Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs397514705
rs397514705
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
CUI: C1853490
Disease:
22q13.3 Deletion Syndrome
0.800 GeneticVariation UNIPROT SHANK3 and IGF1 restore synaptic deficits in neurons from 22q13 deletion syndrome patients. 24132240 2013
dbSNP: rs397514705
rs397514705
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
CUI: C1853490
Disease:
22q13.3 Deletion Syndrome
0.800 GeneticVariation UNIPROT Prevalence of SHANK3 variants in patients with different subtypes of autism spectrum disorders. 22892527 2013
dbSNP: rs397514705
rs397514705
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
CUI: C1853490
Disease:
22q13.3 Deletion Syndrome
G 0.800 CausalMutation CLINVAR
dbSNP: rs397514705
rs397514705
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
CUI: C1853490
Disease:
22q13.3 Deletion Syndrome
0.800 GeneticVariation UNIPROT Prospective investigation of autism and genotype-phenotype correlations in 22q13 deletion syndrome and SHANK3 deficiency. 23758760 2013
dbSNP: rs1057519395
rs1057519395
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
CUI: C1853490
Disease:
22q13.3 Deletion Syndrome
A 0.700 CausalMutation CLINVAR
dbSNP: rs1057519406
rs1057519406
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
CUI: C1853490
Disease:
22q13.3 Deletion Syndrome
T 0.700 GeneticVariation CLINVAR
dbSNP: rs1396379503
rs1396379503
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
CUI: C1853490
Disease:
22q13.3 Deletion Syndrome
A 0.700 CausalMutation CLINVAR
dbSNP: rs1555910143
rs1555910143
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
CUI: C1853490
Disease:
22q13.3 Deletion Syndrome
C 0.700 GeneticVariation CLINVAR
dbSNP: rs1555910162
rs1555910162
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
CUI: C1853490
Disease:
22q13.3 Deletion Syndrome
GC 0.700 CausalMutation CLINVAR
dbSNP: rs1555910212
rs1555910212
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
CUI: C1853490
Disease:
22q13.3 Deletion Syndrome
T 0.700 CausalMutation CLINVAR
dbSNP: rs1569115756
rs1569115756
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
CUI: C1853490
Disease:
22q13.3 Deletion Syndrome
T 0.700 CausalMutation CLINVAR
dbSNP: rs762292772
rs762292772
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
CUI: C1853490
Disease:
22q13.3 Deletion Syndrome
T 0.700 CausalMutation CLINVAR
dbSNP: rs762292772
rs762292772
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
CUI: C1853490
Disease:
22q13.3 Deletion Syndrome
TG 0.700 CausalMutation CLINVAR
dbSNP: rs762292772
rs762292772
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
CUI: C1862389
Disease:
ATRIAL SEPTAL DEFECT 1
TG 0.700 CausalMutation CLINVAR Enhanced utility of family-centered diagnostic exome sequencing with inheritance model-based analysis: results from 500 unselected families with undiagnosed genetic conditions. 25356970 2015
dbSNP: rs762292772
rs762292772
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
CUI: C0018817
Disease:
Atrial Septal Defects
TG 0.700 CausalMutation CLINVAR Enhanced utility of family-centered diagnostic exome sequencing with inheritance model-based analysis: results from 500 unselected families with undiagnosed genetic conditions. 25356970 2015
dbSNP: rs1555910143
rs1555910143
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
CUI: C1510586
Disease:
Autism Spectrum Disorders
C 0.700 CausalMutation CLINVAR Targeted resequencing of 358 candidate genes for autism spectrum disorder in a Chinese cohort reveals diagnostic potential and genotype-phenotype correlations. 30763456 2019
dbSNP: rs762292772
rs762292772
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
CUI: C1510586
Disease:
Autism Spectrum Disorders
TG 0.700 CausalMutation CLINVAR Enhanced utility of family-centered diagnostic exome sequencing with inheritance model-based analysis: results from 500 unselected families with undiagnosed genetic conditions. 25356970 2015
dbSNP: rs762292772
rs762292772
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
CUI: C1510586
Disease:
Autism Spectrum Disorders
TG 0.700 CausalMutation CLINVAR Targeted resequencing of 358 candidate genes for autism spectrum disorder in a Chinese cohort reveals diagnostic potential and genotype-phenotype correlations. 30763456 2019
dbSNP: rs1336089966
rs1336089966
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
CUI: C1510586
Disease:
Autism Spectrum Disorders
0.010 GeneticVariation BEFREE Here, we report the functional effects of two de novo mutations (STOP and Q321R) and two inherited variations (R12C and R300C) identified in patients with ASD. 21606927 2012
dbSNP: rs376862893
rs376862893
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
CUI: C1510586
Disease:
Autism Spectrum Disorders
0.010 GeneticVariation BEFREE Here, we report the functional effects of two de novo mutations (STOP and Q321R) and two inherited variations (R12C and R300C) identified in patients with ASD. 21606927 2012
dbSNP: rs6010065
rs6010065
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
CUI: C1510586
Disease:
Autism Spectrum Disorders
0.010 GeneticVariation BEFREE Genotyping in a clinical cohort within one of these promoters (<i>SHANK3</i> promoter 6) revealed that the SNP rs6010065 was associated with ASD. 29339533 2018
dbSNP: rs76224556
rs76224556
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
CUI: C1510586
Disease:
Autism Spectrum Disorders
0.010 GeneticVariation BEFREE While SHANK3 variants are present in any ASD subtype, the SNP rs76224556 appears to be significantly associated with PDD-NOS cases. 22892527 2013
dbSNP: rs767058690
rs767058690
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
CUI: C1510586
Disease:
Autism Spectrum Disorders
0.010 GeneticVariation BEFREE The p.G1011V variant was the most interesting variant in our study; together with previous studies this variant has been identified in 4 out of 1,524 SCZ patients and in 4 out of 2,147 individuals with autism spectrum disorder (ASD), but not in 2468 European Sanger-sequenced controls. 28371232 2017
dbSNP: rs9616915
rs9616915
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
CUI: C1510586
Disease:
Autism Spectrum Disorders
0.010 GeneticVariation BEFREE Genetic analysis of heterozygous model, dominant model and additive model showed an association of the C allele of the rs9616915 with ASD (e.g., additive model, OR 0.582, 95% CI 0.359-0.942, P = 0.028). 24398551 2014
dbSNP: rs75347843
rs75347843
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
CUI: C0337428
Disease:
Fibrinogen assay
0.700 GeneticVariation GWASCAT Comparison of HapMap and 1000 Genomes Reference Panels in a Large-Scale Genome-Wide Association Study. 28107422 2017