Source: BEFREE

Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs1056744559
rs1056744559
CUI: C0151517
Disease: Complete atrioventricular block
Complete atrioventricular block
0.010 GeneticVariation BEFREE Of the screened polymorphisms, TT genotype of the missense variant TLR5 (rs5744174) (NM_003268.5:c.1846T>C (p.Phe616Leu) is significantly more frequent in the control group than CHB patients (P<0.001), presence of TT genotype of the upstream variant TLR9 (rs5743836) (NM_017442.3:c.-1237T>C) is more frequent in CHB group (P=0.043). 29276096

2018

dbSNP: rs1057317
rs1057317
CUI: C0029456
Disease: Osteoporosis
Osteoporosis
0.010 GeneticVariation BEFREE The regulatory association between rs1057317 polymorphism in TLR4 3'-UTR led to an inhibitory effect on the expression of TLR4 by miR-34a, which may explain the observed association between the polymorphism and the susceptibility to OP. 30989725

2019

dbSNP: rs1057317
rs1057317
CUI: C0699791
Disease: Stomach Carcinoma
Stomach Carcinoma
0.010 GeneticVariation BEFREE The data of this study suggested that the rs1057317 polymorphism in the miR-34a binding site of TLR4 may predict the risk of HP-induced GC. 30242897

2018

dbSNP: rs1057317
rs1057317
Helicobacter pylori (H. pylori) infection in conditions classified elsewhere and of unspecified site
0.010 GeneticVariation BEFREE It was found that, in HP-positive patient, the AA genotype of the rs1057317 polymorphism was closely associated with the risk of GC (95% confidence interval, 1.12 to 2.70; odds ratio, 1.74; P = 0.0129). 30242897

2018

dbSNP: rs1057317
rs1057317
CUI: C0024623
Disease: Malignant neoplasm of stomach
Malignant neoplasm of stomach
0.010 GeneticVariation BEFREE The data of this study suggested that the rs1057317 polymorphism in the miR-34a binding site of TLR4 may predict the risk of HP-induced GC. 30242897

2018

dbSNP: rs1057317
rs1057317
CUI: C2239176
Disease: Liver carcinoma
Liver carcinoma
0.010 GeneticVariation BEFREE Furthermore, the expression of TLR4 was detected in the peripheral blood mononucleated cell of hepatocellular carcinoma (HCC) patients, suggesting that mRNA and protein levels of TLR4 might be associated with SNP rs1057317. 25179842

2014

dbSNP: rs10759932
rs10759932
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary
0.010 GeneticVariation BEFREE Genetic polymorphisms of rs10759932 and rs2737190 in TLR4 are significantly related to both COPD and PTB but with inverse effects. 31640653

2019

dbSNP: rs10759932
rs10759932
CUI: C0032927
Disease: Precancerous Conditions
Precancerous Conditions
0.010 GeneticVariation BEFREE TLR4 rs10759932, but not TLR2 rs3804099 and rs3804100, was associated with risk of premalignant and/or malignant and H. pylori susceptibility. 30301709

2019

dbSNP: rs10759932
rs10759932
CUI: C0948008
Disease: Ischemic stroke
Ischemic stroke
0.010 GeneticVariation BEFREE Moreover, the rs10759932 polymorphism may affect inflammatory response in IS patients. 29075930

2018

dbSNP: rs10759932
rs10759932
CUI: C0034152
Disease: Henoch-Schoenlein Purpura
Henoch-Schoenlein Purpura
0.010 GeneticVariation BEFREE In addition, we observed that a significantly decreased frequency of the haplotype GTC (rs1927914-rs10759932-rs1927907) in HSP patients compared with controls (OR = 0.56; p = 0.028). 28905155

2017

dbSNP: rs10759932
rs10759932
CUI: C0263361
Disease: Psoriasis vulgaris
Psoriasis vulgaris
0.010 GeneticVariation BEFREE The comparison of allele distributions revealed that only one SNP (rs3804099) of 6 common SNPs(rs10759932, rs11536889, rs11536891, rs1927914, rs3804099, rs4696480) was significant associated with the risk of PsV (P<0.01; FDR p-Value). 27155792

2016

dbSNP: rs10759932
rs10759932
CUI: C0699790
Disease: Colon Carcinoma
Colon Carcinoma
0.010 GeneticVariation BEFREE In contrast, the rs2770150 is associated with colon cancer in women aged over 50 years and is closely linked with the decreased levels of female sex hormones during the post-menopausal period (OR = 0.188, CI: 0.074-0.48, P = <0.00084). rs10759932 and rs4986790 appear to have any association with colon cancer. 26771524

