Source: BEFREE

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs2294008
rs2294008
PSCA ; JRK
0.672 0.320 8 142680513 5 prime UTR variant C/T snv 0.46 0.45
CUI: C0001418
Disease: Adenocarcinoma
Adenocarcinoma 		0.010 1.000 1 2017 2017
dbSNP: rs3784730
rs3784730
ST8SIA2
0.851 0.120 15 92443898 intron variant A/G snv 0.44
CUI: C0001418
Disease: Adenocarcinoma
Adenocarcinoma 		0.010 1.000 1 2016 2016
dbSNP: rs4680
rs4680
COMT ; MIR4761
0.442 0.920 22 19963748 missense variant G/A snv 0.46 0.44
CUI: C0001418
Disease: Adenocarcinoma
Adenocarcinoma 		0.010 1.000 1 2013 2013
dbSNP: rs9370729
rs9370729 		6 14138061 downstream gene variant C/T snv 0.44
CUI: C0001418
Disease: Adenocarcinoma
Adenocarcinoma 		0.010 1.000 1 2009 2009
dbSNP: rs1333049
rs1333049
CDKN2B-AS1
0.614 0.520 9 22125504 intron variant G/C snv 0.41
CUI: C0001418
Disease: Adenocarcinoma
Adenocarcinoma 		0.010 1.000 1 2016 2016
dbSNP: rs10505477
rs10505477
POU5F1B ; CASC8 ; PCAT1
0.658 0.400 8 127395198 intron variant A/G snv 0.40
CUI: C0001418
Disease: Adenocarcinoma
Adenocarcinoma 		0.010 1.000 1 2016 2016
dbSNP: rs3114020
rs3114020
ABCG2
0.882 0.200 4 88162514 intron variant T/C snv 0.40
CUI: C0001418
Disease: Adenocarcinoma
Adenocarcinoma 		0.010 1.000 1 2017 2017
dbSNP: rs2269577
rs2269577
XBP1 ; ZNRF3
0.882 0.120 22 28800769 non coding transcript exon variant G/C snv 0.40
CUI: C0001418
Disease: Adenocarcinoma
Adenocarcinoma 		0.010 1.000 1 2013 2013
dbSNP: rs11568820
rs11568820
VDR
0.672 0.480 12 47908762 intron variant C/T snv 0.38
CUI: C0001418
Disease: Adenocarcinoma
Adenocarcinoma 		0.010 1.000 1 2017 2017
dbSNP: rs10937405
rs10937405
TP63
0.807 0.080 3 189665394 intron variant C/T snv 0.38
CUI: C0001418
Disease: Adenocarcinoma
Adenocarcinoma 		0.010 1.000 1 2011 2011
dbSNP: rs402710
rs402710
CLPTM1L
0.716 0.320 5 1320607 non coding transcript exon variant C/T snv 0.33 0.38
CUI: C0001418
Disease: Adenocarcinoma
Adenocarcinoma 		0.010 1.000 1 2010 2010
dbSNP: rs6465657
rs6465657
LMTK2
0.807 0.280 7 98187015 intron variant C/T snv 0.41 0.37
CUI: C0001418
Disease: Adenocarcinoma
Adenocarcinoma 		0.010 1.000 1 2010 2010
dbSNP: rs3136038
rs3136038
ERCC4
0.763 0.200 16 13919522 upstream gene variant C/T snv 0.36
CUI: C0001418
Disease: Adenocarcinoma
Adenocarcinoma 		0.010 1.000 1 2008 2008
dbSNP: rs4396880
rs4396880
TP63
3 189638432 intron variant G/A snv 0.34
CUI: C0001418
Disease: Adenocarcinoma
Adenocarcinoma 		0.010 1.000 1 2011 2011
dbSNP: rs2168351
rs2168351
ST8SIA2
0.851 0.120 15 92440492 intron variant A/G snv 0.33
CUI: C0001418
Disease: Adenocarcinoma
Adenocarcinoma 		0.010 1.000 1 2016 2016
dbSNP: rs3765524
rs3765524
PLCE1
0.724 0.320 10 94298541 missense variant C/T snv 0.27 0.31
CUI: C0001418
Disease: Adenocarcinoma
Adenocarcinoma 		0.010 1.000 1 2019 2019
dbSNP: rs2274223
rs2274223
PLCE1
0.620 0.400 10 94306584 missense variant A/G snv 0.28 0.31
CUI: C0001418
Disease: Adenocarcinoma
Adenocarcinoma 		0.010 1.000 1 2012 2012
dbSNP: rs12541709
rs12541709
TNKS
1.000 0.080 8 9751081 intron variant C/G snv 0.29
CUI: C0001418
Disease: Adenocarcinoma
Adenocarcinoma 		0.010 1.000 1 2015 2015
dbSNP: rs2275913
rs2275913
IL17A
0.514 0.760 6 52186235 upstream gene variant G/A snv 0.28
CUI: C0001418
Disease: Adenocarcinoma
Adenocarcinoma 		0.010 1.000 1 2017 2017
dbSNP: rs2229094
rs2229094
LTA ; LOC100287329
0.776 0.320 6 31572779 missense variant T/C snv 0.27 0.27
CUI: C0001418
Disease: Adenocarcinoma
Adenocarcinoma 		0.010 1.000 1 2013 2013
dbSNP: rs750749
rs750749 		6 14141866 downstream gene variant T/C snv 0.27
CUI: C0001418
Disease: Adenocarcinoma
Adenocarcinoma 		0.010 1.000 1 2009 2009
dbSNP: rs17429138
rs17429138
LOC107986169
3 189527804 intergenic variant A/G snv 0.26
CUI: C0001418
Disease: Adenocarcinoma
Adenocarcinoma 		0.010 1.000 1 2011 2011
dbSNP: rs3212227
rs3212227
IL12B
0.566 0.840 5 159315942 3 prime UTR variant T/G snv 0.26
CUI: C0001418
Disease: Adenocarcinoma
Adenocarcinoma 		0.010 1.000 1 2015 2015
dbSNP: rs10503380
rs10503380 		1.000 0.080 8 9552985 upstream gene variant C/T snv 0.25
CUI: C0001418
Disease: Adenocarcinoma
Adenocarcinoma 		0.010 1.000 1 2015 2015
dbSNP: rs11134527
rs11134527
SLIT3 ; MIR218-2
0.677 0.400 5 168768351 intron variant G/A snv 0.25
CUI: C0001418
Disease: Adenocarcinoma
Adenocarcinoma 		0.010 1.000 1 2018 2018