Source: BEFREE

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs10420252
rs10420252
COX6B1
1.000 0.080 19 35648270 upstream gene variant G/A snv 9.7E-02
CUI: C0027627
Disease: Neoplasm Metastasis
Neoplasm Metastasis 		0.010 1.000 1 2012 2012
dbSNP: rs1047781
rs1047781
FUT2 ; LOC105447645
0.790 0.200 19 48703374 missense variant A/T snv 3.6E-02 1.2E-02
CUI: C0027627
Disease: Neoplasm Metastasis
Neoplasm Metastasis 		0.010 1.000 1 2014 2014
dbSNP: rs1052667
rs1052667
ARHGAP35
0.882 0.040 19 47004177 3 prime UTR variant C/G;T snv
CUI: C0027627
Disease: Neoplasm Metastasis
Neoplasm Metastasis 		0.010 1.000 1 2014 2014
dbSNP: rs1458974438
rs1458974438
STK11
0.807 0.080 19 1206957 missense variant G/A snv
CUI: C0027627
Disease: Neoplasm Metastasis
Neoplasm Metastasis 		0.010 1.000 1 2010 2010
dbSNP: rs17632542
rs17632542
KLK3
0.925 0.080 19 50858501 missense variant T/C snv 5.5E-02 4.9E-02
CUI: C0027627
Disease: Neoplasm Metastasis
Neoplasm Metastasis 		0.010 1.000 1 2008 2008
dbSNP: rs1800469
rs1800469
TGFB1 ; B9D2
0.547 0.760 19 41354391 intron variant A/G snv 0.69
CUI: C0027627
Disease: Neoplasm Metastasis
Neoplasm Metastasis 		0.010 1.000 1 2019 2019
dbSNP: rs2336219
rs2336219
ERCC1 ; CD3EAP
1.000 0.080 19 45409148 missense variant G/A snv 0.21 0.19
CUI: C0027627
Disease: Neoplasm Metastasis
Neoplasm Metastasis 		0.010 1.000 1 2015 2015
dbSNP: rs3212986
rs3212986
ERCC1 ; CD3EAP
0.620 0.400 19 45409478 stop gained C/A;G;T snv 0.29; 4.3E-06; 4.3E-06
CUI: C0027627
Disease: Neoplasm Metastasis
Neoplasm Metastasis 		0.010 1.000 1 2019 2019
dbSNP: rs3213245
rs3213245
XRCC1 ; PINLYP
0.742 0.240 19 43575535 5 prime UTR variant G/A snv 0.65 0.60
CUI: C0027627
Disease: Neoplasm Metastasis
Neoplasm Metastasis 		0.010 1.000 1 2018 2018
dbSNP: rs3219175
rs3219175
RETN
0.807 0.240 19 7668969 upstream gene variant G/A snv 5.0E-02
CUI: C0027627
Disease: Neoplasm Metastasis
Neoplasm Metastasis 		0.010 1.000 1 2017 2017
dbSNP: rs6510502
rs6510502
COX6B1
1.000 0.080 19 35647577 upstream gene variant A/C;G snv
CUI: C0027627
Disease: Neoplasm Metastasis
Neoplasm Metastasis 		0.010 1.000 1 2012 2012
dbSNP: rs735482
rs735482
ERCC1 ; CD3EAP
0.742 0.160 19 45408744 missense variant A/C snv 0.21 0.20
CUI: C0027627
Disease: Neoplasm Metastasis
Neoplasm Metastasis 		0.010 1.000 1 2015 2015
dbSNP: rs8103851
rs8103851
PRKCG
0.851 0.040 19 53894400 intron variant C/G snv 0.44
CUI: C0027627
Disease: Neoplasm Metastasis
Neoplasm Metastasis 		0.010 1.000 1 2014 2014
dbSNP: rs895819
rs895819
LOC284454 ; MIR23A ; MIR24-2 ; MIR27A
0.623 0.560 19 13836478 non coding transcript exon variant T/A;C;G snv 0.34 0.38
CUI: C0027627
Disease: Neoplasm Metastasis
Neoplasm Metastasis 		0.010 1.000 1 2015 2015
dbSNP: rs11662595
rs11662595
HRH4
0.882 0.120 18 24477006 missense variant A/G snv 8.6E-02 7.6E-02
CUI: C0027627
Disease: Neoplasm Metastasis
Neoplasm Metastasis 		0.010 1.000 1 2017 2017
dbSNP: rs2229080
rs2229080
DCC
0.742 0.320 18 52906232 missense variant C/A;G snv 0.45
CUI: C0027627
Disease: Neoplasm Metastasis
Neoplasm Metastasis 		0.010 1.000 1 2016 2016
dbSNP: rs762846821
rs762846821
TP53
0.614 0.320 17 7675151 missense variant C/A;T snv 8.0E-06
CUI: C0027627
Disease: Neoplasm Metastasis
Neoplasm Metastasis 		0.040 1.000 4 2010 2015
dbSNP: rs1042522
rs1042522
TP53
0.426 0.800 17 7676154 missense variant G/C;T snv 0.67
CUI: C0027627
Disease: Neoplasm Metastasis
Neoplasm Metastasis 		0.030 1.000 3 2010 2014
dbSNP: rs1131691014
rs1131691014
TP53
0.439 0.800 17 7676154 frameshift variant -/C ins
CUI: C0027627
Disease: Neoplasm Metastasis
Neoplasm Metastasis 		0.020 1.000 2 2010 2014
dbSNP: rs121912664
rs121912664
TP53
0.630 0.320 17 7670699 missense variant C/A;G;T snv 1.2E-05
CUI: C0027627
Disease: Neoplasm Metastasis
Neoplasm Metastasis 		0.020 1.000 2 2001 2011
dbSNP: rs121917887
rs121917887
NME1 ; NME1-NME2
0.790 0.120 17 51161744 missense variant A/G snv 6.0E-05 7.0E-05
CUI: C0027627
Disease: Neoplasm Metastasis
Neoplasm Metastasis 		0.020 1.000 2 2001 2004
dbSNP: rs2269772
rs2269772
ITGA3
0.925 0.080 17 50072022 synonymous variant C/T snv 0.17 0.19
CUI: C0027627
Disease: Neoplasm Metastasis
Neoplasm Metastasis 		0.020 1.000 2 2011 2012
dbSNP: rs28934576
rs28934576
TP53
0.554 0.600 17 7673802 missense variant C/A;G;T snv 4.0E-06; 1.6E-05
CUI: C0027627
Disease: Neoplasm Metastasis
Neoplasm Metastasis 		0.020 1.000 2 2007 2017
dbSNP: rs878854066
rs878854066
TP53
0.439 0.800 17 7676153 missense variant GG/AC mnv
CUI: C0027627
Disease: Neoplasm Metastasis
Neoplasm Metastasis 		0.020 1.000 2 2010 2014
dbSNP: rs10491121
rs10491121
CCL4 ; LOC101927369
0.882 0.120 17 36102943 upstream gene variant G/A snv 0.32
CUI: C0027627
Disease: Neoplasm Metastasis
Neoplasm Metastasis 		0.010 1.000 1 2018 2018