Source: ALL

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs1131691014
rs1131691014
TP53
0.439 0.800 17 7676154 frameshift variant -/C ins
CUI: C0686619
Disease: Secondary malignant neoplasm of lymph node
Secondary malignant neoplasm of lymph node 		0.010 1.000 1 2016 2016
dbSNP: rs1187825488
rs1187825488
LINC00960 ; ZNF717 ; MIR4273
1.000 0.080 3 75737670 frameshift variant TT/- del 7.9E-04
CUI: C0686619
Disease: Secondary malignant neoplasm of lymph node
Secondary malignant neoplasm of lymph node 		0.010 1.000 1 2019 2019
dbSNP: rs10754339
rs10754339
VTCN1
0.882 0.120 1 117147650 3 prime UTR variant G/A snv 0.88 0.76
CUI: C0686619
Disease: Secondary malignant neoplasm of lymph node
Secondary malignant neoplasm of lymph node 		0.010 1.000 1 2009 2009
dbSNP: rs10889677
rs10889677
IL23R
0.627 0.720 1 67259437 3 prime UTR variant C/A snv 0.27
CUI: C0686619
Disease: Secondary malignant neoplasm of lymph node
Secondary malignant neoplasm of lymph node 		0.010 1.000 1 2012 2012
dbSNP: rs11064
rs11064
TNFAIP8
0.807 0.120 5 119393693 3 prime UTR variant A/G snv 0.27
CUI: C0686619
Disease: Secondary malignant neoplasm of lymph node
Secondary malignant neoplasm of lymph node 		0.010 1.000 1 2019 2019
dbSNP: rs11077
rs11077
POLR1C ; XPO5
0.732 0.320 6 43523209 3 prime UTR variant T/G snv 0.47
CUI: C0686619
Disease: Secondary malignant neoplasm of lymph node
Secondary malignant neoplasm of lymph node 		0.010 < 0.001 1 2016 2016
dbSNP: rs1205
rs1205
CRP
0.602 0.680 1 159712443 3 prime UTR variant C/T snv 0.30
CUI: C0686619
Disease: Secondary malignant neoplasm of lymph node
Secondary malignant neoplasm of lymph node 		0.010 1.000 1 2014 2014
dbSNP: rs1292037
rs1292037
VMP1 ; MIR21
0.827 0.200 17 59841547 3 prime UTR variant T/C snv 0.18
CUI: C0686619
Disease: Secondary malignant neoplasm of lymph node
Secondary malignant neoplasm of lymph node 		0.010 1.000 1 2018 2018
dbSNP: rs1360485
rs1360485
HMGB1
0.742 0.320 13 30457747 3 prime UTR variant C/T snv 0.58
CUI: C0686619
Disease: Secondary malignant neoplasm of lymph node
Secondary malignant neoplasm of lymph node 		0.010 1.000 1 2018 2018
dbSNP: rs14304
rs14304
CCL18
1.000 0.080 17 36071135 3 prime UTR variant T/C snv 0.78
CUI: C0686619
Disease: Secondary malignant neoplasm of lymph node
Secondary malignant neoplasm of lymph node 		0.010 1.000 1 2012 2012
dbSNP: rs2288496
rs2288496
TSHR ; LOC101928462
0.925 0.120 14 81145770 3 prime UTR variant T/C snv 0.39
CUI: C0686619
Disease: Secondary malignant neoplasm of lymph node
Secondary malignant neoplasm of lymph node 		0.010 1.000 1 2019 2019
dbSNP: rs2288947
rs2288947
TINCR
0.827 0.160 19 5562104 3 prime UTR variant G/A snv 0.45
CUI: C0686619
Disease: Secondary malignant neoplasm of lymph node
Secondary malignant neoplasm of lymph node 		0.010 1.000 1 2017 2017
dbSNP: rs2976392
rs2976392
PSCA ; JRK
0.724 0.240 8 142681514 3 prime UTR variant G/A snv 0.46 0.45
CUI: C0686619
