TNFSF4, TNF superfamily member 4, 7292

N. diseases: 129; N. variants: 32
Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs4916219
rs4916219
Entrez Id: 7292;100506023
Gene Symbol: TNFSF4;LOC100506023
TNFSF4;LOC100506023
CUI: C0024141
Disease:
Lupus Erythematosus, Systemic
0.010 GeneticVariation BEFREE This replication effort confirmed five reported SLE susceptibility loci reaching genome-wide levels of significance (P(meta) <5.00 × 10(-08)): TNFSF4 (rs1418190, odds ratio (OR) = 0.81, P(meta) = 1.08 × 10(-08); rs4916219, OR = 0.80, P(meta )= 7.77 × 10(-09)), IRF8 (rs2934498, OR = 1.25, P(meta) = 4.97 × 10(-09)), miR-146a (rs2431697, OR = 0.69, P(meta) = 1.15 × 10(-22)), CD44 (rs2732547, OR = 0.82, P(meta) = 1.55 × 10(-11)), and TMEM39A (rs12494314, OR = 0.84, P(meta) = 1.01 × 10(-09)). 25890262 2015
dbSNP: rs7518045
rs7518045
Entrez Id: 7292
Gene Symbol: TNFSF4
TNFSF4
CUI: C0027051
Disease:
Myocardial Infarction
0.010 GeneticVariation BEFREE Our study showed that the A allele of the rs7518045 and haplotype rs3861950C-rs17346501C-rs7518045A-rs1234313G in the TNFSF4 gene were associated with decreased MI risk in a Chinese Han population. 26125814 2015
dbSNP: rs10489265
rs10489265
Entrez Id: 7292;100506023
Gene Symbol: TNFSF4;LOC100506023
TNFSF4;LOC100506023
CUI: C0409974
Disease:
Lupus Erythematosus
0.010 GeneticVariation BEFREE The SNPs of TNFSF4 were associated with renal involvement in lupus patients from the Chinese population (P values for rs2205960 and rs10489265 were 0.014 and 0.005 in additive model, resp.). 23936824 2013
dbSNP: rs10489265
rs10489265
Entrez Id: 7292;100506023
Gene Symbol: TNFSF4;LOC100506023
TNFSF4;LOC100506023
CUI: C0024131
Disease:
Lupus Vulgaris
0.010 GeneticVariation BEFREE The SNPs of TNFSF4 were associated with renal involvement in lupus patients from the Chinese population (P values for rs2205960 and rs10489265 were 0.014 and 0.005 in additive model, resp.). 23936824 2013
dbSNP: rs10489265
rs10489265
Entrez Id: 7292;100506023
Gene Symbol: TNFSF4;LOC100506023
TNFSF4;LOC100506023
CUI: C0024138
Disease:
Lupus Erythematosus, Discoid
0.010 GeneticVariation BEFREE The SNPs of TNFSF4 were associated with renal involvement in lupus patients from the Chinese population (P values for rs2205960 and rs10489265 were 0.014 and 0.005 in additive model, resp.). 23936824 2013
dbSNP: rs10489265
rs10489265
Entrez Id: 7292;100506023
Gene Symbol: TNFSF4;LOC100506023
TNFSF4;LOC100506023
CUI: C0014060
Disease:
Encephalitis, St. Louis
0.010 GeneticVariation BEFREE To replicate the association, two single-nucleotide polymorphisms (SNPs: rs2205960 and rs10489265) were genotyped in 814 SLE patients. 23936824 2013
dbSNP: rs1234313
rs1234313
Entrez Id: 7292
Gene Symbol: TNFSF4
TNFSF4
CUI: C0008312
Disease:
Primary biliary cirrhosis
0.010 GeneticVariation BEFREE In TNFSF4, T allele and TT genotype of rs2205960, and G allele of rs1234313, were associated with pSS (p<0.05); T allele of rs2205960 was correlated with PBC (p<0.05) as a risk factor. 23622253 2013
dbSNP: rs1234313
rs1234313
Entrez Id: 7292
Gene Symbol: TNFSF4
TNFSF4
CUI: C0151449
Disease:
Primary Sjögren's syndrome
0.010 GeneticVariation BEFREE In TNFSF4, T allele and TT genotype of rs2205960, and G allele of rs1234313, were associated with pSS (p<0.05); T allele of rs2205960 was correlated with PBC (p<0.05) as a risk factor. 23622253 2013
