TNF, tumor necrosis factor, 7124

N. diseases: 2724; N. variants: 31
Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs1800750
rs1800750
Entrez Id: 7124
Gene Symbol: TNF
TNF
CUI: C0023467
Disease:
Leukemia, Myelocytic, Acute
0.010 GeneticVariation BEFREE Age above 65 years, PLT count, TNF-α rs1800750 variant genotype, blast percentage, LDH level, and cytogenetic high-risk may be used as independent risk factors to assess AML mortality. 31373163 2019
dbSNP: rs361525
rs361525
Entrez Id: 7124
Gene Symbol: TNF
TNF
CUI: C0032463
Disease:
Polycythemia Vera
0.010 GeneticVariation BEFREE To detect the single nucleotide polymorphisms (SNPs), <i>IL-1</i>α (rs1800587), <i>IL-1</i>β (rs1143627, rs16944, rs1143634), <i>IL-8</i> (rs4073), and <i>TNF-</i>α (rs1799964, rs1800630, rs1799724, and rs361525) genes were genotyped in BP patients and healthy controls as well as <i>IL-8</i> (rs4073) in pemphigus vulgaris (PV) patients. 31001258 2019
dbSNP: rs361525
rs361525
Entrez Id: 7124
Gene Symbol: TNF
TNF
CUI: C0030809
Disease:
Pemphigus Vulgaris
0.010 GeneticVariation BEFREE To detect the single nucleotide polymorphisms (SNPs), <i>IL-1</i>α (rs1800587), <i>IL-1</i>β (rs1143627, rs16944, rs1143634), <i>IL-8</i> (rs4073), and <i>TNF-</i>α (rs1799964, rs1800630, rs1799724, and rs361525) genes were genotyped in BP patients and healthy controls as well as <i>IL-8</i> (rs4073) in pemphigus vulgaris (PV) patients. 31001258 2019
dbSNP: rs361525
rs361525
Entrez Id: 7124
Gene Symbol: TNF
TNF
CUI: C0242383
Disease:
Age related macular degeneration
0.010 GeneticVariation BEFREE To study polymorphisms in promotor regions of <i>tumor necrosis factor (TNF)-α TNF-863A/C</i> (rs1800630), <i>TNF-308A/G</i> (rs1800629), and <i>TNF-238A/G</i> (rs361525) in patients with age-related macular degeneration (AMD) and associations of complex <i>TNF-α</i> genotypes with AMD. 30662836 2019
dbSNP: rs361525
rs361525
Entrez Id: 7124
Gene Symbol: TNF
TNF
CUI: C0017601
Disease:
Glaucoma
0.010 GeneticVariation BEFREE Thus present study aimed to analyze the association of TNF-α promoter region alterations (c.-238G>A (rs361525), c.-308G>A (rs1800629), c.-857C>T (rs1799724) and c.-863C>A (rs1800630)) with glaucoma in north Indian cohort. 31132515 2019
dbSNP: rs361525
rs361525
Entrez Id: 7124
Gene Symbol: TNF
TNF
CUI: C1609538
Disease:
Latent Tuberculosis
0.010 GeneticVariation BEFREE We tested the single-nucleotide polymorphisms (SNPs) rs5743708 (TLR2), rs4986791 (TLR4), rs361525 (TNFA), rs2430561 (IFNG) rs1143627 (IL1B) as risk factors for tuberculin skin test (TST) conversion or development of active TB in contacts of active TB cases. 30481307 2019
dbSNP: rs763000109
rs763000109
Entrez Id: 7124
Gene Symbol: TNF
TNF
CUI: C0028754
Disease:
Obesity
0.010 GeneticVariation BEFREE The MnSOD Ala16Val single nucleotide polymorphism (SNP) has shown to be associated to inflammatory pathways and many metabolic disorders, such as obesity and dyslipidemia. 31212050 2019
dbSNP: rs763000109
rs763000109
Entrez Id: 7124
Gene Symbol: TNF
TNF
CUI: C0524620
Disease:
Metabolic Syndrome X
0.010 GeneticVariation BEFREE Thus, we investigated the relationship between MnSOD Ala16Val SNP with epilepsy and its influence on MetS, inflammation, apoptosis and DNA damage parameters. 31212050 2019
dbSNP: rs763000109
rs763000109
Entrez Id: 7124
Gene Symbol: TNF
TNF
CUI: C0242339
Disease:
Dyslipidemias
