Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs10764338
rs10764338
Entrez Id: 5305
Gene Symbol: PIP4K2A
PIP4K2A
CUI: C2697636
Disease:
Hyperdiploid B Acute Lymphoblastic Leukemia
0.010 GeneticVariation BEFREE These SNPs are located at CDKN2A (rs3731217) and IKZF1 (rs4132601), genes frequently lost in ALL, and at CEBPE (rs2239633), ARID5B (rs7089424), PIP4K2A (rs10764338), and GATA3 (rs3824662), genes located on chromosomes gained in high-hyperdiploid ALL. 26575185 2015
dbSNP: rs10828317
rs10828317
Entrez Id: 5305
Gene Symbol: PIP4K2A
PIP4K2A
CUI: C0023485
Disease:
Precursor B-Cell Lymphoblastic Leukemia-Lymphoma
0.700 GeneticVariation GWASCAT Genome-wide association study identifies susceptibility loci for B-cell childhood acute lymphoblastic leukemia. 29632299 2018
dbSNP: rs10828317
rs10828317
Entrez Id: 5305
Gene Symbol: PIP4K2A
PIP4K2A
CUI: C0023485
Disease:
Precursor B-Cell Lymphoblastic Leukemia-Lymphoma
T 0.700 GeneticVariation GWASCAT Variation at 10p12.2 and 10p14 influences risk of childhood B-cell acute lymphoblastic leukemia and phenotype. 23996088 2013
dbSNP: rs10828317
rs10828317
Entrez Id: 5305
Gene Symbol: PIP4K2A
PIP4K2A
CUI: C0751606
Disease:
Adult Acute Lymphocytic Leukemia
0.010 GeneticVariation BEFREE The rs10828317 association was shown to be specifically associated with hyperdiploid ALL, whereas the rs3824662-associated risk was confined to nonhyperdiploid non-TEL-AML1 + ALL. 23996088 2013
dbSNP: rs10828317
rs10828317
Entrez Id: 5305
Gene Symbol: PIP4K2A
PIP4K2A
CUI: C3714760
Disease:
Drug-induced tardive dyskinesia
0.010 GeneticVariation BEFREE A significant association was established between the functional mutation N251S-polymorphism of the PIP5K2A gene (rs10828317) and tardive dyskinesia, while the other 2 examined nonfunctional single nucleotide polymorphisms were not related. 25548108 2014
dbSNP: rs10828317
rs10828317
Entrez Id: 5305
Gene Symbol: PIP4K2A
PIP4K2A
CUI: C0036341
Disease:
Schizophrenia
0.010 GeneticVariation BEFREE A recent family-based transmission disequilibrium test in the German and Israeli populations found that four single nucleotide polymorphisms, rs1417374, rs10828317, rs746203 and rs8341 in this gene or nearby intergenic regions are significantly associated with schizophrenia. 17555944 2007
dbSNP: rs10828317
rs10828317
Entrez Id: 5305
Gene Symbol: PIP4K2A
PIP4K2A
CUI: C0023449
Disease:
Acute lymphocytic leukemia
0.010 GeneticVariation BEFREE The rs10828317 association was shown to be specifically associated with hyperdiploid ALL, whereas the rs3824662-associated risk was confined to nonhyperdiploid non-TEL-AML1 + ALL. 23996088 2013
dbSNP: rs10828317
rs10828317
Entrez Id: 5305
Gene Symbol: PIP4K2A
PIP4K2A
CUI: C0023452
Disease:
Childhood Acute Lymphoblastic Leukemia
0.010 GeneticVariation BEFREE The rs10828317 association was shown to be specifically associated with hyperdiploid ALL, whereas the rs3824662-associated risk was confined to nonhyperdiploid non-TEL-AML1 + ALL. 23996088 2013
dbSNP: rs10828317
rs10828317
Entrez Id: 5305
Gene Symbol: PIP4K2A
PIP4K2A
CUI: C0027651
Disease:
Neoplasms
0.010 GeneticVariation BEFREE The single nucleotide polymorphism rs10828317 is responsible for the N215S polymorphism in exon 7 of PIP4K2A, and rs3824662 localizes to intron 3 of the transcription factor and putative tumor suppressor gene GATA3. 23996088 2013
dbSNP: rs10828317
rs10828317
Entrez Id: 5305
Gene Symbol: PIP4K2A
PIP4K2A
CUI: C2697636
Disease:
Hyperdiploid B Acute Lymphoblastic Leukemia
0.010 GeneticVariation BEFREE The rs10828317 association was shown to be specifically associated with hyperdiploid ALL, whereas the rs3824662-associated risk was confined to nonhyperdiploid non-TEL-AML1 + ALL. 23996088 2013
dbSNP: rs10828317
rs10828317
Entrez Id: 5305
Gene Symbol: PIP4K2A
PIP4K2A
CUI: C0686347
Disease:
Tardive Dyskinesia
0.010 GeneticVariation BEFREE A significant association was established between the functional mutation N251S-polymorphism of the PIP5K2A gene (rs10828317) and tardive dyskinesia, while the other 2 examined nonfunctional single nucleotide polymorphisms were not related. 25548108 2014
dbSNP: rs11013046
rs11013046
Entrez Id: 5305
Gene Symbol: PIP4K2A
PIP4K2A
CUI: C1961102
Disease:
Precursor Cell Lymphoblastic Leukemia Lymphoma
