Source: GWASDB

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs6694527
rs6694527
SLC2A5
1 9058969 intron variant G/A snv 2.4E-02
CUI: C0428472
Disease: Serum HDL cholesterol measurement
Serum HDL cholesterol measurement 		0.700 1.000 1 2012 2012
dbSNP: rs7516521
rs7516521
WNT2B
1 112512314 intron variant T/G snv 7.0E-02
CUI: C0428472
Disease: Serum HDL cholesterol measurement
Serum HDL cholesterol measurement 		0.700 1.000 1 2012 2012
dbSNP: rs7518440
rs7518440
ARNT
1 150818286 non coding transcript exon variant A/G;T snv
CUI: C0428472
Disease: Serum HDL cholesterol measurement
Serum HDL cholesterol measurement 		0.700 1.000 1 2012 2012
dbSNP: rs7528419
rs7528419
CELSR2
0.851 0.080 1 109274570 3 prime UTR variant A/G snv 0.23
CUI: C0428472
Disease: Serum HDL cholesterol measurement
Serum HDL cholesterol measurement 		0.700 1.000 1 2012 2012
dbSNP: rs9332637
rs9332637
F5
1 169525758 intron variant G/A;T snv
CUI: C0428472
Disease: Serum HDL cholesterol measurement
Serum HDL cholesterol measurement 		0.700 1.000 1 2012 2012
dbSNP: rs9332682
rs9332682
F5
1 169584622 intron variant G/A snv 3.3E-04
CUI: C0428472
Disease: Serum HDL cholesterol measurement
Serum HDL cholesterol measurement 		0.700 1.000 1 2012 2012
dbSNP: rs9436735
rs9436735
LEPR ; LEPROT
1 65419378 upstream gene variant C/G snv 2.5E-02
CUI: C0428472
Disease: Serum HDL cholesterol measurement
Serum HDL cholesterol measurement 		0.700 1.000 1 2012 2012
dbSNP: rs956084
rs956084
FAF1
1 50445675 intron variant C/T snv 3.2E-02
CUI: C0428472
Disease: Serum HDL cholesterol measurement
Serum HDL cholesterol measurement 		0.700 1.000 1 2012 2012
dbSNP: rs1042034
rs1042034
APOB
0.851 0.240 2 21002409 missense variant C/T snv 0.70 0.78
CUI: C0428472
Disease: Serum HDL cholesterol measurement
Serum HDL cholesterol measurement 		0.700 1.000 2 2010 2012
dbSNP: rs11902417
rs11902417 		2 20976028 intergenic variant G/A snv 0.25
CUI: C0428472
Disease: Serum HDL cholesterol measurement
Serum HDL cholesterol measurement 		0.700 1.000 2 2010 2012
dbSNP: rs12328675
rs12328675
COBLL1
2 164684290 3 prime UTR variant T/C snv 0.13
CUI: C0428472
Disease: Serum HDL cholesterol measurement
Serum HDL cholesterol measurement 		0.700 1.000 2 2010 2013
dbSNP: rs2972146
rs2972146 		0.882 0.040 2 226235982 intergenic variant G/T snv 0.72
CUI: C0428472
Disease: Serum HDL cholesterol measurement
Serum HDL cholesterol measurement 		0.700 1.000 2 2010 2013
dbSNP: rs673548
rs673548
APOB
0.925 0.120 2 21014672 intron variant G/A;T snv
CUI: C0428472
Disease: Serum HDL cholesterol measurement
Serum HDL cholesterol measurement 		0.700 1.000 2 2012 2012
dbSNP: rs1000879
rs1000879
VIL1
2 218439407 intron variant G/A snv 4.1E-02
CUI: C0428472
Disease: Serum HDL cholesterol measurement
Serum HDL cholesterol measurement 		0.700 1.000 1 2012 2012
dbSNP: rs10200587
rs10200587
BMPR2
2 202554561 intron variant A/G snv 7.0E-03
CUI: C0428472
Disease: Serum HDL cholesterol measurement
Serum HDL cholesterol measurement 		0.700 1.000 1 2012 2012
dbSNP: rs1047891
rs1047891
CPS1
0.827 0.200 2 210675783 missense variant C/A snv 0.30 0.33
CUI: C0428472
Disease: Serum HDL cholesterol measurement
Serum HDL cholesterol measurement 		0.700 1.000 1 2013 2013
dbSNP: rs13389219
rs13389219
COBLL1
1.000 0.080 2 164672366 intron variant C/T snv 0.47
CUI: C0428472
Disease: Serum HDL cholesterol measurement
Serum HDL cholesterol measurement 		0.700 1.000 1 2012 2012
dbSNP: rs17006555
rs17006555
ATP6V1B1 ; VAX2 ; ATP6V1B1-AS1
2 70942848 intron variant G/C snv 2.6E-02
CUI: C0428472
Disease: Serum HDL cholesterol measurement
Serum HDL cholesterol measurement 		0.700 1.000 1 2012 2012
dbSNP: rs2678379
rs2678379
APOB
1.000 0.080 2 21003688 intron variant A/G snv 0.76
CUI: C0428472
Disease: Serum HDL cholesterol measurement
Serum HDL cholesterol measurement 		0.700 1.000 1 2012 2012
dbSNP: rs2943634
rs2943634 		0.763 0.200 2 226203364 intergenic variant A/C;G snv
CUI: C0428472
Disease: Serum HDL cholesterol measurement
Serum HDL cholesterol measurement 		0.700 1.000 1 2012 2012
dbSNP: rs34183407
rs34183407
ALMS1
2 73454052 missense variant C/T snv 2.1E-05 3.5E-05
CUI: C0428472
Disease: Serum HDL cholesterol measurement
Serum HDL cholesterol measurement 		0.700 1.000 1 2012 2012
dbSNP: rs3783567
rs3783567 		2 112788378 upstream gene variant G/A;T snv
CUI: C0428472
Disease: Serum HDL cholesterol measurement
Serum HDL cholesterol measurement 		0.700 1.000 1 2012 2012
dbSNP: rs4252040
rs4252040
IL1RN
2 113131964 intron variant T/G snv 2.8E-05
CUI: C0428472
Disease: Serum HDL cholesterol measurement
Serum HDL cholesterol measurement 		0.700 1.000 1 2012 2012
dbSNP: rs533617
rs533617
APOB
2 21011100 missense variant T/C snv 3.1E-02 2.9E-02
CUI: C0428472
Disease: Serum HDL cholesterol measurement
Serum HDL cholesterol measurement 		0.700 1.000 1 2012 2012
dbSNP: rs6710896
rs6710896
PLCD4
2 218636156 intron variant T/C snv 3.8E-02
CUI: C0428472
Disease: Serum HDL cholesterol measurement
Serum HDL cholesterol measurement 		0.700 1.000 1 2012 2012