Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs13059232
rs13059232
Entrez Id: 8856
Gene Symbol: NR1I2
NR1I2
CUI: C0948008
Disease:
Ischemic stroke
0.010 GeneticVariation BEFREE Our results suggest that NR1I2 variant (rs13059232) could serve as biomarker for clopidogrel therapy and individualized antiplatelet medications in the treatment of acute IS patients. 30487649 2019
dbSNP: rs3814057
rs3814057
Entrez Id: 8856
Gene Symbol: NR1I2
NR1I2
CUI: C1306459
Disease:
Primary malignant neoplasm
0.010 GeneticVariation BEFREE The findings demonstrated that rs3814058 polymorphism (CT compared with CC: pooled OR = 1.280, <i>P</i>=6.36E-05; TT compared with CC: pooled OR = 1.663, <i>P</i>=2.40E-04; dominant model: pooled OR = 1.382, <i>P</i>=2.58E-08; recessive model: pooled OR = 1.422, <i>P</i>=0.002; T compared with C: pooled OR = 1.292, <i>P</i>=6.35E-05) and rs3814057 polymorphism (AC compared with AA: pooled OR = 1.170, <i>P</i>=0.036; dominant model: pooled OR = 1.162, <i>P</i>=0.037) were associated with the risk of overall cancer. 29654162 2018
dbSNP: rs3814057
rs3814057
Entrez Id: 8856
Gene Symbol: NR1I2
NR1I2
CUI: C0006826
Disease:
Malignant Neoplasms
0.010 GeneticVariation BEFREE The findings demonstrated that rs3814058 polymorphism (CT compared with CC: pooled OR = 1.280, <i>P</i>=6.36E-05; TT compared with CC: pooled OR = 1.663, <i>P</i>=2.40E-04; dominant model: pooled OR = 1.382, <i>P</i>=2.58E-08; recessive model: pooled OR = 1.422, <i>P</i>=0.002; T compared with C: pooled OR = 1.292, <i>P</i>=6.35E-05) and rs3814057 polymorphism (AC compared with AA: pooled OR = 1.170, <i>P</i>=0.036; dominant model: pooled OR = 1.162, <i>P</i>=0.037) were associated with the risk of overall cancer. 29654162 2018
dbSNP: rs3814058
rs3814058
Entrez Id: 8856
Gene Symbol: NR1I2
NR1I2
CUI: C1306459
Disease:
Primary malignant neoplasm
0.010 GeneticVariation BEFREE In stratified analyses, rs3814058</span> polymorphism was revealed to increase the cancer risk in lung cancer subgroup. 29654162 2018
dbSNP: rs3814058
rs3814058
Entrez Id: 8856
Gene Symbol: NR1I2
NR1I2
CUI: C0006826
Disease:
Malignant Neoplasms
0.010 GeneticVariation BEFREE In stratified analyses, rs3814058</span> polymorphism was revealed to increase the cancer risk in lung cancer subgroup. 29654162 2018
dbSNP: rs2276707
rs2276707
Entrez Id: 8856
Gene Symbol: NR1I2
NR1I2
CUI: C0021390
Disease:
Inflammatory Bowel Diseases
0.010 GeneticVariation BEFREE Our analyses of rs1523127, rs2276707, and rs6785049 suggested that PXR gene polymorphism had no obvious influence on the risk of IBD in Caucasians. 28742404 2017
dbSNP: rs3842689
rs3842689
Entrez Id: 8856
Gene Symbol: NR1I2
NR1I2
CUI: C1704321
Disease:
Nephrotic Syndrome, Minimal Change
0.010 GeneticVariation BEFREE SXR rs3842689: a prognostic factor for steroid sensitivity or resistance in pediatric idiopathic nephrotic syndrome. 27377607 2016
dbSNP: rs3842689
rs3842689
Entrez Id: 8856
Gene Symbol: NR1I2
NR1I2
CUI: C3496337
Disease:
Idiopathic Nephrotic Syndrome
0.010 GeneticVariation BEFREE SXR rs3842689: a prognostic factor for steroid sensitivity or resistance in pediatric idiopathic nephrotic syndrome. 27377607 2016
dbSNP: rs1523127
rs1523127
Entrez Id: 8856
Gene Symbol: NR1I2
NR1I2
CUI: C0040034
Disease:
Thrombocytopenia
0.010 GeneticVariation BEFREE Carriers of two copies of the ATG haplotypes of NR1I2-rs1523130, rs3814055 and rs1523127 were 19% less sensitive to thrombocytopenia than those harboring other haplotypes (p = 0.025). 26267044 2015
