SMO, smoothened, frizzled class receptor, 6608

N. diseases: 215; N. variants: 13
Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs1061280
rs1061280
Entrez Id: 6608
Gene Symbol: SMO
SMO
CUI: C0014868
Disease:
Esophagitis
0.010 GeneticVariation BEFREE Patients with the AG+GG genotype of SMO:rs1061280 had an 81% reduced risk of developing esophagitis (OR: 0.19, 95% CI: 0.07-0.53, p = 0.001, q = 0.06). 26991123 2016
dbSNP: rs1061285
rs1061285
Entrez Id: 6608
Gene Symbol: SMO
SMO
CUI: C0014868
Disease:
Esophagitis
0.010 GeneticVariation BEFREE After multiple comparison correction, RPS6KB2:rs10274, SMO:rs1061280, SMO:rs1061285 remained significantly associated with esophagitis, while processing gene DGCR8:rs720014, DGCR8:rs3757, DGCR8:rs1633445 remained significantly associated with pneumonitis. 26991123 2016
dbSNP: rs1061285
rs1061285
Entrez Id: 6608
Gene Symbol: SMO
SMO
CUI: C3714636
Disease:
Pneumonitis
0.010 GeneticVariation BEFREE After multiple comparison correction, RPS6KB2:rs10274, SMO:rs1061280, SMO:rs1061285 remained significantly associated with esophagitis, while processing gene DGCR8:rs720014, DGCR8:rs3757, DGCR8:rs1633445 remained significantly associated with pneumonitis. 26991123 2016
dbSNP: rs121918347
rs121918347
Entrez Id: 6608
Gene Symbol: SMO
SMO
CUI: C3838465
Disease:
BASAL CELL CARCINOMA, SOMATIC
T 0.700 CausalMutation CLINVAR
dbSNP: rs121918347
rs121918347
Entrez Id: 6608
Gene Symbol: SMO
SMO
CUI: C4721806
Disease:
Carcinoma, Basal Cell
0.700 GeneticVariation UNIPROT
dbSNP: rs121918347
rs121918347
Entrez Id: 6608
Gene Symbol: SMO
SMO
CUI: C1335107
Disease:
Olfactory Groove Meningioma
0.010 GeneticVariation BEFREE Molecular diagnosis of SMOL412F/W535L and AKT1E17K mutations improves prognostic evaluation in olfactory groove meningiomas and opens new therapeutic perspectives with SMO or AKT inhibitors for recurrent cases. 28082415 2017
dbSNP: rs121918347
rs121918347
Entrez Id: 6608
Gene Symbol: SMO
SMO
CUI: C0025286
Disease:
Meningioma
0.010 GeneticVariation BEFREE A subset of meningiomas lacking NF2 alterations harbored recurrent oncogenic mutations in AKT1 (p.Glu17Lys) and SMO (p.Trp535Leu) and exhibited immunohistochemical evidence of activation of these pathways. 23334667 2013
dbSNP: rs121918348
rs121918348
Entrez Id: 6608
Gene Symbol: SMO
SMO
CUI: C3838465
Disease:
BASAL CELL CARCINOMA, SOMATIC
A 0.700 CausalMutation CLINVAR
dbSNP: rs121918348
rs121918348
Entrez Id: 6608
Gene Symbol: SMO
SMO
CUI: C4721806
Disease:
Carcinoma, Basal Cell
0.700 GeneticVariation UNIPROT
dbSNP: rs143083812
rs143083812
Entrez Id: 6608
Gene Symbol: SMO
SMO
CUI: C0029410
Disease:
Osteoarthritis of hip
T 0.710 GeneticVariation GWASCAT Two associations are between rare or low-frequency missense variants and hip osteoarthritis, affecting the genes SMO (rs143083812, frequency 0.11%, odds ratio (OR) = 2.8, P = 7.9 × 10<sup>-12</sup>, p.Arg173Cys) and IL11 (rs4252548, frequency 2.08%, OR = 1.30, P = 2.1 × 10<sup>-11</sup>, p.Arg112His). 30374069 2018
dbSNP: rs143083812
rs143083812
Entrez Id: 6608
Gene Symbol: SMO
SMO
CUI: C0029410
Disease:
Osteoarthritis of hip
0.710 GeneticVariation BEFREE Two associations are between rare or low-frequency missense variants and hip osteoarthritis, affecting the genes SMO (rs143083812, frequency 0.11%, odds ratio (OR) = 2.8, P = 7.9 × 10<sup>-12</sup>, p.Arg173Cys) and IL11 (rs4252548, frequency 2.08%, OR = 1.30, P = 2.1 × 10<sup>-11</sup>, p.Arg112His). 30374069 2018
dbSNP: rs17710891
rs17710891
Entrez Id: 6608
Gene Symbol: SMO
SMO
CUI: C4721806
Disease:
Carcinoma, Basal Cell
C 0.700 CausalMutation CLINVAR Smoothened variants explain the majority of drug resistance in basal cell carcinoma. 25759020 2015
dbSNP: rs17710891
rs17710891
Entrez Id: 6608
Gene Symbol: SMO
SMO
CUI: C4721806
Disease:
Carcinoma, Basal Cell
C 0.700 CausalMutation CLINVAR Vismodegib. 22679179 2012
dbSNP: rs17710891
rs17710891
Entrez Id: 6608
