Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 79923
Gene Symbol: NANOG
NANOG
0.040 GeneticVariation disease BEFREE By introducing a hyperactive variant of herpes simplex virus thymidine kinase gene into the 3'-untranslated region of the endogenous NANOG gene of hESCs through homologous recombination, we developed a safe and highly scalable approach to efficiently eliminate the teratoma risk associated with hESCs without apparent negative impact on their differentiated cell types. 22865887 2012
Entrez Id: 1761
Gene Symbol: DMRT1
DMRT1
0.020 GeneticVariation disease BEFREE Dmrt1 behaves genetically as a dose-sensitive tumor suppressor gene in 129Sv mice, and natural variation in Dmrt1 activity can confer teratoma susceptibility. 20007774 2009
Entrez Id: 1761
Gene Symbol: DMRT1
DMRT1
0.020 GeneticVariation disease BEFREE Finally, we identified a locus on chromosome 9 (rs755383, OR=1.37, P=1.12x10(-23)), containing the sex determination gene DMRT1, which has been linked to teratoma susceptibility in mice. 20543847 2010
Entrez Id: 5728
Gene Symbol: PTEN
PTEN
0.010 GeneticVariation disease BEFREE Analysis of microsatellites D10S551, D10S541 and D10S1765 in GCTs (n=22) showed LOH at the PTEN locus at 10q23 in at least 36% of GCTs (three embryonal carcinoma, three seminoma, two teratoma); one seminoma and one embryonal (9%) carcinoma presented an inactivating mutation in the PTEN gene (2/22). 15674339 2005
Entrez Id: 342977
Gene Symbol: NANOS3
NANOS3
0.010 GeneticVariation disease BEFREE We used a Nanos3-cre knock-in allele to perform conditional gene targeting, testing the GDNF coreceptors Gfra1 and Ret for effects on teratoma susceptibility. 23473982 2013
Entrez Id: 57819
Gene Symbol: LSM2
LSM2
0.010 GeneticVariation disease BEFREE Screening of a human teratoma cDNA library with a partial cDNA for a human autoimmune antigen resulted in the isolation of a cDNA clone containing the entire coding region of this snRNP core protein. 2974536 1988
Entrez Id: 10524
Gene Symbol: KAT5
KAT5
0.010 GeneticVariation disease BEFREE Our data suggest that approximately half of the patient with cisplatin-refractory or relapsed GCT salvaged with TIP or TICE chemotherapy and evidence of residual disease are at risk of harboring either viable GCT or teratoma. 30296502 2019
Entrez Id: 261726
Gene Symbol: TIPRL
TIPRL
0.010 GeneticVariation disease BEFREE Our data suggest that approximately half of the patient with cisplatin-refractory or relapsed GCT salvaged with TIP or TICE chemotherapy and evidence of residual disease are at risk of harboring either viable GCT or teratoma. 30296502 2019
Entrez Id: 2950
Gene Symbol: GSTP1
GSTP1
0.010 GeneticVariation disease BEFREE The combined genotype GSTT1positive/GSTP1AA/GSTM1positive was associated with decreased risk of development of pure embryonal carcinoma (P = 0.009, OR: 0.309, 95% CI: 0.122-0.784) and the GSTP1-A-allele (i.e. genotypes GSTP-AA or GSTP-AG) was also associated with decreased risk for development of pure teratoma (P = 0.032, OR: 0.326, 95% CI: 0.122-0.873). 19741569 2009
Entrez Id: 79828
Gene Symbol: METTL8
METTL8
0.010 GeneticVariation disease BEFREE Our data suggest that approximately half of the patient with cisplatin-refractory or relapsed GCT salvaged with TIP or TICE chemotherapy and evidence of residual disease are at risk of harboring either viable GCT or teratoma. 30296502 2019
Entrez Id: 55636
Gene Symbol: CHD7
CHD7
0.010 GeneticVariation disease BEFREE We hypothesize that a germline mutation in CHD7 or other similar regulatory gene causative of CHARGE syndrome and craniofacial developmental abnormalities may have contributed to the unusual location of the teratoma in this case. 31797071 2020
Entrez Id: 81533
Gene Symbol: ITFG1
ITFG1
0.010 GeneticVariation disease BEFREE Our data suggest that approximately half of the patient with cisplatin-refractory or relapsed GCT salvaged with TIP or TICE chemotherapy and evidence of residual disease are at risk of harboring either viable GCT or teratoma. 30296502 2019
