RAG2, recombination activating 2, 5897

N. diseases: 207; N. variants: 44
Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs104894282
rs104894282
Entrez Id: 5896;5897
Gene Symbol: RAG1;RAG2
RAG1;RAG2
CUI: C1867362
Disease:
SEVERE COMBINED IMMUNODEFICIENCY, B CELL-NEGATIVE
T 0.700 CausalMutation CLINVAR
dbSNP: rs104894283
rs104894283
Entrez Id: 5896;5897
Gene Symbol: RAG1;RAG2
RAG1;RAG2
CUI: C1867362
Disease:
SEVERE COMBINED IMMUNODEFICIENCY, B CELL-NEGATIVE
G 0.700 CausalMutation CLINVAR
dbSNP: rs104894287
rs104894287
Entrez Id: 5896;5897
Gene Symbol: RAG1;RAG2
RAG1;RAG2
CUI: C1835931
Disease:
ALPHA/BETA T-CELL LYMPHOPENIA WITH GAMMA/DELTA T-CELL EXPANSION, SEVERE CYTOMEGALOVIRUS INFECTION, AND AUTOIMMUNITY
T 0.800 CausalMutation CLINVAR
dbSNP: rs104894287
rs104894287
Entrez Id: 5896;5897
Gene Symbol: RAG1;RAG2
RAG1;RAG2
CUI: C1835931
Disease:
ALPHA/BETA T-CELL LYMPHOPENIA WITH GAMMA/DELTA T-CELL EXPANSION, SEVERE CYTOMEGALOVIRUS INFECTION, AND AUTOIMMUNITY
0.800 GeneticVariation UNIPROT A novel immunodeficiency associated with hypomorphic RAG1 mutations and CMV infection. 16276422 2005
dbSNP: rs104894287
rs104894287
Entrez Id: 5896;5897
Gene Symbol: RAG1;RAG2
RAG1;RAG2
CUI: C1274233
Disease:
T-lymphocyte immunodeficiency
0.010 GeneticVariation BEFREE We hypothesize that the R841W mutation causes a malfunction of RAG1 that has differential outcome on V(D)J recombination in B and T cells, as the patient had normal B cell numbers but suffered severe alpha-beta T-cell immunodeficiency. 18592361 2008
dbSNP: rs104894287
rs104894287
Entrez Id: 5896;5897
Gene Symbol: RAG1;RAG2
RAG1;RAG2
CUI: C1849236
Disease:
Severe combined immunodeficiency, atypical
0.010 GeneticVariation BEFREE These presentations are consistent with atypical severe combined immunodeficiency (SCID)/Omenn Syndrome and the diagnosis was confirmed by demonstration of homozygosity for the R841W mutation in the catalytic core of RAG1. 18592361 2008
dbSNP: rs104894287
rs104894287
Entrez Id: 5896;5897
Gene Symbol: RAG1;RAG2
RAG1;RAG2
CUI: C0085110
Disease:
Severe Combined Immunodeficiency
0.010 GeneticVariation BEFREE These presentations are consistent with atypical severe combined immunodeficiency (SCID)/Omenn Syndrome and the diagnosis was confirmed by demonstration of homozygosity for the R841W mutation in the catalytic core of RAG1. 18592361 2008
dbSNP: rs104894287
rs104894287
Entrez Id: 5896;5897
Gene Symbol: RAG1;RAG2
RAG1;RAG2
CUI: C2700553
Disease:
Omenn Syndrome
0.010 GeneticVariation BEFREE These presentations are consistent with atypical severe combined immunodeficiency (SCID)/Omenn Syndrome and the diagnosis was confirmed by demonstration of homozygosity for the R841W mutation in the catalytic core of RAG1. 18592361 2008
dbSNP: rs104894288
rs104894288
Entrez Id: 5896;5897
Gene Symbol: RAG1;RAG2
RAG1;RAG2
CUI: C1835931
Disease:
ALPHA/BETA T-CELL LYMPHOPENIA WITH GAMMA/DELTA T-CELL EXPANSION, SEVERE CYTOMEGALOVIRUS INFECTION, AND AUTOIMMUNITY
0.800 GeneticVariation UNIPROT A novel immunodeficiency associated with hypomorphic RAG1 mutations and CMV infection. 16276422 2005
dbSNP: rs104894288
rs104894288
Entrez Id: 5896;5897
Gene Symbol: RAG1;RAG2
RAG1;RAG2
CUI: C1835931
Disease:
ALPHA/BETA T-CELL LYMPHOPENIA WITH GAMMA/DELTA T-CELL EXPANSION, SEVERE CYTOMEGALOVIRUS INFECTION, AND AUTOIMMUNITY
C 0.800 CausalMutation CLINVAR
dbSNP: rs104894290
rs104894290
Entrez Id: 5896;5897
Gene Symbol: RAG1;RAG2
RAG1;RAG2
CUI: C2700553
Disease:
Omenn Syndrome
0.800 GeneticVariation UNIPROT Molecular analysis of T-B-NK+ severe combined immunodeficiency and Omenn syndrome cases in Saudi Arabia. 19912631 2009
dbSNP: rs104894290
rs104894290
Entrez Id: 5896;5897
Gene Symbol: RAG1;RAG2
RAG1;RAG2
CUI: C2700553
Disease:
Omenn Syndrome
G 0.800 CausalMutation CLINVAR
dbSNP: rs104894290
rs104894290
Entrez Id: 5896;5897
Gene Symbol: RAG1;RAG2
RAG1;RAG2
CUI: C2700553