Gene Symbol: SMO
SMO
CUI: C0025149
Disease:
Medulloblastoma
C 0.700 CausalMutation CLINVAR Smoothened mutation confers resistance to a Hedgehog pathway inhibitor in medulloblastoma. 19726788 2009
dbSNP: rs17710891
rs17710891
Entrez Id: 6608
Gene Symbol: SMO
SMO
CUI: C0025149
Disease:
Medulloblastoma
C 0.700 CausalMutation CLINVAR Vismodegib. 22679179 2012
dbSNP: rs17710891
rs17710891
Entrez Id: 6608
Gene Symbol: SMO
SMO
CUI: C4721806
Disease:
Carcinoma, Basal Cell
C 0.700 CausalMutation CLINVAR Smoothened mutation confers resistance to a Hedgehog pathway inhibitor in medulloblastoma. 19726788 2009
dbSNP: rs3824
rs3824
Entrez Id: 6608
Gene Symbol: SMO
SMO
CUI: C2239176
Disease:
Liver carcinoma
0.010 GeneticVariation BEFREE In multivariate logistic regression analysis, TNM stage (p = 0.001), recipient SMO rs3824 genotype (CG vs. CC/GG p = 0.001), and histologic grade (p = 0.019) were identified as independent risk factors of HCC recurrence. 25944162 2015
dbSNP: rs41303402
rs41303402
Entrez Id: 6608
Gene Symbol: SMO
SMO
CUI: C4721806
Disease:
Carcinoma, Basal Cell
0.010 GeneticVariation BEFREE Other genotypes, such as the TT in SHH rs104894049 331 A/T and the GG in SMO rs41303402 385 G/A also statistically raised the risk of BCC, but these associations were weaker. 26590974 2016
dbSNP: rs41303402
rs41303402
Entrez Id: 6608
Gene Symbol: SMO
SMO
CUI: C3811653
Disease:
Experimental Organism Basal Cell Carcinoma
0.010 GeneticVariation BEFREE Other genotypes, such as the TT in SHH rs104894049 331 A/T and the GG in SMO rs41303402 385 G/A also statistically raised the risk of BCC, but these associations were weaker. 26590974 2016
dbSNP: rs41303402
rs41303402
Entrez Id: 6608
Gene Symbol: SMO
SMO
CUI: C4721806
Disease:
Carcinoma, Basal Cell
0.010 GeneticVariation BEFREE Other genotypes, such as the TT in SHH rs104894049 331 A/T and the GG in SMO rs41303402 385 G/A also statistically raised the risk of BCC, but these associations were weaker. 26590974 2016
dbSNP: rs41303402
rs41303402
Entrez Id: 6608
Gene Symbol: SMO
SMO
CUI: C3811653
Disease:
Experimental Organism Basal Cell Carcinoma
0.010 GeneticVariation BEFREE Other genotypes, such as the TT in SHH rs104894049 331 A/T and the GG in SMO rs41303402 385 G/A also statistically raised the risk of BCC, but these associations were weaker. 26590974 2016
dbSNP: rs578002520
rs578002520
Entrez Id: 6608
Gene Symbol: SMO
SMO
CUI: C0266525
Disease:
Irido-corneal dysgenesis
0.010 GeneticVariation BEFREE Here we reported the first identification of compound heterozygous mutations (c.G338A; p.R113Q and c.C1619T; p.A540V) in the SMO gene in a patient with both anterior segment dysgenesis (congenital corneal opacity, cataract) and morning glory syndrome, using trio-based whole exome sequencing. 31301482 2019
dbSNP: rs578002520
rs578002520
Entrez Id: 6608
Gene Symbol: SMO
SMO
CUI: C0344535
Disease:
Congenital corneal opacity
0.010 GeneticVariation BEFREE Here we reported the first identification of compound heterozygous mutations (c.G338A; p.R113Q and c.C1619T; p.A540V) in the SMO gene in a patient with both anterior segment dysgenesis (congenital corneal opacity, cataract) and morning glory syndrome, using trio-based whole exome sequencing. 31301482 2019
dbSNP: rs578002520
rs578002520
Entrez Id: 6608
Gene Symbol: SMO
SMO
CUI: C0549307
Disease:
Morning glory syndrome
0.010 GeneticVariation BEFREE Here we reported the first identification of compound heterozygous mutations (c.G338A; p.R113Q and c.C1619T; p.A540V) in the SMO gene in a patient with both anterior segment dysgenesis (congenital corneal opacity, cataract) and morning glory syndrome, using trio-based whole exome sequencing. 31301482 2019
dbSNP: rs770138808
rs770138808
Entrez Id: 6608
Gene Symbol: SMO
SMO
CUI: C0007129
Disease:
Merkel cell carcinoma
0.010 GeneticVariation BEFREE The high rate of c.576G>A silent mutation in GLI1 exon 5 was a feature of MCC. 28551328 2017