Source: BEFREE

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs317250 1.000 2 76036546 intron variant C/T snv 0.96 1
rs2268626
IFT43 ; TGFB3
1.000 14 75978424 intron variant C/T snv 0.80 1
rs2252070
MMP13
0.752 0.320 11 102955810 upstream gene variant C/T snv 0.68 13
rs17563
BMP4
0.790 0.320 14 53950804 stop lost A/G snv 0.45 0.44 8
rs861019
IRF6
0.925 0.120 1 209802041 splice region variant A/G snv 0.44 2
rs2240308
AXIN2
0.701 0.360 17 65558473 missense variant G/A snv 0.47 0.39 18
rs8049367 0.851 0.240 16 3930444 downstream gene variant T/C snv 0.37 2
rs17576
MMP9
0.557 0.760 20 46011586 missense variant A/G snv 0.39 0.36 73
rs12532
MSX1
0.790 0.200 4 4863419 3 prime UTR variant A/G snv 0.36 10
rs4904210
PAX9
0.851 0.080 14 36666548 missense variant G/C snv 0.36 0.33 5
rs987525
CCDC26
0.807 0.160 8 128933908 intron variant C/A snv 0.31 6
rs8670
MSX1
0.925 0.080 4 4863149 3 prime UTR variant C/T snv 0.22 0.23 4
rs3178250
BMP2
0.827 0.080 20 6779554 3 prime UTR variant T/C snv 0.21 5
rs243865
MMP2
0.600 0.640 16 55477894 intron variant C/T snv 0.19 47
rs11806449
GREM2
1.000 1 240493497 intron variant G/A snv 0.21 0.17 1
rs11001553
PRKG1-AS1 ; DKK1
0.925 0.080 10 52313141 intron variant C/T snv 0.12 2
rs2235371
IRF6
0.752 0.360 1 209790735 missense variant C/T snv 8.7E-02 3.9E-02 11
rs61735045
COL5A1
0.882 0.160 9 134750808 missense variant G/A snv 3.5E-02 3.1E-02 2
rs114632254
EDARADD
1.000 1 236482309 missense variant C/T snv 2.1E-02 2.1E-02 1
rs1095
MSX1
0.925 0.080 4 4863211 3 prime UTR variant C/T snv 1.5E-02 2
rs121908120
WNT10A
0.701 0.280 2 218890289 missense variant T/A snv 1.4E-02 1.4E-02 4
rs121908119
WNT10A ; LOC107984111
0.763 0.200 2 218882368 stop gained C/A snv 6.2E-04 8.5E-04 5
rs7802
IRF6 ; C1orf74
1.000 1 209785814 3 prime UTR variant A/G snv 7.0E-04 1
rs147680216
WNT10A
0.742 0.160 2 218890244 missense variant G/A snv 2.1E-03 6.9E-04 9
rs994158401
MSX1
1.000 4 4860050 missense variant A/G snv 1.4E-03 1.7E-04 1