Disease:
Omenn Syndrome
0.800 GeneticVariation UNIPROT V(D)J recombination defects in lymphocytes due to RAG mutations: severe immunodeficiency with a spectrum of clinical presentations. 11133745 2001
dbSNP: rs104894290
rs104894290
Entrez Id: 5896;5897
Gene Symbol: RAG1;RAG2
RAG1;RAG2
CUI: C2700553
Disease:
Omenn Syndrome
0.800 GeneticVariation UNIPROT Characterization of immune function and analysis of RAG gene mutations in Omenn syndrome and related disorders. 10606976 2000
dbSNP: rs104894290
rs104894290
Entrez Id: 5896;5897
Gene Symbol: RAG1;RAG2
RAG1;RAG2
CUI: C2700553
Disease:
Omenn Syndrome
0.800 GeneticVariation UNIPROT Novel mutations in RAG1/2 and ADA genes in Israeli patients presenting with T-B-SCID or Omenn syndrome. 21624848 2011
dbSNP: rs104894290
rs104894290
Entrez Id: 5896;5897
Gene Symbol: RAG1;RAG2
RAG1;RAG2
CUI: C2700553
Disease:
Omenn Syndrome
0.800 GeneticVariation UNIPROT Partial V(D)J recombination activity leads to Omenn syndrome. 9630231 1998
dbSNP: rs104894290
rs104894290
Entrez Id: 5896;5897
Gene Symbol: RAG1;RAG2
RAG1;RAG2
CUI: C2700553
Disease:
Omenn Syndrome
0.800 GeneticVariation UNIPROT Clinical characteristics and molecular analysis of three Chinese children with Omenn syndrome. 21771083 2011
dbSNP: rs1064793251
rs1064793251
Entrez Id: 5897;119710
Gene Symbol: RAG2;IFTAP
RAG2;IFTAP
CUI: C0398686
Disease:
Primary immune deficiency disorder
T 0.700 CausalMutation CLINVAR
dbSNP: rs1204766339
rs1204766339
Entrez Id: 5896;5897;119710
Gene Symbol: RAG1;RAG2;IFTAP
RAG1;RAG2;IFTAP
CUI: C0398686
Disease:
Primary immune deficiency disorder
G 0.700 GeneticVariation CLINVAR A novel homozygous mutation in recombination activating gene 2 in 2 relatives with different clinical phenotypes: Omenn syndrome and hyper-IgM syndrome. 22841008 2012
dbSNP: rs1204766339
rs1204766339
Entrez Id: 5896;5897;119710
Gene Symbol: RAG1;RAG2;IFTAP
RAG1;RAG2;IFTAP
CUI: C2700553
Disease:
Omenn Syndrome
G 0.700 GeneticVariation CLINVAR A novel homozygous mutation in recombination activating gene 2 in 2 relatives with different clinical phenotypes: Omenn syndrome and hyper-IgM syndrome. 22841008 2012
dbSNP: rs1204766339
rs1204766339
Entrez Id: 5896;5897;119710
Gene Symbol: RAG1;RAG2;IFTAP
RAG1;RAG2;IFTAP
CUI: C2700553
Disease:
Omenn Syndrome
G 0.700 GeneticVariation CLINVAR Broad-spectrum antibodies against self-antigens and cytokines in RAG deficiency. 26457731 2015
dbSNP: rs1204766339
rs1204766339
Entrez Id: 5896;5897;119710
Gene Symbol: RAG1;RAG2;IFTAP
RAG1;RAG2;IFTAP
CUI: C0398686
Disease:
Primary immune deficiency disorder
G 0.700 GeneticVariation CLINVAR Broad-spectrum antibodies against self-antigens and cytokines in RAG deficiency. 26457731 2015
dbSNP: rs121917894
rs121917894
Entrez Id: 5897;119710
Gene Symbol: RAG2;IFTAP
RAG2;IFTAP
CUI: C1832322
Disease:
Severe Combined Immunodeficiency, Autosomal Recessive, T Cell-Negative, B Cell-Negative, NK Cell-Positive
0.700 GeneticVariation UNIPROT RAG mutations in human B cell-negative SCID. 8810255 1996
dbSNP: rs121917894
rs121917894
Entrez Id: 5897;119710
Gene Symbol: RAG2;IFTAP
RAG2;IFTAP
CUI: C2700553
Disease:
Omenn Syndrome
0.040 GeneticVariation BEFREE While Rag2-R229Q mutation under some conditions may cause severe immunological and clinical phenotypes similar to human SCID or OS, R229Q mutation per se did not cause severe immunodeficiency in mice, suggesting that additional factors other than R229Q mutation are required to induce severe immunodeficiency. 30872621 2019
dbSNP: rs121917894
rs121917894
Entrez Id: 5897;119710
Gene Symbol: RAG2;IFTAP
RAG2;IFTAP
CUI: C2700553
Disease:
Omenn Syndrome
0.040 GeneticVariation BEFREE In conclusion, Rag2(R229Q/R229Q) mice mimicked most symptoms of human OS; our findings support the notion that impaired immune tolerance and defective immune regulation are involved in the pathophysiology of OS. 17476358 2007