A 0.700 GeneticVariation GWASDB Novel susceptibility variants at 10p12.31-12.2 for childhood acute lymphoblastic leukemia in ethnically diverse populations. 23512250 2013
dbSNP: rs11013052
rs11013052
Entrez Id: 5305
Gene Symbol: PIP4K2A
PIP4K2A
CUI: C0036341
Disease:
Schizophrenia
0.010 GeneticVariation BEFREE An explorative study combining the results of this study with those of our previous study indicated that rs11013052 was significantly associated with schizophrenia in the combined sample (P = 0.002). 18314871 2008
dbSNP: rs1409395
rs1409395
Entrez Id: 5305
Gene Symbol: PIP4K2A
PIP4K2A
CUI: C0036341
Disease:
Schizophrenia
0.010 GeneticVariation BEFREE Association analysis of the stratified sample showed a trend toward association of PIP4K2A SNPs rs1417374 and rs1409395 with schizophrenia in the DTNBP1 HRH positive families. 19475563 2010
dbSNP: rs1778335
rs1778335
Entrez Id: 5305
Gene Symbol: PIP4K2A
PIP4K2A
CUI: C0149925
Disease:
Small cell carcinoma of lung
0.010 GeneticVariation BEFREE Knockdown of PIP4K2A, CCT5, CMBL, EXO1, KMO and OPN3, genes within 200 kb up-/downstream of the 3 SNPs that were associated with SCLC overall survival (rs1778335, rs2662411 and rs7519667), significantly desensitized H196 to paclitaxel. 23006423 2012
dbSNP: rs2230469
rs2230469
Entrez Id: 5305
Gene Symbol: PIP4K2A
PIP4K2A
CUI: C0036341
Disease:
Schizophrenia
0.020 GeneticVariation BEFREE At least, the insufficiency of (N251S)-PIP5K2A to stimulate neuronal M channels may contribute to the clinical phenotype of schizophrenia. 18545987 2008
dbSNP: rs2230469
rs2230469
Entrez Id: 5305
Gene Symbol: PIP4K2A
PIP4K2A
CUI: C0036341
Disease:
Schizophrenia
0.020 GeneticVariation BEFREE Coexpression of the schizophrenia-associated mutant (N251S)PIP5K2A significantly decreased I(glu) in oocytes expressing EAAT3 with or without additional expression of wild type PIP5K2A. 19644675 2009
dbSNP: rs2230469
rs2230469
Entrez Id: 5305
Gene Symbol: PIP4K2A
PIP4K2A
CUI: C0686347
Disease:
Tardive Dyskinesia
0.010 GeneticVariation BEFREE A significant association was established between the functional mutation N251S-polymorphism of the PIP5K2A gene (rs10828317) and tardive dyskinesia, while the other 2 examined nonfunctional single nucleotide polymorphisms were not related. 25548108 2014
dbSNP: rs2230469
rs2230469
Entrez Id: 5305
Gene Symbol: PIP4K2A
PIP4K2A
CUI: C3714760
Disease:
Drug-induced tardive dyskinesia
0.010 GeneticVariation BEFREE A significant association was established between the functional mutation N251S-polymorphism of the PIP5K2A gene (rs10828317) and tardive dyskinesia, while the other 2 examined nonfunctional single nucleotide polymorphisms were not related. 25548108 2014
dbSNP: rs370356098
rs370356098
Entrez Id: 5305
Gene Symbol: PIP4K2A
PIP4K2A
CUI: C0678222
Disease:
Breast Carcinoma
C 0.700 GeneticVariation GWASCAT Association analysis identifies 65 new breast cancer risk loci. 29059683 2017
dbSNP: rs4748813
rs4748813
Entrez Id: 5305
Gene Symbol: PIP4K2A
PIP4K2A
CUI: C1961102
Disease:
Precursor Cell Lymphoblastic Leukemia Lymphoma
T 0.700 GeneticVariation GWASCAT GWAS in childhood acute lymphoblastic leukemia reveals novel genetic associations at chromosomes 17q12 and 8q24.21. 29348612 2018
dbSNP: rs56333866
rs56333866
Entrez Id: 5305
Gene Symbol: PIP4K2A
PIP4K2A
CUI: C0678222
Disease:
Breast Carcinoma
T 0.700 GeneticVariation GWASCAT Association analysis identifies 65 new breast cancer risk loci. 29059683 2017
dbSNP: rs7075634
rs7075634
Entrez Id: 5305
Gene Symbol: PIP4K2A
PIP4K2A
CUI: C1961102
Disease:
Precursor Cell Lymphoblastic Leukemia Lymphoma
C 0.700 GeneticVariation GWASDB Novel susceptibility variants at 10p12.31-12.2 for childhood acute lymphoblastic leukemia in ethnically diverse populations. 23512250 2013
dbSNP: rs7081744
rs7081744
Entrez Id: 5305
Gene Symbol: PIP4K2A
PIP4K2A
CUI: C0005890
Disease:
Body Height
0.700 GeneticVariation GWASCAT Characterizing rare and low-frequency height-associated variants in the Japanese population. 31562340 2019
dbSNP: rs7088318
rs7088318
Entrez Id: 5305
Gene Symbol: PIP4K2A
PIP4K2A
CUI: C1961102
Disease:
Precursor Cell Lymphoblastic Leukemia Lymphoma
A 0.700 GeneticVariation GWASDB Novel susceptibility variants at 10p12.31-12.2 for childhood acute lymphoblastic leukemia in ethnically diverse populations. 23512250 2013