dbSNP: rs1234314
rs1234314
Entrez Id: 7292
Gene Symbol: TNFSF4
TNFSF4
CUI: C0024312
Disease:
Lymphopenia
0.010 GeneticVariation BEFREE Our research suggests association of rs2205960-T with SLE across multiple groups and an independent non-risk signal at rs1234314-C. rs2205960-T is associated with autoantibody production and lymphopenia. 23874208 2013
dbSNP: rs2205960
rs2205960
Entrez Id: 7292
Gene Symbol: TNFSF4
TNFSF4
CUI: C0151449
Disease:
Primary Sjögren's syndrome
0.010 GeneticVariation BEFREE In TNFSF4, T allele and TT genotype of rs2205960, and G allele of rs1234313, were associated with pSS (p<0.05); T allele of rs2205960 was correlated with PBC (p<0.05) as a risk factor. 23622253 2013
dbSNP: rs2205960
rs2205960
Entrez Id: 7292
Gene Symbol: TNFSF4
TNFSF4
CUI: C0024131
Disease:
Lupus Vulgaris
0.010 GeneticVariation BEFREE The SNPs of TNFSF4 were associated with renal involvement in lupus patients from the Chinese population (P values for rs2205960 and rs10489265 were 0.014 and 0.005 in additive model, resp.). 23936824 2013
dbSNP: rs2205960
rs2205960
Entrez Id: 7292
Gene Symbol: TNFSF4
TNFSF4
CUI: C0409974
Disease:
Lupus Erythematosus
0.010 GeneticVariation BEFREE The SNPs of TNFSF4 were associated with renal involvement in lupus patients from the Chinese population (P values for rs2205960 and rs10489265 were 0.014 and 0.005 in additive model, resp.). 23936824 2013
dbSNP: rs2205960
rs2205960
Entrez Id: 7292
Gene Symbol: TNFSF4
TNFSF4
CUI: C0024312
Disease:
Lymphopenia
0.010 GeneticVariation BEFREE Our research suggests association of rs2205960-T with SLE across multiple groups and an independent non-risk signal at rs1234314-C. rs2205960-T is associated with autoantibody production and lymphopenia. 23874208 2013
dbSNP: rs2205960
rs2205960
Entrez Id: 7292
Gene Symbol: TNFSF4
TNFSF4
CUI: C0008312
Disease:
Primary biliary cirrhosis
0.010 GeneticVariation BEFREE In TNFSF4, T allele and TT genotype of rs2205960, and G allele of rs1234313, were associated with pSS (p<0.05); T allele of rs2205960 was correlated with PBC (p<0.05) as a risk factor. 23622253 2013
dbSNP: rs2205960
rs2205960
Entrez Id: 7292
Gene Symbol: TNFSF4
TNFSF4
CUI: C0024138
Disease:
Lupus Erythematosus, Discoid
0.010 GeneticVariation BEFREE The SNPs of TNFSF4 were associated with renal involvement in lupus patients from the Chinese population (P values for rs2205960 and rs10489265 were 0.014 and 0.005 in additive model, resp.). 23936824 2013
dbSNP: rs3850641
rs3850641
Entrez Id: 7292
Gene Symbol: TNFSF4
TNFSF4
CUI: C0007785
Disease:
Cerebral Infarction
0.010 GeneticVariation BEFREE However, there was no significant association between rs3850641 and CI (Odds ration = 1.288, 95 % confidence interval = 0.993-1.670, P = 0.056). 23184501 2013
dbSNP: rs3850641
rs3850641
Entrez Id: 7292
Gene Symbol: TNFSF4
TNFSF4
CUI: C0023817
Disease:
Hyperlipoproteinemia Type I
0.010 GeneticVariation BEFREE These results suggest that the rs3850641 and rs17568 polymorphisms in the OX40L and OX40 genes are associated with some of the lipid and lipoprotein variations in subjects with endogenous HTG and/or in the general population of Han Chinese. 23216302 2013
dbSNP: rs3850641
rs3850641
Entrez Id: 7292
Gene Symbol: TNFSF4
TNFSF4
CUI: C0004153
Disease:
Atherosclerosis
