Source: BEFREE

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs138880
rs138880
BRD1
1.000 0.040 22 49824963 intron variant A/C snv 0.36
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.820 0.667 2 2010 2017
dbSNP: rs139887
rs139887
POLR2F ; SOX10
1.000 0.040 22 37975389 intron variant G/C;T snv
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.020 1.000 2 2012 2013
dbSNP: rs1400205549
rs1400205549
ARHGEF7
1.000 0.040 13 111267594 missense variant A/G snv 4.0E-06
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.020 1.000 2 2007 2016
dbSNP: rs140700
rs140700
SLC6A4
0.925 0.040 17 30216371 intron variant C/A;G;T snv
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.020 1.000 2 2013 2019
dbSNP: rs143835330
rs143835330
KALRN
1.000 0.040 3 124671722 missense variant C/A;T snv 2.3E-04; 4.0E-06
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.020 1.000 2 2012 2018
dbSNP: rs165849
rs165849
ARVCF
1.000 0.040 22 19971146 intron variant G/A snv 0.55
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.020 1.000 2 2009 2009
dbSNP: rs1800557
rs1800557
APP
0.925 0.040 21 25891795 missense variant G/A snv 4.0E-05 4.2E-05
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.020 1.000 2 1994 1995
dbSNP: rs1816072
rs1816072
GABRB2
1.000 0.040 5 161332649 intron variant A/G snv 0.45
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.020 1.000 2 2006 2008
dbSNP: rs204887
rs204887
TNXB
1.000 0.040 6 32061449 stop gained A/G;T snv 0.69; 4.1E-06
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.020 1.000 2 2004 2007
dbSNP: rs2075507
rs2075507
COMT ; TXNRD2
0.925 0.040 22 19940569 intron variant G/A;T snv
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.020 0.500 2 2007 2009
dbSNP: rs2237562
rs2237562
GRM3 ; LOC105375382 ; GRM3-AS1
1.000 0.040 7 86792916 intron variant T/C snv 0.40
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.020 1.000 2 2008 2017
dbSNP: rs2241621
rs2241621
STON2
1.000 0.040 14 81270732 missense variant A/C;T snv 0.52; 4.0E-06
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.020 0.500 2 2011 2013
dbSNP: rs2276939
rs2276939
H2AZ1 ; H2AZ1-DT
1.000 0.040 4 99949218 non coding transcript exon variant T/A;G snv
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.020 1.000 2 2015 2015
dbSNP: rs2299225
rs2299225
GRM3
1.000 0.040 7 86818264 intron variant T/G snv 2.3E-02
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.020 < 0.001 2 2005 2008
dbSNP: rs2299472
rs2299472
GRM8
1.000 0.040 7 126580415 intron variant C/A snv 0.30
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.020 1.000 2 2004 2014
dbSNP: rs2312147
rs2312147
VRK2
1.000 0.040 2 57995793 intron variant T/C snv 0.70
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.820 1.000 2 2009 2016
dbSNP: rs2373000
rs2373000
QPCT
1.000 0.040 2 37365485 intron variant C/A;T snv
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.820 0.667 2 2013 2016
dbSNP: rs2433320
rs2433320 		0.925 0.040 4 94449654 upstream gene variant G/A snv 0.37
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.020 1.000 2 2006 2008
dbSNP: rs2433322
rs2433322
PDLIM5
0.925 0.040 4 94458590 intron variant A/G snv 0.37
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.020 1.000 2 2006 2008
dbSNP: rs2461491
rs2461491
PPP3CC
1.000 0.040 8 22503739 intron variant A/C;G snv
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.020 1.000 2 2007 2011
dbSNP: rs2535629
rs2535629
ITIH3
0.827 0.040 3 52799203 intron variant G/A;C snv
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.720 0.750 2 2013 2019
dbSNP: rs2619539
rs2619539
DTNBP1
0.925 0.040 6 15620624 intron variant C/A;G snv
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.020 1.000 2 2008 2009
dbSNP: rs2958182
rs2958182
TCF4 ; TCF4-AS1
0.882 0.040 18 55481790 intron variant A/T snv 0.72
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.020 1.000 2 2013 2015
dbSNP: rs2975226
rs2975226
SLC6A3
0.925 0.040 5 1445501 upstream gene variant A/T snv 0.50
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.020 1.000 2 2010 2020
dbSNP: rs3087494
rs3087494
PLA2G12A
1.000 0.040 4 109710465 3 prime UTR variant A/G snv 0.49
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.020 1.000 2 2016 2018