dbSNP: rs1523130
rs1523130
Entrez Id: 8856
Gene Symbol: NR1I2
NR1I2
CUI: C0040034
Disease:
Thrombocytopenia
0.010 GeneticVariation BEFREE Carriers of two copies of the ATG haplotypes of NR1I2-rs1523130, rs3814055 and rs1523127 were 19% less sensitive to thrombocytopenia than those harboring other haplotypes (p = 0.025). 26267044 2015
dbSNP: rs3814055
rs3814055
Entrez Id: 8856
Gene Symbol: NR1I2
NR1I2
CUI: C0040034
Disease:
Thrombocytopenia
0.010 GeneticVariation BEFREE Carriers of two copies of the ATG haplotypes of NR1I2-rs1523130, rs3814055 and rs1523127 were 19% less sensitive to thrombocytopenia than those harboring other haplotypes (p = 0.025). 26267044 2015
dbSNP: rs3814058
rs3814058
Entrez Id: 8856
Gene Symbol: NR1I2
NR1I2
CUI: C0009402
Disease:
Colorectal Carcinoma
0.010 GeneticVariation BEFREE Our data suggest that the functional polymorphism rs3814058C>T in 3'-UTR of PXR may be a functional biomarker to predict risk of CRC. 26547791 2015
dbSNP: rs2472677
rs2472677
Entrez Id: 8856
Gene Symbol: NR1I2
NR1I2
CUI: C0600139
Disease:
Prostate carcinoma
0.010 GeneticVariation BEFREE To evaluate whether PXR-HNF3β/T (rs2472677), PXR-HNF4/G (rs7643645), and CYP3A4*1B (rs2740574) polymorphisms are associated with PCa a case control-study was performed. 24924803 2014
dbSNP: rs2472677
rs2472677
Entrez Id: 8856
Gene Symbol: NR1I2
NR1I2
CUI: C0376358
Disease:
Malignant neoplasm of prostate
0.010 GeneticVariation BEFREE To evaluate whether PXR-HNF3β/T (rs2472677), PXR-HNF4/G (rs7643645), and CYP3A4*1B (rs2740574) polymorphisms are associated with PCa a case control-study was performed. 24924803 2014
dbSNP: rs7643645
rs7643645
Entrez Id: 8856
Gene Symbol: NR1I2
NR1I2
CUI: C0376358
Disease:
Malignant neoplasm of prostate
0.010 GeneticVariation BEFREE To evaluate whether PXR-HNF3β/T (rs2472677), PXR-HNF4/G (rs7643645), and CYP3A4*1B (rs2740574) polymorphisms are associated with PCa a case control-study was performed. 24924803 2014
dbSNP: rs7643645
rs7643645
Entrez Id: 8856
Gene Symbol: NR1I2
NR1I2
CUI: C0600139
Disease:
Prostate carcinoma
0.010 GeneticVariation BEFREE To evaluate whether PXR-HNF3β/T (rs2472677), PXR-HNF4/G (rs7643645), and CYP3A4*1B (rs2740574) polymorphisms are associated with PCa a case control-study was performed. 24924803 2014
dbSNP: rs1478478283
rs1478478283
Entrez Id: 8856
Gene Symbol: NR1I2
NR1I2
CUI: C0678222
Disease:
Breast Carcinoma
0.010 GeneticVariation BEFREE The aim of the present study was to search for an association of the protease activated receptor (PAR)1 gene -506 insertion/deletion (I/D), factor V Leiden (FVL), prothrombin (PT) G20210A, and methylenetetrahydrofolate reductase (MTHFR) C677T polymorphisms with disease-free survival (DFS) in breast cancer. 21822552 2012
dbSNP: rs1478478283
rs1478478283
Entrez Id: 8856
Gene Symbol: NR1I2
NR1I2
CUI: C0006142
Disease:
Malignant neoplasm of breast
0.010 GeneticVariation BEFREE The aim of the present study was to search for an association of the protease activated receptor (PAR)1 gene -506 insertion/deletion (I/D), factor V Leiden (FVL), prothrombin (PT) G20210A, and methylenetetrahydrofolate reductase (MTHFR) C677T polymorphisms with disease-free survival (DFS) in breast cancer. 21822552 2012
dbSNP: rs1523128
rs1523128
Entrez Id: 8856
Gene Symbol: NR1I2
NR1I2
CUI: C0031099
Disease:
Periodontitis
0.010 GeneticVariation BEFREE For one haplotype (GTGAG) composed of rs12721602, rs3814055, rs1523128, rs12721607 and rs6785049, a significant association with periodontitis was found [p-value after permutation with 100,000 iterations (p(permut.)) 21954916 2012