0.010 GeneticVariation BEFREE The MnSOD Ala16Val single nucleotide polymorphism (SNP) has shown to be associated to inflammatory pathways and many metabolic disorders, such as obesity and dyslipidemia. 31212050 2019
dbSNP: rs763000109
rs763000109
Entrez Id: 7124
Gene Symbol: TNF
TNF
CUI: C0036572
Disease:
Seizures
0.010 GeneticVariation BEFREE Involvement of MnSOD Ala16Val polymorphism in epilepsy: A relationship with seizure type, inflammation, and metabolic syndrome. 31212050 2019
dbSNP: rs763000109
rs763000109
Entrez Id: 7124
Gene Symbol: TNF
TNF
CUI: C0014544
Disease:
Epilepsy
0.010 GeneticVariation BEFREE Our findings suggest that the MnSOD Ala16Val SNP might have an important role in epilepsy, mainly in patients with generalized seizures and particularly with VV genotype. 31212050 2019
dbSNP: rs1363819544
rs1363819544
Entrez Id: 7124
Gene Symbol: TNF
TNF
CUI: C0522624
Disease:
Subcutaneous panniculitis-like T-cell lymphoma
0.010 GeneticVariation BEFREE We identify in ~60% of SPTCL cases germline, loss-of-function, missense variants altering highly conserved residues of TIM-3, c.245A>G (p.Tyr82Cys) and c.291A>G (p.Ile97Met), each with specific geographic distribution. 30374066 2018
dbSNP: rs1799724
rs1799724
Entrez Id: 4049;7124
Gene Symbol: LTA;TNF
LTA;TNF
CUI: C1269683
Disease:
Major Depressive Disorder
0.010 GeneticVariation BEFREE The aim of this study was to test whether rs1799724, an SNP of TNF-α, contributes to the neuroanatomical changes in MDD. 30310056 2018
dbSNP: rs1799724
rs1799724
Entrez Id: 4049;7124
Gene Symbol: LTA;TNF
LTA;TNF
CUI: C0036341
Disease:
Schizophrenia
0.010 GeneticVariation BEFREE Since growing evidences suggest the crucial and complex role of the tumor necrosis factor in the CNS, we have hypothesized that functional genetic variants of the LTA and TNFA genes (LTA +252A/G (rs909253) and TNFA -857C/T (rs1799724) and TNFA -238G/A (rs361525)) may be involved in the predisposition to schizophrenia. 30627222 2018
dbSNP: rs1799964
rs1799964
Entrez Id: 4049;7124;100287329
Gene Symbol: LTA;TNF;LOC100287329
LTA;TNF;LOC100287329
CUI: C0024143
Disease:
Lupus Nephritis
0.010 GeneticVariation BEFREE Here, we aimed to examine whether the TNF -238G/A, -308G/A, -376G/A (rs1800750), and -1031T/C (rs1799964) polymorphisms confer SLE or lupus nephritis (LN) susceptibility in a Mexican population. 29611038 2018
dbSNP: rs1799964
rs1799964
Entrez Id: 4049;7124;100287329
Gene Symbol: LTA;TNF;LOC100287329
LTA;TNF;LOC100287329
CUI: C0003873
Disease:
Rheumatoid Arthritis
0.010 GeneticVariation BEFREE The aim of this study was to determine whether the TNF -1031T/C (rs1799964), -376G/A (rs1800750), -308G/A (rs1800629) -238G/A (rs361525), and TNFR1 -609G/T polymorphisms are associated with RA susceptibility in a sample of Mexican patients. 29404828 2018
dbSNP: rs1799964
rs1799964
Entrez Id: 4049;7124;100287329
Gene Symbol: LTA;TNF;LOC100287329
LTA;TNF;LOC100287329
CUI: C0024141
Disease:
Lupus Erythematosus, Systemic
0.010 GeneticVariation BEFREE Here, we aimed to examine whether the TNF -238G/A, -308G/A, -376G/A (rs1800750), and -1031T/C (rs1799964) polymorphisms confer SLE or lupus nephritis (LN) susceptibility in a Mexican population. 29611038 2018
dbSNP: rs1799964
rs1799964
Entrez Id: 4049;7124;100287329
Gene Symbol: LTA;TNF;LOC100287329
LTA;TNF;LOC100287329
CUI: C0007847
Disease:
Malignant tumor of cervix
