CXCR4, C-X-C motif chemokine receptor 4, 7852

N. diseases: 739; N. variants: 23
Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs104893624
rs104893624
Entrez Id: 7852;112268426
Gene Symbol: CXCR4;LOC112268426
CXCR4;LOC112268426
CUI: C0472817
Disease:
WHIM syndrome
0.750 GeneticVariation BEFREE To characterize novel genetic causes of the syndrome, we recruited a pediatric patient with possible WHIM syndrome, performed CXCR4 gene sequencing and compared his clinical phenotype and CXCR4 tail amino acid sequences with other patients with WHIM syndrome carrying CXCR4 (R334X) mutations. 27059040 2016
dbSNP: rs104893624
rs104893624
Entrez Id: 7852;112268426
Gene Symbol: CXCR4;LOC112268426
CXCR4;LOC112268426
CUI: C0472817
Disease:
WHIM syndrome
0.750 GeneticVariation BEFREE Deletion of the 238-246 motif accelerated CXCL12-induced wild-type (WT) receptor endocytosis but enabled CXCL12-mediated endocytosis and normalized signaling by the WHIM-associated receptor CXCR4(R334X). 25355818 2015
dbSNP: rs104893624
rs104893624
Entrez Id: 7852;112268426
Gene Symbol: CXCR4;LOC112268426
CXCR4;LOC112268426
CUI: C0472817
Disease:
WHIM syndrome
A 0.750 CausalMutation CLINVAR Chromothriptic cure of WHIM syndrome. 25662009 2015
dbSNP: rs104893624
rs104893624
Entrez Id: 7852;112268426
Gene Symbol: CXCR4;LOC112268426
CXCR4;LOC112268426
CUI: C0472817
Disease:
WHIM syndrome
A 0.750 CausalMutation CLINVAR The CXCR4 mutations in WHIM syndrome impair the stability of the T-cell immunologic synapse. 23794067 2013
dbSNP: rs104893624
rs104893624
Entrez Id: 7852;112268426
Gene Symbol: CXCR4;LOC112268426
CXCR4;LOC112268426
CUI: C0472817
Disease:
WHIM syndrome
0.750 GeneticVariation BEFREE Accordingly, like CXCR4(R334X), the most common truncation mutation in WHIM syndrome, CXCR4(E343K) mediated approximately 2-fold increased signaling in calcium flux and chemotaxis assays relative to wild-type CXCR4; however, CXCR4(E343K) had a reduced effect on blocking normal receptor down-regulation from the cell surface. 22596258 2012
dbSNP: rs104893624
rs104893624
Entrez Id: 7852;112268426
Gene Symbol: CXCR4;LOC112268426
CXCR4;LOC112268426
CUI: C0472817
Disease:
WHIM syndrome
0.750 GeneticVariation BEFREE Together, our data provide further evidence that CXCR4(R334X) is a gain-of-function mutation, and support clinical evaluation of AMD3100 as mechanism-based treatment in patients with WHIM syndrome. 21070597 2011
dbSNP: rs104893624
rs104893624
Entrez Id: 7852;112268426
Gene Symbol: CXCR4;LOC112268426
CXCR4;LOC112268426
CUI: C0472817
Disease:
WHIM syndrome
0.750 GeneticVariation BEFREE A nonsense mutation (C-->T) truncating the CXC chemokine receptor 4 (CXCR4) C-terminal cytoplasmic tail domain occurred at nucleotide position 1000(R334X) of the CXCR4 gene in one allele of the patient was identified, and the person was diagnosed as having WHIM syndrome. 19476565 2009
dbSNP: rs104893624
rs104893624
Entrez Id: 7852;112268426
Gene Symbol: CXCR4;LOC112268426
CXCR4;LOC112268426
CUI: C0472817
Disease:
WHIM syndrome
A 0.750 CausalMutation CLINVAR Impaired recruitment of Grk6 and beta-Arrestin 2 causes delayed internalization and desensitization of a WHIM syndrome-associated CXCR4 mutant receptor. 19956569 2009
dbSNP: rs104893624
rs104893624
Entrez Id: 7852;112268426
Gene Symbol: CXCR4;LOC112268426
CXCR4;LOC112268426
CUI: C0472817
Disease:
WHIM syndrome
A 0.750 CausalMutation CLINVAR Mutations in the chemokine receptor gene CXCR4 are associated with WHIM syndrome, a combined immunodeficiency disease. 12692554 2003
dbSNP: rs104893626
rs104893626
Entrez Id: 7852;112268426
Gene Symbol: CXCR4;LOC112268426
CXCR4;LOC112268426
CUI: C0472817
Disease:
WHIM syndrome
0.720 GeneticVariation BEFREE We engineered WM cells to express the most common WHIM (Warts, Hypogammaglobulinemia, Infections and Myelokathexis), CXCR(S338X) mutation in WM. 24912431 2015
dbSNP: rs104893626
rs104893626
Entrez Id: 7852;112268426
Gene Symbol: CXCR4;LOC112268426
CXCR4;LOC112268426
CUI: C0472817
Disease:
WHIM syndrome
0.720 GeneticVariation BEFREE We screened 418 patients with B-cell lymphoproliferative disorders and described the presence of the C1013G/CXCR4 warts, hypogammaglobulinemia, infections, and myelokathexis-associated mutation in 28.2% (37/131) of patients with lymphoplasmacytic lymphoma (Waldenström macroglobulinemia [WM]), being either absent or present in only 7% of other B-cell lymphomas. 24711662 2014
