Met1?) should not be considered as a regular pathogenic mutation that leads to a strongly increased cancer risk, though it possibly contributes to a more severe phenotype when combined with a truncating mutation on the other allele. 18781192 2009
dbSNP: rs2303425
rs2303425
Entrez Id: 4436
Gene Symbol: MSH2
MSH2
CUI: C0684249
Disease:
Carcinoma of lung
0.010 GeneticVariation BEFREE The results for rs2303425 polymorphism revealed an increased risk of lung cancer for variant genotype CC (OR=2.28; 95% CI=1.12-4.63; p=0.024) in the recessive model. 25252909 2015
dbSNP: rs551060742
rs551060742
Entrez Id: 4436
Gene Symbol: MSH2
MSH2
CUI: C0684249
Disease:
Carcinoma of lung
0.010 GeneticVariation BEFREE We detected the epidermal growth factor receptor L858R, MSH2 R929* and telomerase reverse transcriptase amplification in the lung cancer specimen; CDH1 c.1320+1G>T mutation in the gastric cancer (GC) specimen; and MLH1 c.1896+5G>A germline mutation in the lung and GC specimens by 450 cancer-related gene mutations detection using next-generation sequencing technology. 31207149 2019
dbSNP: rs2303425
rs2303425
Entrez Id: 4436
Gene Symbol: MSH2
MSH2
CUI: C4721806
Disease:
Carcinoma, Basal Cell
0.010 GeneticVariation BEFREE The SNPs rs2303425 were not associated with Basal Cell Carcinoma. 28667494 2018
dbSNP: rs2303428
rs2303428
Entrez Id: 4436
Gene Symbol: MSH2
MSH2
CUI: C4721610
Disease:
Carcinoma, Ovarian Epithelial
0.010 GeneticVariation BEFREE However, survival analysis showed that the rs2303428 polymorphism was related to the prognosis of epithelial ovarian cancer patients. 31273068 2019
dbSNP: rs267607911
rs267607911
Entrez Id: 4436
Gene Symbol: MSH2
MSH2
CUI: C4721610
Disease:
Carcinoma, Ovarian Epithelial
0.010 GeneticVariation BEFREE We report on an ovarian cancer patient who carries a germline MSH2 c.1A>C variant which alters the translation initiation codon. 21837758 2012
dbSNP: rs63749993
rs63749993
Entrez Id: 4436
Gene Symbol: MSH2
MSH2
CUI: C0085136
Disease:
Central Nervous System Neoplasms
0.010 GeneticVariation BEFREE The functional analysis along with variability in tumor expression and the high incidence of CNS tumors suggests that hMSH2(M688R) may act as a dominant negative in some tissues, while the hMSH2(M688I) is most likely a benign polymorphism. 22739024 2012
dbSNP: rs63750790
rs63750790
Entrez Id: 4436
Gene Symbol: MSH2
MSH2
CUI: C0085136
Disease:
Central Nervous System Neoplasms
0.010 GeneticVariation BEFREE The functional analysis along with variability in tumor expression and the high incidence of CNS tumors suggests that hMSH2(M688R) may act as a dominant negative in some tissues, while the hMSH2(M688I) is most likely a benign polymorphism. 22739024 2012
dbSNP: rs4987188
rs4987188
Entrez Id: 4436
Gene Symbol: MSH2
MSH2
CUI: C0699790
Disease:
Colon Carcinoma
0.010 GeneticVariation BEFREE Our aim was to determine the effect of the single nucleotide polymorphisms (SNP) -93G>A of the MLH1 gene (rs1800734) and Gly322Asp of the MSH2 gene (rs4987188) on the risk of colon cancer (CC) and identify any relationship with clinical factors. 29181059 2017
dbSNP: rs63750875
rs63750875
Entrez Id: 4436
Gene Symbol: MSH2
MSH2
CUI: C0699790
Disease:
Colon Carcinoma
0.010 GeneticVariation BEFREE A636P is associated with early-onset colon cancer in Ashkenazi Jews. 12595050 2003
dbSNP: rs730881756
rs730881756
Entrez Id: 4436
Gene Symbol: MSH2
MSH2
CUI: C0699790
Disease:
Colon Carcinoma
0.010 GeneticVariation BEFREE From the Colon Cancer Family Registry, we identified 10 carriers who had both a MUTYH mutation (6 with c.1187G>A p.(Gly396Asp), 3 with c.821G>A p.(Arg274Gln), and 1 with c.536A>G p.(Tyr179Cys)) and a MMR gene mutation (3 in MLH1, 6 in MSH2, and 1 in PMS2), 375 carriers of a single (monoallelic) MUTYH mutation alone, and 469 carriers of a MMR gene mutation alone. 26202870 2015