Source: GWASDB

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs10168266
rs10168266
STAT4
0.776 0.400 2 191071078 intron variant C/T snv 0.19
CUI: C0024141
Disease: Lupus Erythematosus, Systemic
Lupus Erythematosus, Systemic 		0.700 1.000 1 2013 2013
dbSNP: rs1980493
rs1980493
BTNL2 ; TSBP1-AS1
0.776 0.400 6 32395438 intron variant T/C snv 0.13
CUI: C0024141
Disease: Lupus Erythematosus, Systemic
Lupus Erythematosus, Systemic 		0.700 1.000 1 2014 2014
dbSNP: rs2431697
rs2431697 		0.776 0.240 5 160452971 intron variant T/C snv 0.44
CUI: C0024141
Disease: Lupus Erythematosus, Systemic
Lupus Erythematosus, Systemic 		0.840 1.000 1 2008 2017
dbSNP: rs389884
rs389884
CYP21A2 ; DXO ; STK19
0.776 0.440 6 31973120 non coding transcript exon variant A/G snv 7.1E-02
CUI: C0024141
Disease: Lupus Erythematosus, Systemic
Lupus Erythematosus, Systemic 		0.700 1.000 1 2014 2014
dbSNP: rs652888
rs652888
CYP21A2 ; EHMT2 ; EHMT2-AS1 ; LOC107986588
0.776 0.480 6 31883457 non coding transcript exon variant A/G snv 0.18 0.20
CUI: C0024141
Disease: Lupus Erythematosus, Systemic
Lupus Erythematosus, Systemic 		0.700 1.000 1 2014 2014
dbSNP: rs886424
rs886424
LINC00243
0.776 0.320 6 30814225 non coding transcript exon variant C/T snv 7.1E-02 8.7E-02
CUI: C0024141
Disease: Lupus Erythematosus, Systemic
Lupus Erythematosus, Systemic 		0.700 1.000 1 2014 2014
dbSNP: rs7775397
rs7775397
TSBP1 ; TSBP1-AS1
0.790 0.400 6 32293475 missense variant T/G snv 6.0E-02 6.4E-02
CUI: C0024141
Disease: Lupus Erythematosus, Systemic
Lupus Erythematosus, Systemic 		0.700 1.000 2 2008 2014
dbSNP: rs2647012
rs2647012 		0.790 0.320 6 32696681 intergenic variant T/C snv 0.64
CUI: C0024141
Disease: Lupus Erythematosus, Systemic
Lupus Erythematosus, Systemic 		0.800 1.000 1 2014 2014
dbSNP: rs2855812
rs2855812
MICB
0.790 0.360 6 31504943 intron variant G/T snv 0.23
CUI: C0024141
Disease: Lupus Erythematosus, Systemic
Lupus Erythematosus, Systemic 		0.700 1.000 1 2014 2014
dbSNP: rs2856718
rs2856718 		0.790 0.360 6 32702478 downstream gene variant C/T snv 0.34
CUI: C0024141
Disease: Lupus Erythematosus, Systemic
Lupus Erythematosus, Systemic 		0.700 1.000 1 2014 2014
dbSNP: rs3130564
rs3130564
PSORS1C1
0.790 0.360 6 31133897 intron variant C/T snv 0.14
CUI: C0024141
Disease: Lupus Erythematosus, Systemic
Lupus Erythematosus, Systemic 		0.700 1.000 1 2014 2014
dbSNP: rs3132580
rs3132580
MUCL3 ; SFTA2 ; HCG21
0.790 0.360 6 30952347 missense variant G/A snv 8.0E-02 9.3E-02
CUI: C0024141
Disease: Lupus Erythematosus, Systemic
Lupus Erythematosus, Systemic 		0.700 1.000 1 2014 2014
dbSNP: rs3134942
rs3134942
NOTCH4
0.790 0.320 6 32200994 synonymous variant G/T snv 9.7E-02 0.11
CUI: C0024141
Disease: Lupus Erythematosus, Systemic
Lupus Erythematosus, Systemic 		0.700 1.000 1 2014 2014
dbSNP: rs4324798
rs4324798 		0.790 0.240 6 28808340 intergenic variant G/A snv 7.2E-02
CUI: C0024141
Disease: Lupus Erythematosus, Systemic
Lupus Erythematosus, Systemic 		0.700 1.000 1 2014 2014
dbSNP: rs6568431
rs6568431
ATG5
0.790 0.320 6 106140931 intron variant A/C snv 0.61
CUI: C0024141
Disease: Lupus Erythematosus, Systemic
Lupus Erythematosus, Systemic 		0.800 1.000 1 2008 2017
dbSNP: rs1794282
rs1794282 		0.807 0.320 6 32698749 intergenic variant C/T snv 6.4E-02
CUI: C0024141
Disease: Lupus Erythematosus, Systemic
Lupus Erythematosus, Systemic 		0.700 1.000 2 2008 2014
dbSNP: rs7812879
rs7812879 		0.807 0.320 8 11482672 upstream gene variant T/A;C snv
CUI: C0024141
Disease: Lupus Erythematosus, Systemic
Lupus Erythematosus, Systemic 		0.800 1.000 2 2009 2013
dbSNP: rs17266594
rs17266594
BANK1
0.807 0.280 4 101829765 intron variant T/C snv 0.25 0.27
CUI: C0024141
Disease: Lupus Erythematosus, Systemic
Lupus Erythematosus, Systemic 		0.850 1.000 1 2008 2017
dbSNP: rs2254546
rs2254546 		0.807 0.400 8 11486171 upstream gene variant A/G snv 0.83
CUI: C0024141
Disease: Lupus Erythematosus, Systemic
Lupus Erythematosus, Systemic 		0.800 1.000 1 2013 2013
dbSNP: rs2269426
rs2269426
TNXB
0.807 0.280 6 32108722 intron variant G/A snv 0.35
CUI: C0024141
Disease: Lupus Erythematosus, Systemic
Lupus Erythematosus, Systemic 		0.700 1.000 1 2014 2014
dbSNP: rs2844511
rs2844511 		0.807 0.200 6 31422007 intron variant A/G;T snv
CUI: C0024141
Disease: Lupus Erythematosus, Systemic
Lupus Erythematosus, Systemic 		0.700 1.000 1 2014 2014
dbSNP: rs3094054
rs3094054 		0.807 0.280 6 30365728 upstream gene variant G/A;T snv
CUI: C0024141
Disease: Lupus Erythematosus, Systemic
Lupus Erythematosus, Systemic 		0.700 1.000 1 2014 2014
dbSNP: rs3130380
rs3130380
HCG18 ; HCG17
0.807 0.280 6 30311353 intron variant G/A snv 6.6E-02
CUI: C0024141
Disease: Lupus Erythematosus, Systemic
Lupus Erythematosus, Systemic 		0.700 1.000 1 2014 2014
dbSNP: rs3130544
rs3130544 		0.807 0.360 6 31090563 intergenic variant C/A snv 7.4E-02
CUI: C0024141
Disease: Lupus Erythematosus, Systemic
Lupus Erythematosus, Systemic 		0.700 1.000 1 2014 2014
dbSNP: rs3131296
rs3131296
NOTCH4
0.807 0.320 6 32205216 intron variant C/T snv 0.11
CUI: C0024141
Disease: Lupus Erythematosus, Systemic
Lupus Erythematosus, Systemic 		0.700 1.000 1 2014 2014