dbSNP: rs2472680
rs2472680
Entrez Id: 8856
Gene Symbol: NR1I2
NR1I2
CUI: C0848558
Disease:
Hypospadias
0.010 GeneticVariation BEFREE In the ITA study group, two SNPs in AHR (rs3757824) and ARNT2 (rs1020397) were significantly associated with risk of CO. Interaction analysis of the positive SNPs using multifactor dimensionality reduction demonstrated that synergistic interaction between rs2472680, rs4919686 and rs5000770 had 62.81% prediction accuracy for CO (P=0.011) and that between rs2069521 and rs2278705 had 69.98% prediction accuracy for HS (P=0.001) in JPN population. 22648180 2012
dbSNP: rs2472680
rs2472680
Entrez Id: 8856
Gene Symbol: NR1I2
NR1I2
CUI: C0010417
Disease:
Cryptorchidism
0.010 GeneticVariation BEFREE In the ITA study group, two SNPs in AHR (rs3757824) and ARNT2 (rs1020397) were significantly associated with risk of CO. Interaction analysis of the positive SNPs using multifactor dimensionality reduction demonstrated that synergistic interaction between rs2472680, rs4919686 and rs5000770 had 62.81% prediction accuracy for CO (P=0.011) and that between rs2069521 and rs2278705 had 69.98% prediction accuracy for HS (P=0.001) in JPN population. 22648180 2012
dbSNP: rs2472680
rs2472680
Entrez Id: 8856
Gene Symbol: NR1I2
NR1I2
CUI: C1691215
Disease:
Penile hypospadias
0.010 GeneticVariation BEFREE In the ITA study group, two SNPs in AHR (rs3757824) and ARNT2 (rs1020397) were significantly associated with risk of CO. Interaction analysis of the positive SNPs using multifactor dimensionality reduction demonstrated that synergistic interaction between rs2472680, rs4919686 and rs5000770 had 62.81% prediction accuracy for CO (P=0.011) and that between rs2069521 and rs2278705 had 69.98% prediction accuracy for HS (P=0.001) in JPN population. 22648180 2012
dbSNP: rs6785049
rs6785049
Entrez Id: 8856
Gene Symbol: NR1I2
NR1I2
CUI: C0031099
Disease:
Periodontitis
0.010 GeneticVariation BEFREE For one haplotype (GTGAG) composed of rs12721602, rs3814055, rs1523128, rs12721607 and rs6785049, a significant association with periodontitis was found [p-value after permutation with 100,000 iterations (p(permut.)) 21954916 2012
dbSNP: rs12721602
rs12721602
Entrez Id: 8856
Gene Symbol: NR1I2
NR1I2
CUI: C0010346
Disease:
Crohn Disease
0.010 GeneticVariation BEFREE In CD, the strongest disease association was found for a haplotype consisting of the SNPs rs12721602-rs3814055-rs1523128-rs1523127-rs12721607-rs6785049-rs2276707-rs3814057 (omnibus P-value: 6.50 × 10(-15)) which was found in two separate cohorts (cohort I = discovery cohort: CD: n = 492, controls: n = 793; P = 4.51 × 10(-17); Bonferroni corrected: P = 1.27 × 10(-15); cohort II = replication cohort: CD: n = 367, controls: n = 707; P = 7.12 × 10(-4); P(corr) = 1.99 × 10(-2)). 21830270 2011
dbSNP: rs12721602
rs12721602
Entrez Id: 8856
Gene Symbol: NR1I2
NR1I2
CUI: C0009324
Disease:
Ulcerative Colitis
0.010 GeneticVariation BEFREE Genomic DNA from 2823 individuals of Caucasian origin including 859 patients with Crohn's disease (CD), 464 patients with ulcerative colitis (UC), and 1500 healthy, unrelated controls was analyzed for eight PXR/NR1I2 single nucleotide polymorphisms (SNPs) (rs12721602 (-25564), rs3814055 (-25385), rs1523128 (-24756), rs1523127 (-24381), rs45610735 = p.Gly36Arg (+106), rs6785049 (+7635), rs2276707 (+8055), and rs3814057 (+11156)). 21830270 2011