PTX3, pentraxin 3, 5806

N. diseases: 296; N. variants: 5
Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs3816527
rs3816527
Entrez Id: 5806;79674
Gene Symbol: PTX3;VEPH1
PTX3;VEPH1
CUI: C0006826
Disease:
Malignant Neoplasms
0.010 GeneticVariation BEFREE We found that rs3816527 in smokers was correlated with the development of late-stage cancer (odds ratio [OR], 2.328; 95% confidence interval [CI], 1.078-5.027) and increased lymph node metastasis (OR, 2.152; 95% CI, 1.047-4.422). 31334115 2019
dbSNP: rs3816527
rs3816527
Entrez Id: 5806;79674
Gene Symbol: PTX3;VEPH1
PTX3;VEPH1
CUI: C0153381
Disease:
Malignant neoplasm of mouth
0.010 GeneticVariation BEFREE In conclusion, our results suggested that <i>PTX3</i> rs3816527 plays a role in oral cancer development. 31334115 2019
dbSNP: rs3816527
rs3816527
Entrez Id: 5806;79674
Gene Symbol: PTX3;VEPH1
PTX3;VEPH1
CUI: C0220641
Disease:
Lip and Oral Cavity Carcinoma
0.010 GeneticVariation BEFREE In conclusion, our results suggested that <i>PTX3</i> rs3816527 plays a role in oral cancer development. 31334115 2019
dbSNP: rs3816527
rs3816527
Entrez Id: 5806;79674
Gene Symbol: PTX3;VEPH1
PTX3;VEPH1
CUI: C1306459
Disease:
Primary malignant neoplasm
0.010 GeneticVariation BEFREE We found that rs3816527 in smokers was correlated with the development of late-stage cancer (odds ratio [OR], 2.328; 95% confidence interval [CI], 1.078-5.027) and increased lymph node metastasis (OR, 2.152; 95% CI, 1.047-4.422). 31334115 2019
dbSNP: rs3816527
rs3816527
Entrez Id: 5806;79674
Gene Symbol: PTX3;VEPH1
PTX3;VEPH1
CUI: C0686619
Disease:
Secondary malignant neoplasm of lymph node
0.010 GeneticVariation BEFREE We found that rs3816527 in smokers was correlated with the development of late-stage cancer (odds ratio [OR], 2.328; 95% confidence interval [CI], 1.078-5.027) and increased lymph node metastasis (OR, 2.152; 95% CI, 1.047-4.422). 31334115 2019
dbSNP: rs1840680
rs1840680
Entrez Id: 5806;79674
Gene Symbol: PTX3;VEPH1
PTX3;VEPH1
CUI: C2350530
Disease:
Bronchopulmonary Aspergillosis
0.010 GeneticVariation BEFREE This study showed a significant association between PTX3 rs1840680 polymorphisms and the susceptibility of pulmonary aspergillosis in patients with COPD. 29020397 2018
dbSNP: rs1840680
rs1840680
Entrez Id: 5806;79674
Gene Symbol: PTX3;VEPH1
PTX3;VEPH1
CUI: C2350529
Disease:
Pulmonary Aspergillosis
0.010 GeneticVariation BEFREE This study showed a significant association between PTX3 rs1840680 polymorphisms and the susceptibility of pulmonary aspergillosis in patients with COPD. 29020397 2018
dbSNP: rs1840680
rs1840680
Entrez Id: 5806;79674
Gene Symbol: PTX3;VEPH1
PTX3;VEPH1
CUI: C1853230
Disease:
Aphakia, congenital primary
0.010 GeneticVariation BEFREE The recessive model for SNP rs1840680 suggests that the AA homozygote is associated with a higher risk for pulmonary aspergillosis (both IPA and CPA) in COPD patients. 29020397 2018
dbSNP: rs1840680
rs1840680
Entrez Id: 5806;79674
Gene Symbol: PTX3;VEPH1
PTX3;VEPH1
CUI: C0022283
Disease:
Incontinentia Pigmenti Achromians
0.010 GeneticVariation BEFREE The recessive model for SNP rs1840680 suggests that the AA homozygote is associated with a higher risk for pulmonary aspergillosis (both IPA and CPA) in COPD patients. 29020397 2018
dbSNP: rs1840680
rs1840680
Entrez Id: 5806;79674
Gene Symbol: PTX3;VEPH1
PTX3;VEPH1
CUI: C0004030
Disease:
Aspergillosis
0.010 GeneticVariation BEFREE Three single nucleotide polymorphisms (SNPs; rs2305619, rs3816527, and rs1840680) in the PTX3 gene were detected by polymerase chain reaction direct sequencing, and their associations with aspergillosis were evaluated. 29020397 2018
dbSNP: rs1840680
rs1840680
Entrez Id: 5806;79674
Gene Symbol: PTX3;VEPH1
PTX3;VEPH1
CUI: C0024117
Disease:
Chronic Obstructive Airway Disease