dbSNP: rs104893626
rs104893626
Entrez Id: 7852;112268426
Gene Symbol: CXCR4;LOC112268426
CXCR4;LOC112268426
CUI: C0472817
Disease:
WHIM syndrome
C 0.720 CausalMutation CLINVAR
dbSNP: rs104893624
rs104893624
Entrez Id: 7852;112268426
Gene Symbol: CXCR4;LOC112268426
CXCR4;LOC112268426
CUI: C1834176
Disease:
MYELOKATHEXIS, ISOLATED
A 0.700 CausalMutation CLINVAR
dbSNP: rs104893625
rs104893625
Entrez Id: 7852;112268426
Gene Symbol: CXCR4;LOC112268426
CXCR4;LOC112268426
CUI: C0472817
Disease:
WHIM syndrome
A 0.700 CausalMutation CLINVAR
dbSNP: rs1240625960
rs1240625960
Entrez Id: 7852;112268426
Gene Symbol: CXCR4;LOC112268426
CXCR4;LOC112268426
CUI: C0472817
Disease:
WHIM syndrome
A 0.700 GeneticVariation CLINVAR
dbSNP: rs730880320
rs730880320
Entrez Id: 7852;112268426
Gene Symbol: CXCR4;LOC112268426
CXCR4;LOC112268426
CUI: C0472817
Disease:
WHIM syndrome
C 0.700 CausalMutation CLINVAR
dbSNP: rs767830104
rs767830104
Entrez Id: 7852
Gene Symbol: CXCR4
CXCR4
CUI: C1956346
Disease:
Coronary Artery Disease
0.050 GeneticVariation BEFREE Association of V249I and T280M polymorphisms in the chemokine receptor CX3CR1 gene with early onset of coronary artery disease among North Indians. 22731642 2012
dbSNP: rs767830104
rs767830104
Entrez Id: 7852
Gene Symbol: CXCR4
CXCR4
CUI: C1956346
Disease:
Coronary Artery Disease
0.050 GeneticVariation BEFREE Adjusted for classical risk factors (age, sex, hypertension, dyslipidemia, diabetes mellitus and smoking), the odds ratio (OR) of V249I for CAD was 0.95 (95% confidence interval (CI)=0.78-1.15, p=0.61). 19628406 2009
dbSNP: rs767830104
rs767830104
Entrez Id: 7852
Gene Symbol: CXCR4
CXCR4
CUI: C1956346
Disease:
Coronary Artery Disease
0.050 GeneticVariation BEFREE We examined the frequencies of V249I and T280M among early-onset CAD patients (G1; n = 149; <50 years), late-onset CAD patients (G2; n = 150; >65 years) and healthy controls (HC; n = 149, 47-93 years) without known CAD risk factors. 18609106 2008
dbSNP: rs767830104
rs767830104
Entrez Id: 7852
Gene Symbol: CXCR4
CXCR4
CUI: C1956346
Disease:
Coronary Artery Disease
0.050 GeneticVariation BEFREE We investigated the effect of 5 common variations of chemokine and chemokine receptor genes (SDF1-3'A, CCR5-delta32, CCR2-64I, CX3CR1-V249I and CX3CR1-T280M) on predisposition to CAD. 16480760 2007
dbSNP: rs767830104
rs767830104
Entrez Id: 7852
Gene Symbol: CXCR4
CXCR4
CUI: C1956346
Disease:
Coronary Artery Disease
0.050 GeneticVariation BEFREE Genotyping of the CX3CR1-V249I polymorphism was performed in a cohort of 339 white individuals who underwent cardiac catheterization (n=197 with and n=142 without CAD, respectively). 11532900 2001
dbSNP: rs104893626
rs104893626
Entrez Id: 7852;112268426
Gene Symbol: CXCR4;LOC112268426
CXCR4;LOC112268426
CUI: C0024419
Disease:
Waldenstrom Macroglobulinemia
0.030 GeneticVariation BEFREE The AS-PCR assays detected CXCR4(S338X) mutations in WM and IgM monoclonal gammopathy of unknown significance (MGUS) patients not revealed by Sanger sequencing. 26659815 2016
dbSNP: rs104893626
rs104893626
Entrez Id: 7852;112268426
Gene Symbol: CXCR4;LOC112268426
CXCR4;LOC112268426
CUI: C0024419
Disease:
Waldenstrom Macroglobulinemia
0.030 GeneticVariation BEFREE Last, CXCR4(S338X) WM cells showed varying levels of resistance to other WM relevant therapeutics, including bendamustine, fludarabine, bortezomib and idelalisib in the presence of SDF-1a. 24912431 2015
dbSNP: rs371074389
rs371074389
Entrez Id: 7852;112268426
Gene Symbol: CXCR4;LOC112268426
CXCR4;LOC112268426
CUI: C0027651
Disease:
Neoplasms
0.030 GeneticVariation BEFREE Previous studies have demonstrated that the CXCL12 G801A polymorphism is closely correlated with tumor susceptibility. 26782381 2015
dbSNP: rs766914563
rs766914563
Entrez Id: 7852;112268426
Gene Symbol: CXCR4;LOC112268426
CXCR4;LOC112268426
CUI: C0027651
Disease:
Neoplasms
0.030 GeneticVariation BEFREE Previous studies have demonstrated that the CXCL12 G801A polymorphism is closely correlated with tumor susceptibility. 26782381 2015