0.010 GeneticVariation BEFREE TNFSF4 gene polymorphism rs3861950, but not rs3850641, is associated with the risk of atherosclerosis CI in a Chinese population. 23184501 2013
dbSNP: rs3850641
rs3850641
Entrez Id: 7292
Gene Symbol: TNFSF4
TNFSF4
CUI: C0003850
Disease:
Arteriosclerosis
0.010 GeneticVariation BEFREE TNFSF4 gene polymorphism rs3861950, but not rs3850641, is associated with the risk of atherosclerosis CI in a Chinese population. 23184501 2013
dbSNP: rs3861950
rs3861950
Entrez Id: 7292
Gene Symbol: TNFSF4
TNFSF4
CUI: C0948008
Disease:
Ischemic stroke
0.010 GeneticVariation BEFREE Genotypic association analysis demonstrated that the CC genotype of rs3861950 confers susceptibility to CI (Odds ration = 2.896, 95 % confidence interval = 1.368-6.132), and it was associated with a significantly higher risk of ischemic stroke (Odds ration = 3.520, 95 % confidence interval = 1.546-8.015, P = 0.003) after adjusting for the other confirmed risk factors such as the history of hypertension, diabetes, CAD, smoking and alcohol drinking. 23184501 2013
dbSNP: rs3861950
rs3861950
Entrez Id: 7292
Gene Symbol: TNFSF4
TNFSF4
CUI: C0011847
Disease:
Diabetes
0.010 GeneticVariation BEFREE Genotypic association analysis demonstrated that the CC genotype of rs3861950 confers susceptibility to CI (Odds ration = 2.896, 95 % confidence interval = 1.368-6.132), and it was associated with a significantly higher risk of ischemic stroke (Odds ration = 3.520, 95 % confidence interval = 1.546-8.015, P = 0.003) after adjusting for the other confirmed risk factors such as the history of hypertension, diabetes, CAD, smoking and alcohol drinking. 23184501 2013
dbSNP: rs3861950
rs3861950
Entrez Id: 7292
Gene Symbol: TNFSF4
TNFSF4
CUI: C0003850
Disease:
Arteriosclerosis
0.010 GeneticVariation BEFREE TNFSF4 gene polymorphism rs3861950, but not rs3850641, is associated with the risk of atherosclerosis CI in a Chinese population. 23184501 2013
dbSNP: rs3861950
rs3861950
Entrez Id: 7292
Gene Symbol: TNFSF4
TNFSF4
CUI: C0004153
Disease:
Atherosclerosis
0.010 GeneticVariation BEFREE TNFSF4 gene polymorphism rs3861950, but not rs3850641, is associated with the risk of atherosclerosis CI in a Chinese population. 23184501 2013
dbSNP: rs3861950
rs3861950
Entrez Id: 7292
Gene Symbol: TNFSF4
TNFSF4
CUI: C0011849
Disease:
Diabetes Mellitus
0.010 GeneticVariation BEFREE Genotypic association analysis demonstrated that the CC genotype of rs3861950 confers susceptibility to CI (Odds ration = 2.896, 95 % confidence interval = 1.368-6.132), and it was associated with a significantly higher risk of ischemic stroke (Odds ration = 3.520, 95 % confidence interval = 1.546-8.015, P = 0.003) after adjusting for the other confirmed risk factors such as the history of hypertension, diabetes, CAD, smoking and alcohol drinking. 23184501 2013
dbSNP: rs3861950
rs3861950
Entrez Id: 7292
Gene Symbol: TNFSF4
TNFSF4
CUI: C0020538
Disease:
Hypertensive disease
0.010 GeneticVariation BEFREE Genotypic association analysis demonstrated that the CC genotype of rs3861950 confers susceptibility to CI (Odds ration = 2.896, 95 % confidence interval = 1.368-6.132), and it was associated with a significantly higher risk of ischemic stroke (Odds ration = 3.520, 95 % confidence interval = 1.546-8.015, P = 0.003) after adjusting for the other confirmed risk factors such as the history of hypertension, diabetes, CAD, smoking and alcohol drinking. 23184501 2013