Source: BEFREE

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1801516
ATM
0.627 0.400 11 108304735 missense variant G/A snv 0.11 0.11 37
rs1051730
CHRNA3
0.641 0.600 15 78601997 synonymous variant G/A snv 0.27 0.26 37
rs1258159645
NQO1
0.630 0.600 16 69711128 missense variant G/A snv 7.0E-06 37
rs3218536
XRCC2
0.620 0.440 7 152648922 missense variant C/G;T snv 4.0E-06; 6.4E-02 37
rs401681
CLPTM1L
0.620 0.640 5 1321972 intron variant C/T snv 0.48 36
rs2282679
GC
0.645 0.480 4 71742666 intron variant T/G snv 0.21 36
rs1045485
CASP8
0.637 0.480 2 201284866 missense variant G/A;C;T snv 4.0E-06; 9.0E-02 34
rs10741657
CYP2R1
0.637 0.520 11 14893332 upstream gene variant A/G snv 0.65 32
rs4759314
HOTAIR
0.649 0.440 12 53968051 non coding transcript exon variant G/A snv 0.93 31
rs486907
RNASEL
0.667 0.360 1 182585422 missense variant C/T snv 0.31 0.28 31
rs11549467
HIF1A ; HIF1A-AS3
0.653 0.400 14 61740857 missense variant G/A snv 8.9E-03 7.0E-03 30
rs2308321
MGMT
0.653 0.480 10 129766800 missense variant A/G snv 9.3E-02 8.7E-02 29
rs780094
GCKR
0.658 0.400 2 27518370 intron variant T/C snv 0.67 27
rs1799939
RET
0.658 0.280 10 43114671 missense variant G/A;C;T snv 0.21 27
rs6214
LINC02456 ; HELLPAR ; IGF1
0.672 0.400 12 102399791 3 prime UTR variant C/T snv 0.45 25
rs34612342
MUTYH
0.653 0.400 1 45332803 missense variant T/C snv 1.5E-03 1.6E-03 24
rs1223231582
PRSS1
0.677 0.280 7 142750639 missense variant A/G snv 7.0E-06 24
rs1799895
SOD3
0.683 0.360 4 24800212 missense variant C/G snv 2.3E-02 1.2E-02 24
rs1800440
CYP1B1
0.653 0.440 2 38070996 missense variant T/C;G snv 0.15; 4.0E-06 23
rs895520
NPAS2
0.689 0.320 2 100961475 intron variant G/A snv 0.35 23
rs1801270
CDKN1A
0.689 0.400 6 36684194 missense variant C/A;T snv 0.15; 4.4E-05 22
rs2066827
GPR19 ; CDKN1B
0.695 0.320 12 12718165 missense variant T/A;C;G snv 1.6E-04; 1.6E-05; 0.26 21
rs5219
KCNJ11
0.701 0.360 11 17388025 stop gained T/A;C snv 0.64 21
rs1131691021
TP53
0.716 0.120 17 7675097 missense variant A/C;G snv 21
rs121912651
TP53
0.605 0.680 17 7674221 missense variant G/A;C snv 4.0E-06 21