Disease: Secondary malignant neoplasm of lymph node
Secondary malignant neoplasm of lymph node 		0.010 1.000 1 2016 2016
dbSNP: rs3748067
rs3748067
IL17A
0.672 0.320 6 52190541 3 prime UTR variant C/T snv 6.2E-02
CUI: C0686619
Disease: Secondary malignant neoplasm of lymph node
Secondary malignant neoplasm of lymph node 		0.010 1.000 1 2012 2012
dbSNP: rs3809865
rs3809865
ITGB3 ; THCAT158
0.790 0.240 17 47311220 3 prime UTR variant T/A;G snv
CUI: C0686619
Disease: Secondary malignant neoplasm of lymph node
Secondary malignant neoplasm of lymph node 		0.010 1.000 1 2012 2012
dbSNP: rs560890523
rs560890523
KRAS
1.000 0.080 12 25205729 3 prime UTR variant TT/-;T delins
CUI: C0686619
Disease: Secondary malignant neoplasm of lymph node
Secondary malignant neoplasm of lymph node 		0.010 1.000 1 2017 2017
dbSNP: rs57698689
rs57698689
KRAS
1.000 0.080 12 25205729 3 prime UTR variant TT/-;T delins 0.48
CUI: C0686619
Disease: Secondary malignant neoplasm of lymph node
Secondary malignant neoplasm of lymph node 		0.010 1.000 1 2017 2017
dbSNP: rs7628626
rs7628626
CD80 ; TIMMDC1
0.925 0.120 3 119525574 3 prime UTR variant A/C snv 0.82
CUI: C0686619
Disease: Secondary malignant neoplasm of lymph node
Secondary malignant neoplasm of lymph node 		0.010 1.000 1 2015 2015
dbSNP: rs7963551
rs7963551
RAD52
0.807 0.160 12 912349 3 prime UTR variant T/G snv 0.13
CUI: C0686619
Disease: Secondary malignant neoplasm of lymph node
Secondary malignant neoplasm of lymph node 		0.010 1.000 1 2017 2017
dbSNP: rs8371
rs8371
XIAP
0.925 0.120 X 123912065 3 prime UTR variant C/T snv 0.25 0.19
CUI: C0686619
Disease: Secondary malignant neoplasm of lymph node
Secondary malignant neoplasm of lymph node 		0.010 1.000 1 2017 2017
dbSNP: rs9856
rs9856
XIAP
0.925 0.120 X 123911791 3 prime UTR variant C/T snv 0.57
CUI: C0686619
Disease: Secondary malignant neoplasm of lymph node
Secondary malignant neoplasm of lymph node 		0.010 1.000 1 2017 2017
dbSNP: rs145204276
rs145204276
GAS5 ; ZBTB37 ; SNORD74 ; SNORD75 ; SNORD76 ; SNORD77 ; SNORA103
0.658 0.320 1 173868254 splice donor variant CAAGG/- delins 8.8E-02
CUI: C0686619
Disease: Secondary malignant neoplasm of lymph node
Secondary malignant neoplasm of lymph node 		0.010 1.000 1 2019 2019
dbSNP: rs1478604
rs1478604
THBS1
0.807 0.240 15 39581120 5 prime UTR variant T/C snv 0.40
CUI: C0686619
Disease: Secondary malignant neoplasm of lymph node
Secondary malignant neoplasm of lymph node 		0.010 1.000 1 2012 2012
dbSNP: rs174538
rs174538
TMEM258 ; FEN1 ; MIR611
0.701 0.440 11 61792609 5 prime UTR variant G/A snv 0.34 0.26
CUI: C0686619
Disease: Secondary malignant neoplasm of lymph node
Secondary malignant neoplasm of lymph node 		0.010 1.000 1 2016 2016
dbSNP: rs1800872
rs1800872
IL10 ; IL19
0.495 0.840 1 206773062 5 prime UTR variant T/G snv 0.69
CUI: C0686619
Disease: Secondary malignant neoplasm of lymph node
Secondary malignant neoplasm of lymph node 		0.010 1.000 1 2011 2011