2016

dbSNP: rs10759932
rs10759932
CUI: C0007102
Disease: Malignant tumor of colon
Malignant tumor of colon
0.010 GeneticVariation BEFREE In contrast, the rs2770150 is associated with colon cancer in women aged over 50 years and is closely linked with the decreased levels of female sex hormones during the post-menopausal period (OR = 0.188, CI: 0.074-0.48, P = <0.00084). rs10759932 and rs4986790 appear to have any association with colon cancer. 26771524

2016

dbSNP: rs10759932
rs10759932
Diabetes Mellitus, Non-Insulin-Dependent
0.010 GeneticVariation BEFREE In female participants, rs10759932, rs1927911 and rs11536889 were associated with type 2 diabetes (odds ratio 1.176, P = 0.002 for rs10759932, odds ratio 1.136, P = 0.009 for rs1927911, odds ratio 0.882, P = 0.024 for rs11536889). 25104099

2015

dbSNP: rs10759932
rs10759932
CUI: C0009402
Disease: Colorectal Carcinoma
Colorectal Carcinoma
0.010 GeneticVariation BEFREE To evaluate the effect of promoter region polymorphisms of toll-like receptor (TLR)2-196 to -174del and TLR4-1607T/C (rs10759932) on mRNA and protein expression in tumor tissue and of TLR4+896A/G (rs4986790) on colorectal cancer (CRC) risk. 26167073

2015

dbSNP: rs10759932
rs10759932
CUI: C0027651
Disease: Neoplasms
Neoplasms
0.010 GeneticVariation BEFREE To evaluate the effect of promoter region polymorphisms of toll-like receptor (TLR)2-196 to -174del and TLR4-1607T/C (rs10759932) on mRNA and protein expression in tumor tissue and of TLR4+896A/G (rs4986790) on colorectal cancer (CRC) risk. 26167073

2015

dbSNP: rs10759932
rs10759932
CUI: C0940937
Disease: precancerous lesions
precancerous lesions
0.010 GeneticVariation BEFREE TLR4 rs10759932 TC and C carriers were associated with a lower risk in developing precancerous lesions in the stomach in a Chinese Han population. 24269697

2014

dbSNP: rs10759932
rs10759932
CUI: C0085166
Disease: Bacterial Vaginosis
Bacterial Vaginosis
0.010 GeneticVariation BEFREE After adjustment for race, smoking, and bacterial vaginosis, carriage of these alleles was associated with chorionic plate inflammation (maternal rs1554973: odds ratio [OR] 5.2, 95% confidence interval, 3.2-6.4, P = .006; fetal rs10759932: OR 4.95, 95% confidence interval, 3.0-5.6, P = .005). 18928988

2008

dbSNP: rs10759932
rs10759932
CUI: C0600139
Disease: Prostate carcinoma
Prostate carcinoma
0.010 GeneticVariation BEFREE Two single-nucleotide polymorphisms showed nominally statistically significant associations with prostate cancer risk, with the strongest (rs10759932) associated with a 4-fold increased risk of disease (P = 0.006). 17301271

2007

dbSNP: rs10759932
rs10759932
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate
0.010 GeneticVariation BEFREE Two single-nucleotide polymorphisms showed nominally statistically significant associations with prostate cancer risk, with the strongest (rs10759932) associated with a 4-fold increased risk of disease (P = 0.006). 17301271

2007

dbSNP: rs11536878
rs11536878
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis
0.010 GeneticVariation BEFREE There were no associations of TLR4 rs11536878 and rs4986790 SNPs with RA disease activity progression. 25573402

2015

dbSNP: rs11536878
rs11536878
CUI: C0017154
Disease: Gastritis, Atrophic
Gastritis, Atrophic
0.010 GeneticVariation BEFREE The rs11536878 polymorphism was not associated with GC or AG. 25084512

2014

dbSNP: rs11536878
rs11536878
CUI: C0699791
Disease: Stomach Carcinoma
Stomach Carcinoma
0.010 GeneticVariation BEFREE The rs11536878 polymorphism was not associated with GC or AG. 25084512

2014

dbSNP: rs11536878
rs11536878
CUI: C0024623
Disease: Malignant neoplasm of stomach
Malignant neoplasm of stomach
0.010 GeneticVariation BEFREE The rs11536878 polymorphism was not associated with GC or AG. 25084512

2014

dbSNP: rs11536878
rs11536878
Infection caused by Helicobacter pylori
0.010 GeneticVariation BEFREE Using a case-control study, we analyzed the genotypic distribution of TLR4 rs10983755 (-2081G/A) and rs11536878 in a Chinese population and investigated the effect of their interactions with Helicobacter pylori infection on susceptibility to gastric cancer (GC) and atrophic gastritis (AG). 25084512

2014