Entrez Id: 4810
Gene Symbol: NHS
NHS
0.010 GeneticVariation disease BEFREE All cases of pure teratoma in postpubertal men assessed at Barts Health NHS Trust or in consultation since the introduction of routine investigation of chromosome 12p status in 2010 were reviewed. 31695156 2019
Entrez Id: 23184
Gene Symbol: MESD
MESD
0.010 GeneticVariation disease BEFREE Fusion of the SUMO/Sentrin-specific protease 1 gene SENP1 and the embryonic polarity-related mesoderm development gene MESDC2 in a patient with an infantile teratoma and a constitutional t(12;15)(q13;q25). 15917269 2005
Entrez Id: 2668
Gene Symbol: GDNF
GDNF
0.010 GeneticVariation disease BEFREE We used a Nanos3-cre knock-in allele to perform conditional gene targeting, testing the GDNF coreceptors Gfra1 and Ret for effects on teratoma susceptibility. 23473982 2013
Entrez Id: 2674
Gene Symbol: GFRA1
GFRA1
0.010 GeneticVariation disease BEFREE Despite some variability in genetic background in these crosses, this result is consistent with previous genetic mapping of teratoma susceptibility loci to the region containing Gfra1. 23473982 2013
Entrez Id: 3845
Gene Symbol: KRAS
KRAS
0.010 GeneticVariation disease BEFREE Additionally, the identification of KRAS mutation in the morphologically benign intestinal-type epithelium indicated that it is an early event in the carcinogenic sequence and that the molecular pathway of carcinogenesis in teratoma is similar to that in the carcinogenic process of somatic tissue. 24422958 2013
Entrez Id: 190
Gene Symbol: NR0B1
NR0B1
0.010 GeneticVariation disease BEFREE Two sisters phenotypically normal females, presenting with tumor abdominal mass with histopathological findings of teratoma and gonadoblastoma associated to 46,XY male-to-female sex reversal syndrome, secondary to a duplication in DAX-1, possibly inherited of maternal gonadal mosaicism. 30879272 2019
Entrez Id: 367
Gene Symbol: AR
AR
0.010 GeneticVariation disease BEFREE A discrepancy was detected between carcinoma and teratoma in one pair at several loci, with different X-chromosome inactivation patterns revealed by the HUMARA clonality assay. 26355245 2015
Entrez Id: 999
Gene Symbol: CDH1
CDH1
0.010 GeneticVariation disease BEFREE A case of germinoma of the central nervous system and a case of spinal channel teratoma were tested for loss of heterozygosity (LOH) of E-cadherin gene by PCR amplification of tetranucleotide polymorphism (D16S752). 18158575 2007
Entrez Id: 28471
Gene Symbol: IGHV1-12
IGHV1-12
0.040 Biomarker disease BEFREE A detailed karyotype analysis using fluorescence in situ hybridization (FISH), with 24 chromosome-specific paint probes has been carried out on newly established cell lines from two testicular tumors, an i(12p)-positive teratoma, and an i(12p)-negative combined seminoma/teratoma. 8536234 1995
Entrez Id: 28471
Gene Symbol: IGHV1-12
IGHV1-12
0.040 Biomarker disease BEFREE Clonal relationship between the teratoma and rhabdomyosarcoma of the germ cell tumor was established by the presence in both of i(12p), the characteristic marker of germ cell tumors. 1676906 1991
Entrez Id: 1822
Gene Symbol: ATN1
ATN1
0.040 Biomarker disease BEFREE The RPE65-hiPSCs presented typical morphological features with normal karyotype, expressed pluripotency markers, and developed teratoma in NOD-SCID mice. 31572124 2019
Entrez Id: 1822
Gene Symbol: ATN1
ATN1
0.040 Biomarker disease BEFREE We hypothesized that iPS cells, injected into NOD.Cg-Prkdc(scid) Il2rg(tm1Wjl)/SzJ immunocompromised (NSG) mice could give rise to hematopoietic stem/progenitor cells (HSPCs) during teratoma formation. 23212524 2013
Entrez Id: 28471
Gene Symbol: IGHV1-12
IGHV1-12
0.040 Biomarker disease BEFREE FISH identification of i(12p) and/or 12p overrepresentation in routinely processed surgical specimens is a useful ancillary diagnostic tool in distinguishing testicular epidermoid cysts from teratoma. 17020968 2006