0.010 GeneticVariation BEFREE The frequency of A allele in rs1799964 was also higher for cervi</span>cal cancer group (38.3%) than control group (16.4%; odds ratio = 1.43, 95% confidence interval = 1.07-1.91, P < .05). 29940817 2018
dbSNP: rs1799964
rs1799964
Entrez Id: 4049;7124;100287329
Gene Symbol: LTA;TNF;LOC100287329
LTA;TNF;LOC100287329
CUI: C0699791
Disease:
Stomach Carcinoma
0.010 GeneticVariation BEFREE The study results revealed that IL-1β rs1143627: T > C, rs16944: C > T (p = 0.001;OR = 1.85; 95% CI 1.30-2.63) and rs1143633: G > A (p < 0.0001; OR = 2.53; 95% CI 1.67-3.83) and TNF-α rs1800630: C > A, rs1799964: T > C (p < 0.0001; OR = 2.31; 95% CI 1.54-3.46) polymorphisms significantly contributed toward GC risk. 30094865 2018
dbSNP: rs1799964
rs1799964
Entrez Id: 4049;7124;100287329
Gene Symbol: LTA;TNF;LOC100287329
LTA;TNF;LOC100287329
CUI: C0008707
Disease:
Chronic osteomyelitis
0.010 GeneticVariation BEFREE We reported for the first time that TNF-α gene SNP rs1799964 contributes to the elevated venture of extremity chronic osteomyelitis in China. 30259788 2018
dbSNP: rs1799964
rs1799964
Entrez Id: 4049;7124;100287329
Gene Symbol: LTA;TNF;LOC100287329
LTA;TNF;LOC100287329
CUI: C0040561
Disease:
Ocular Toxoplasmosis
0.010 GeneticVariation BEFREE This work evaluates the associations between polymorphisms in genes coding for the cytokines tumor necrosis factor alpha (TNF-α) (rs1799964, rs1800629, rs1799724, rs1800630, and rs361525), interleukin 1β (IL-1β) (rs16944, rs1143634, and rs1143627), IL-1α (rs1800587), gamma interferon (IFN-γ) (rs2430561), and IL-10 (rs1800896 and rs1800871) and the presence of ocular toxoplasmosis (OT) in a sample of a Colombian population (61 patients with OT and 116 healthy controls). 29426041 2018
dbSNP: rs1799964
rs1799964
Entrez Id: 4049;7124;100287329
Gene Symbol: LTA;TNF;LOC100287329
LTA;TNF;LOC100287329
CUI: C0024623
Disease:
Malignant neoplasm of stomach
0.010 GeneticVariation BEFREE The study results revealed that IL-1β rs1143627: T > C, rs16944: C > T (p = 0.001;OR = 1.85; 95% CI 1.30-2.63) and rs1143633: G > A (p < 0.0001; OR = 2.53; 95% CI 1.67-3.83) and TNF-α rs1800630: C > A, rs1799964: T > C (p < 0.0001; OR = 2.31; 95% CI 1.54-3.46) polymorphisms significantly contributed toward GC risk. 30094865 2018
dbSNP: rs1799964
rs1799964
Entrez Id: 4049;7124;100287329
Gene Symbol: LTA;TNF;LOC100287329
LTA;TNF;LOC100287329
CUI: C0302592
Disease:
Cervix carcinoma
0.010 GeneticVariation BEFREE The frequency of A allele in rs1799964 was also higher for cervi</span>cal cancer group (38.3%) than control group (16.4%; odds ratio = 1.43, 95% confidence interval = 1.07-1.91, P < .05). 29940817 2018
dbSNP: rs1799964
rs1799964
Entrez Id: 4049;7124;100287329
Gene Symbol: LTA;TNF;LOC100287329
LTA;TNF;LOC100287329
CUI: C4048328
Disease:
cervical cancer
0.010 GeneticVariation BEFREE The frequency of A allele in rs1799964 was also higher for cervi</span>cal cancer group (38.3%) than control group (16.4%; odds ratio = 1.43, 95% confidence interval = 1.07-1.91, P < .05). 29940817 2018
dbSNP: rs1799964
rs1799964
Entrez Id: 4049;7124;100287329
Gene Symbol: LTA;TNF;LOC100287329
LTA;TNF;LOC100287329
CUI: C0038013
Disease:
Ankylosing spondylitis
0.010 GeneticVariation BEFREE For rs1799964, the C allele was linked to reduced risk of AS (p < 0.0001, OR = 0.60, 95% CI = 0.50-0.71). 29230494 2018