Source: BEFREE

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs17125721
rs17125721
PSEN1
0.763 0.120 14 73206470 missense variant A/G snv 1.5E-02 1.5E-02
CUI: C0002395
Disease: Alzheimer's Disease
Alzheimer's Disease 		0.090 1.000 9 1998 2019
dbSNP: rs1800562
rs1800562
HFE ; LOC108783645
0.435 0.880 6 26092913 missense variant G/A snv 3.3E-02 3.8E-02
CUI: C0002395
Disease: Alzheimer's Disease
Alzheimer's Disease 		0.090 0.778 9 2004 2014
dbSNP: rs2230806
rs2230806
ABCA1
0.689 0.280 9 104858586 missense variant C/T snv 0.32 0.39
CUI: C0002395
Disease: Alzheimer's Disease
Alzheimer's Disease 		0.090 0.889 9 2006 2018
dbSNP: rs429358
rs429358
APOE
0.590 0.600 19 44908684 missense variant T/C snv 0.14 0.16
CUI: C0002395
Disease: Alzheimer's Disease
Alzheimer's Disease 		0.890 0.933 9 2005 2019
dbSNP: rs63751039
rs63751039
APP
0.776 0.200 21 25891855 missense variant T/C snv
CUI: C0002395
Disease: Alzheimer's Disease
Alzheimer's Disease 		0.790 1.000 9 2001 2019
dbSNP: rs662
rs662
PON1
0.485 0.840 7 95308134 missense variant T/C snv 0.38 0.42
CUI: C0002395
Disease: Alzheimer's Disease
Alzheimer's Disease 		0.090 0.667 9 2003 2014
dbSNP: rs143624519
rs143624519
MAPT
0.724 0.240 17 45991484 missense variant G/A;T snv 1.5E-03; 1.2E-05
CUI: C0002395
Disease: Alzheimer's Disease
Alzheimer's Disease 		0.080 0.875 8 2012 2019
dbSNP: rs17571
rs17571
CTSD
0.827 0.120 11 1761364 missense variant G/A snv 7.0E-02 6.2E-02
CUI: C0002395
Disease: Alzheimer's Disease
Alzheimer's Disease 		0.080 1.000 8 2003 2018
dbSNP: rs1799983
rs1799983
NOS3
0.430 0.880 7 150999023 missense variant T/A;G snv 0.75
CUI: C0002395
Disease: Alzheimer's Disease
Alzheimer's Disease 		0.080 0.875 8 2000 2015
dbSNP: rs371425292
rs371425292
APP
0.763 0.160 21 25897627 missense variant C/A;T snv 8.0E-06
CUI: C0002395
Disease: Alzheimer's Disease
Alzheimer's Disease 		0.080 1.000 8 1998 2018
dbSNP: rs3818361
rs3818361
CR1
0.851 0.080 1 207611623 intron variant A/G snv 0.74
CUI: C0002395
Disease: Alzheimer's Disease
Alzheimer's Disease 		0.880 1.000 8 2009 2017
dbSNP: rs5848
rs5848
GRN ; FAM171A2
0.708 0.120 17 44352876 3 prime UTR variant C/T snv 0.41
CUI: C0002395
Disease: Alzheimer's Disease
Alzheimer's Disease 		0.080 1.000 8 2009 2017
dbSNP: rs63750424
rs63750424
MAPT
0.677 0.240 17 46024061 missense variant C/T snv 1.6E-05
CUI: C0002395
Disease: Alzheimer's Disease
Alzheimer's Disease 		0.080 1.000 8 2002 2019
dbSNP: rs63751273
rs63751273
MAPT
0.645 0.280 17 46010389 missense variant C/T snv
CUI: C0002395
Disease: Alzheimer's Disease
Alzheimer's Disease 		0.080 1.000 8 2003 2019
dbSNP: rs781049584
rs781049584
APP
0.724 0.280 21 26021917 missense variant T/G snv 8.2E-06 7.0E-06
CUI: C0002395
Disease: Alzheimer's Disease
Alzheimer's Disease 		0.080 1.000 8 2002 2014
dbSNP: rs9331888
rs9331888
CLU ; MIR6843
0.827 0.200 8 27611345 5 prime UTR variant C/G snv 0.35 0.28
CUI: C0002395
Disease: Alzheimer's Disease
Alzheimer's Disease 		0.880 1.000 8 2009 2019
dbSNP: rs3810950
rs3810950
CHAT
0.882 0.080 10 49616573 missense variant G/A snv 0.21 0.18
CUI: C0002395
Disease: Alzheimer's Disease
Alzheimer's Disease 		0.070 0.857 7 2005 2018
dbSNP: rs397507444
rs397507444
MTHFR
0.405 0.880 1 11794407 missense variant T/G snv
CUI: C0002395
Disease: Alzheimer's Disease
Alzheimer's Disease 		0.070 0.714 7 2002 2017
dbSNP: rs5882
rs5882
CETP
0.649 0.400 16 56982180 missense variant G/A;C snv 0.62
CUI: C0002395
Disease: Alzheimer's Disease
Alzheimer's Disease 		0.070 1.000 7 2007 2018
dbSNP: rs63750526
rs63750526
PSEN1
0.776 0.160 14 73192832 missense variant C/A snv
CUI: C0002395
Disease: Alzheimer's Disease
Alzheimer's Disease 		0.070 1.000 7 2000 2014
dbSNP: rs669
rs669
A2M ; KLRG1
0.851 0.080 12 9079672 missense variant T/C snv 0.31 0.33
CUI: C0002395
Disease: Alzheimer's Disease
Alzheimer's Disease 		0.070 0.714 7 1999 2014
dbSNP: rs1035071612
rs1035071612
LDLR ; MIR6886
0.763 0.240 19 11113361 missense variant C/A;T snv 4.0E-06
CUI: C0002395
Disease: Alzheimer's Disease
Alzheimer's Disease 		0.060 1.000 6 1998 2008
dbSNP: rs10410544
rs10410544
SIRT2
0.827 0.120 19 38894892 intron variant T/C snv 0.68 0.67
CUI: C0002395
Disease: Alzheimer's Disease
Alzheimer's Disease 		0.060 0.833 6 2013 2019
dbSNP: rs1052133
rs1052133
OGG1 ; CAMK1
0.476 0.800 3 9757089 missense variant C/G snv 0.27 0.22
CUI: C0002395
Disease: Alzheimer's Disease
Alzheimer's Disease 		0.060 1.000 6 2007 2019
dbSNP: rs1223904774
rs1223904774
APP
0.790 0.120 21 25891772 missense variant C/T snv 4.0E-06 7.0E-06
CUI: C0002395
Disease: Alzheimer's Disease
Alzheimer's Disease 		0.060 1.000 6 1997 2014