0.010 GeneticVariation BEFREE This study showed a significant association between PTX3 rs1840680 polymorphisms and the susceptibility of pulmonary aspergillosis in patients with COPD. 29020397 2018
dbSNP: rs2305619
rs2305619
Entrez Id: 5806;79674
Gene Symbol: PTX3;VEPH1
PTX3;VEPH1
CUI: C0011881
Disease:
Diabetic Nephropathy
0.010 GeneticVariation BEFREE Patients with the GG variant of rs2305619 showed 4.078-fold higher susceptibility to DN than those with the AA variant (OR=4.078, 95% CI=1.370-12.135, p=0.012); patients with the AA variant of rs2120243 had a lower risk of developing DN (OR=0.213, 95% CI=0.055-0.826, p=0.025). 28119515 2017
dbSNP: rs3816527
rs3816527
Entrez Id: 5806;79674
Gene Symbol: PTX3;VEPH1
PTX3;VEPH1
CUI: C1561643
Disease:
Chronic Kidney Diseases
0.010 GeneticVariation BEFREE Pentraxin 3 AA genotype SNP rs3816527 can be considered as a potential biomarker and a risk factor for CKD patients, especially hypertensive patients, and specifically as an independent predictor of hypertension in CKD. 27838804 2017
dbSNP: rs3816527
rs3816527
Entrez Id: 5806;79674
Gene Symbol: PTX3;VEPH1
PTX3;VEPH1
CUI: C0020538
Disease:
Hypertensive disease
0.010 GeneticVariation BEFREE Pentraxin 3 AA genotype SNP rs3816527 can be considered as a potential biomarker and a risk factor for CKD patients, especially hypertensive patients, and specifically as an independent predictor of hypertension in CKD. 27838804 2017
dbSNP: rs2305619
rs2305619
Entrez Id: 5806;79674
Gene Symbol: PTX3;VEPH1
PTX3;VEPH1
CUI: C2239176
Disease:
Liver carcinoma
0.010 GeneticVariation BEFREE In addition, PTX3 rs2305619 polymorphism and plasma levels were correlated with Child-Pugh scores B and C in HCC individuals. 26400151 2016
dbSNP: rs3816527
rs3816527
Entrez Id: 5806;79674
Gene Symbol: PTX3;VEPH1
PTX3;VEPH1
CUI: C0038013
Disease:
Ankylosing spondylitis
0.010 GeneticVariation BEFREE RESULTS CC genotype of rs3816527 had an obviously higher frequency in cases than in controls and had a positive effect on AS occurrence (OR=3.14, 95%CI=1.04-9.52), and the same was true of the C allele in rs3816527. 27538101 2016
dbSNP: rs3845978
rs3845978
Entrez Id: 5806;79674
Gene Symbol: PTX3;VEPH1
PTX3;VEPH1
CUI: C0038013
Disease:
Ankylosing spondylitis
0.010 GeneticVariation BEFREE For rs3845978, CT genotype showed a significant frequency difference between the case and control groups (P=0.03) and people with genotypes carrying the T allele developed AS earlier (OR=1.94, 95%CI=1.09-3.47), and the same was found in the analysis of the T allele. 27538101 2016
dbSNP: rs3816527
rs3816527
Entrez Id: 5806;79674
Gene Symbol: PTX3;VEPH1
PTX3;VEPH1
CUI: C0149931
Disease:
Migraine Disorders
0.010 GeneticVariation BEFREE In conclusion our results showed the association between the PTX3 rs3816527 gene polymorphism with susceptibility to migraine only in the male patients. 25604633 2015
dbSNP: rs2305619
rs2305619
Entrez Id: 5806;79674
Gene Symbol: PTX3;VEPH1
PTX3;VEPH1
CUI: C1800706
Disease:
Idiopathic Pulmonary Fibrosis
0.010 GeneticVariation BEFREE The minor allele of rs2305619 was significantly associated with higher plasma PTX3 levels measured pretransplantation (P = 0.014) and at 24 hours (P = 0.047) after transplantation in patients with idiopathic pulmonary fibrosis. 22822025 2012
dbSNP: rs757818668
rs757818668
Entrez Id: 5806;79674
Gene Symbol: PTX3;VEPH1
PTX3;VEPH1
CUI: C0027051
Disease:
Myocardial Infarction
0.010 GeneticVariation BEFREE The association of the D299G polymorphism of the TLR-4 gene with the progression of coronary and carotid atherosclerosis, risk of cardiovascular events and myocardial infarction is controversial. 15953129 2005
dbSNP: rs757818668
rs757818668
Entrez Id: 5806;79674
Gene Symbol: PTX3;VEPH1
PTX3;VEPH1
CUI: C0577631
Disease:
Carotid Atherosclerosis
0.010 GeneticVariation BEFREE The presence of the D299G and T399I polymorphisms of the TLR-4 gene does not play a major role on the progression of carotid atherosclerosis. 15953129 2005