TCF4, transcription factor 4, 6925

N. diseases: 378; N. variants: 111
Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs1261117
rs1261117
Entrez Id: 6925
Gene Symbol: TCF4
TCF4
CUI: C0036341
Disease:
Schizophrenia
T 0.800 GeneticVariation GWASDB A comprehensive family-based replication study of schizophrenia genes. 23894747 2013
dbSNP: rs1261117
rs1261117
Entrez Id: 6925
Gene Symbol: TCF4
TCF4
CUI: C0036341
Disease:
Schizophrenia
T 0.800 GeneticVariation GWASCAT A comprehensive family-based replication study of schizophrenia genes. 23894747 2013
dbSNP: rs9960767
rs9960767
Entrez Id: 6925
Gene Symbol: TCF4
TCF4
CUI: C0036341
Disease:
Schizophrenia
0.880 GeneticVariation BEFREE As measured by prepulse inhibition, the schizophrenia risk allele C of TCF4 rs9960767 reduces sensorimotor gating. 21932083 2011
dbSNP: rs9636107
rs9636107
Entrez Id: 6925
Gene Symbol: TCF4
TCF4
CUI: C0036341
Disease:
Schizophrenia
0.700 GeneticVariation GWASCAT Association of Schizophrenia Risk With Disordered Niacin Metabolism in an Indian Genome-wide Association Study. 31268507 2019
dbSNP: rs9636107
rs9636107
Entrez Id: 6925
Gene Symbol: TCF4
TCF4
CUI: C0036341
Disease:
Schizophrenia
G 0.700 GeneticVariation GWASCAT Biological insights from 108 schizophrenia-associated genetic loci. 25056061 2014
dbSNP: rs17594526
rs17594526
Entrez Id: 6925
Gene Symbol: TCF4
TCF4
CUI: C0036341
Disease:
Schizophrenia
T 0.800 GeneticVariation GWASDB Common polygenic variation contributes to risk of schizophrenia and bipolar disorder. 19571811 2009
dbSNP: rs17594526
rs17594526
Entrez Id: 6925
Gene Symbol: TCF4
TCF4
CUI: C0036341
Disease:
Schizophrenia
T 0.800 GeneticVariation GWASCAT Common polygenic variation contributes to risk of schizophrenia and bipolar disorder. 19571811 2009
dbSNP: rs9960767
rs9960767
Entrez Id: 6925
Gene Symbol: TCF4
TCF4
CUI: C0036341
Disease:
Schizophrenia
0.880 GeneticVariation GWASDB Common variants at VRK2 and TCF4 conferring risk of schizophrenia. 21791550 2011
dbSNP: rs9960767
rs9960767
Entrez Id: 6925
Gene Symbol: TCF4
TCF4
CUI: C0036341
Disease:
Schizophrenia
C 0.880 GeneticVariation GWASDB Common variants conferring risk of schizophrenia. 19571808 2009
dbSNP: rs9960767
rs9960767
Entrez Id: 6925
Gene Symbol: TCF4
TCF4
CUI: C0036341
Disease:
Schizophrenia
C 0.880 GeneticVariation GWASCAT Common variants conferring risk of schizophrenia. 19571808 2009
dbSNP: rs1452787
rs1452787
Entrez Id: 6925
Gene Symbol: TCF4
TCF4
CUI: C0036341
Disease:
Schizophrenia
0.010 GeneticVariation BEFREE Further interaction and stratification analysis suggested that rs1452787 was notably correlated with increased SCZ risk in males (OR = 2.77, 95%CI = 1.43-5.35, P = 0.002). 27103199 2016
dbSNP: rs17598729
rs17598729
Entrez Id: 6925
Gene Symbol: TCF4
TCF4
CUI: C0036341
Disease:
Schizophrenia
C 0.700 GeneticVariation GWASCAT Genome-Wide Association Study Detected Novel Susceptibility Genes for Schizophrenia and Shared Trans-Populations/Diseases Genetic Effect. 30285260 2019
dbSNP: rs9636107
rs9636107
Entrez Id: 6925
Gene Symbol: TCF4
TCF4
CUI: C0036341
Disease:
Schizophrenia
G 0.700 GeneticVariation GWASCAT Genome-Wide Association Study Detected Novel Susceptibility Genes for Schizophrenia and Shared Trans-Populations/Diseases Genetic Effect. 30285260 2019
dbSNP: rs17512836
rs17512836
Entrez Id: 6925
Gene Symbol: TCF4
TCF4
CUI: C0036341
Disease:
Schizophrenia
