Source: GWASDB

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs17195551
rs17195551
ATAT1
1.000 0.040 6 30633618 intron variant C/T snv 3.2E-02
CUI: C0042900
Disease: Vitiligo
Vitiligo 		0.700 1.000 1 2010 2010
dbSNP: rs1847134
rs1847134
TYR ; LOC107984363
0.925 0.080 11 89272085 intron variant A/C snv 0.26
CUI: C0042900
Disease: Vitiligo
Vitiligo 		0.700 1.000 1 2010 2010
dbSNP: rs2236313
rs2236313
RNASET2
1.000 0.040 6 166946901 intron variant T/C snv 0.53 0.50
CUI: C0042900
Disease: Vitiligo
Vitiligo 		0.800 1.000 1 2010 2010
dbSNP: rs2248902
rs2248902 		1.000 0.040 6 31266337 downstream gene variant G/A;T snv
CUI: C0042900
Disease: Vitiligo
Vitiligo 		0.700 1.000 1 2010 2010
dbSNP: rs2395185
rs2395185
HLA-DRB9
0.724 0.360 6 32465390 intron variant G/T snv 0.29
CUI: C0042900
Disease: Vitiligo
Vitiligo 		0.700 1.000 1 2010 2010
dbSNP: rs2516049
rs2516049
HLA-DRB1
0.742 0.400 6 32602623 intergenic variant T/C snv 0.27
CUI: C0042900
Disease: Vitiligo
Vitiligo 		0.700 1.000 1 2010 2010
dbSNP: rs2523505
rs2523505
DDX39B ; SNORD84 ; ATP6V1G2-DDX39B ; DDX39B-AS1
1.000 0.040 6 31542225 5 prime UTR variant C/G snv 7.6E-02
CUI: C0042900
Disease: Vitiligo
Vitiligo 		0.700 1.000 1 2010 2010
dbSNP: rs2524123
rs2524123
HLA-B ; LINC02571 ; LOC112267902
0.925 0.040 6 31297537 intron variant T/C snv 0.34
CUI: C0042900
Disease: Vitiligo
Vitiligo 		0.700 1.000 1 2010 2010
dbSNP: rs28383344
rs28383344
HLA-DQA1 ; LOC107986589
1.000 0.040 6 32637290 intron variant C/G;T snv
CUI: C0042900
Disease: Vitiligo
Vitiligo 		0.700 1.000 1 2010 2010
dbSNP: rs2858870
rs2858870
HLA-DRB1
0.851 0.280 6 32604474 intergenic variant T/A;C snv
CUI: C0042900
Disease: Vitiligo
Vitiligo 		0.700 1.000 1 2010 2010
dbSNP: rs3094061
rs3094061 		0.925 0.160 6 30353412 downstream gene variant A/C;T snv
CUI: C0042900
Disease: Vitiligo
Vitiligo 		0.700 1.000 1 2010 2010
dbSNP: rs3096697
rs3096697
PPT2 ; EGFL8 ; PPT2-EGFL8
0.882 0.200 6 32166733 missense variant G/A snv 0.16 0.18
CUI: C0042900
Disease: Vitiligo
Vitiligo 		0.700 1.000 1 2010 2010
dbSNP: rs3130284
rs3130284
AGPAT1
0.925 0.120 6 32172710 intron variant T/C snv 0.18
CUI: C0042900
Disease: Vitiligo
Vitiligo 		0.700 1.000 1 2010 2010
dbSNP: rs3130347
rs3130347
PPT2 ; EGFL8 ; PPT2-EGFL8
1.000 0.040 6 32166879 intron variant T/C snv 0.15 0.18
CUI: C0042900
Disease: Vitiligo
Vitiligo 		0.700 1.000 1 2010 2010
dbSNP: rs3130424
rs3130424 		0.925 0.040 6 31250462 intergenic variant A/C;G;T snv
CUI: C0042900
Disease: Vitiligo
Vitiligo 		0.700 1.000 1 2010 2010
dbSNP: rs3130455
rs3130455
TCF19 ; CCHCR1
1.000 0.040 6 31158201 5 prime UTR variant A/C;T snv
CUI: C0042900
Disease: Vitiligo
Vitiligo 		0.700 1.000 1 2010 2010
dbSNP: rs3130457
rs3130457
POU5F1 ; PSORS1C3
0.851 0.120 6 31179417 intron variant T/C snv 0.21
CUI: C0042900
Disease: Vitiligo
Vitiligo 		0.700 1.000 1 2010 2010
dbSNP: rs3130473
rs3130473 		0.882 0.160 6 31231431 intergenic variant C/T snv 0.23
CUI: C0042900
Disease: Vitiligo
Vitiligo 		0.700 1.000 1 2010 2010
dbSNP: rs3131296
rs3131296
NOTCH4
0.807 0.320 6 32205216 intron variant C/T snv 0.11
CUI: C0042900
Disease: Vitiligo
Vitiligo 		0.700 1.000 1 2010 2010
dbSNP: rs3132580
rs3132580
MUCL3 ; SFTA2 ; HCG21
0.790 0.360 6 30952347 missense variant G/A snv 8.0E-02 9.3E-02
CUI: C0042900
Disease: Vitiligo
Vitiligo 		0.700 1.000 1 2010 2010
dbSNP: rs3132649
rs3132649 		1.000 0.040 6 30353280 downstream gene variant G/A snv 0.11
CUI: C0042900
Disease: Vitiligo
Vitiligo 		0.700 1.000 1 2010 2010
dbSNP: rs3134942
rs3134942
NOTCH4
0.790 0.320 6 32200994 synonymous variant G/T snv 9.7E-02 0.11
CUI: C0042900
Disease: Vitiligo
Vitiligo 		0.700 1.000 1 2010 2010
dbSNP: rs3134945
rs3134945
RNF5 ; AGPAT1 ; MIR6833
0.827 0.240 6 32178715 intron variant C/A snv 0.18
CUI: C0042900
Disease: Vitiligo
Vitiligo 		0.700 1.000 1 2010 2010
dbSNP: rs3134947
rs3134947
RNF5 ; AGPAT1
0.925 0.120 6 32177428 intron variant C/T snv 0.18
CUI: C0042900
Disease: Vitiligo
Vitiligo 		0.700 1.000 1 2010 2010
dbSNP: rs3218822
rs3218822
GTF2H4 ; VARS2
1.000 0.040 6 30912559 intron variant T/C snv 1.9E-02
CUI: C0042900
Disease: Vitiligo
Vitiligo 		0.700 1.000 1 2010 2010