C 0.810 GeneticVariation GWASDB Genome-wide association study identifies five new schizophrenia loci. 21926974 2011
dbSNP: rs17512836
rs17512836
Entrez Id: 6925
Gene Symbol: TCF4
TCF4
CUI: C0036341
Disease:
Schizophrenia
C 0.810 GeneticVariation GWASCAT Genome-wide association study identifies five new schizophrenia loci. 21926974 2011
dbSNP: rs17597926
rs17597926
Entrez Id: 6925
Gene Symbol: TCF4
TCF4
CUI: C0036341
Disease:
Schizophrenia
0.700 GeneticVariation GWASCAT Genome-wide association study in a Swedish population yields support for greater CNV and MHC involvement in schizophrenia compared with bipolar disorder. 22688191 2012
dbSNP: rs9636107
rs9636107
Entrez Id: 6925
Gene Symbol: TCF4
TCF4
CUI: C0036341
Disease:
Schizophrenia
G 0.700 GeneticVariation GWASCAT Genome-wide association study of schizophrenia in Ashkenazi Jews. 26198764 2015
dbSNP: rs9960767
rs9960767
Entrez Id: 6925
Gene Symbol: TCF4
TCF4
CUI: C0036341
Disease:
Schizophrenia
0.880 GeneticVariation BEFREE Here, we replicated the four European GWAS hits, miR-137-rs1625579 and three of its validated target gene loci SNPs (ZNF804a-rs1344706, CACNA1C-rs4765905 and TCF4-rs9960767) by genotyping in 2074 samples (schizophrenia cases-1005; controls-1069) from South Indian Population. 29599094 2018
dbSNP: rs11152369
rs11152369
Entrez Id: 6925
Gene Symbol: TCF4
TCF4
CUI: C0036341
Disease:
Schizophrenia
A 0.700 GeneticVariation GWASCAT Identification of risk loci with shared effects on five major psychiatric disorders: a genome-wide analysis. 23453885 2013
dbSNP: rs12954356
rs12954356
Entrez Id: 6925
Gene Symbol: TCF4
TCF4
CUI: C0036341
Disease:
Schizophrenia
0.700 GeneticVariation GWASCAT Meta-analysis of GWAS of over 16,000 individuals with autism spectrum disorder highlights a novel locus at 10q24.32 and a significant overlap with schizophrenia. 28540026 2017
dbSNP: rs9636107
rs9636107
Entrez Id: 6925
Gene Symbol: TCF4
TCF4
CUI: C0036341
Disease:
Schizophrenia
0.700 GeneticVariation GWASCAT Meta-analysis of GWAS of over 16,000 individuals with autism spectrum disorder highlights a novel locus at 10q24.32 and a significant overlap with schizophrenia. 28540026 2017
dbSNP: rs9960767
rs9960767
Entrez Id: 6925
Gene Symbol: TCF4
TCF4
CUI: C0036341
Disease:
Schizophrenia
0.880 GeneticVariation BEFREE P50 suppression was significantly decreased in carriers of schizophrenia risk alleles of the TCF4 polymorphisms rs9960767, rs10401120rs, rs17597926, and 17512836 (P < 0.0002-0.00005). 22451930 2012
dbSNP: rs9636107
rs9636107
Entrez Id: 6925
Gene Symbol: TCF4
TCF4
CUI: C0036341
Disease:
Schizophrenia
0.700 GeneticVariation GWASCAT Pleiotropic Meta-Analysis of Cognition, Education, and Schizophrenia Differentiates Roles of Early Neurodevelopmental and Adult Synaptic Pathways. 31374203 2019
dbSNP: rs9960767
rs9960767
Entrez Id: 6925
Gene Symbol: TCF4
TCF4
CUI: C0036341
Disease:
Schizophrenia
0.880 GeneticVariation BEFREE Single nucleotide polymorphisms in TCF4 gene have been consistently associated with schizophrenia in genome wide association studies, including the C allele of rs9960767. 24275585 2014
dbSNP: rs17512836
rs17512836
Entrez Id: 6925
Gene Symbol: TCF4
TCF4
CUI: C0036341
Disease:
Schizophrenia
0.810 GeneticVariation BEFREE The analyses on the 28 individual SNPs previously associated with schizophrenia found that two SNPs in TCF4 returned a significant association with the SPEQ Paranoia dimension, rs17512836 (p-value = 2.57×10⁻⁴) and rs9960767 (p-value = 6.23×10⁻⁴). 24718684 2014