Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs762292600
rs762292600
0.020 GeneticVariation BEFREE AKT1 mutations (E17K) have been found in 1.4-8% of breast cancer patients. 29086897

2018

dbSNP: rs1062577
rs1062577
0.020 GeneticVariation BEFREE rs1062577 A allele is significantly and dramatically associated with the elevated risk and greater stages of breast cancer. 28216037

2017

dbSNP: rs10484919
rs10484919
0.020 GeneticVariation BEFREE After adjusting for age, body mass index, parity, and menopausal status, we found that in our cohort of 865 Malaysian Chinese, three SNPs in the 6q25.1 region near ESR1 (rs2046210, rs12173570, and rs10484919) that were associated with mammographic density, breast cancer risk, or breast size in previous GWAS were significantly associated with both percentage density and absolute dense area. 26677210

2016

dbSNP: rs1062577
rs1062577
0.020 GeneticVariation BEFREE These results showed that the ESR1 rs1062577 polymorphism increased breast cancer risk in Han Chinese women, which might be used as a new SNP marker. 26850117

2016

dbSNP: rs762292600
rs762292600
0.020 GeneticVariation BEFREE Analysis of TCGA breast cancer data revealed that the mRNA expression, total protein levels, and phosphorylation of various RTKs are decreased in human tumors harboring AKT1(E17K). 27004402

2016

dbSNP: rs757200716
rs757200716
0.020 GeneticVariation BEFREE LOX mRNA expression was significantly elevated in tumours of patients older than 55 years, postmenopausal patients, estrogen receptor positive tumours, and p53 negative tumours, but was unaffected by G473A genotype in tumours and breast cancer cell lines. 25141126

2014

dbSNP: rs10484919
rs10484919
0.020 GeneticVariation BEFREE After conditional regression and linkage disequilibrium analyses, rs6929137 and rs10484919 tend to be susceptible markers of breast cancer</span> in this region and both of them were located at sites of histone modification according to the UCSC (http://genome.ucsc.edu/) genome database. 21528353

2011

dbSNP: rs757200716
rs757200716
0.020 GeneticVariation BEFREE We found a significant difference in the frequency of the LOX G473A genotype between the breast cancer and control groups. 20929399

2011

dbSNP: rs1462893414
rs1462893414
0.020 GeneticVariation BEFREE ESR1 A908G mutation-positive breast cancer was significantly associated with a first-degree family history of breast cancer (odds ratio [OR] = 2.69, 95% confidence interval [CI] = 1.15 to 6.28), whereas mutation-negative breast cancer was not. 17553133

2007

dbSNP: rs1462893414
rs1462893414
0.020 GeneticVariation BEFREE This population-based study, the largest so far to screen for the ER-alpha A908G mutation in breast cancer, confirms the presence of the mutant in invasive breast tumors. 16280033

2005

dbSNP: rs200075329
rs200075329
0.010 GeneticVariation BEFREE This study suggests that the ER S118P variant does not affect risk for breast cancer or hormone therapy resistance. 30560461

2019

dbSNP: rs3778609
rs3778609
0.010 GeneticVariation BEFREE These SNPs were in high LD (r<sup>2</sup> > 0.9) with each other, with the top SNP, rs3778609, associated with breast cancer with an odds ratio (OR) and 95% confidence interval (95% CI) of 0.76 (0.70-0.84). 30642363

2019

dbSNP: rs760503206
rs760503206
0.010 GeneticVariation BEFREE Surveying a small set of CAFs from breast cancer</span> biopsies, we found that a relatively common single nucleotide polymorphism, which results in the expression of a GPER variant with the amino acid substitution P16L, is associated with the nuclear localization of GPER. 28596490

2017

dbSNP: rs1459132456
rs1459132456
0.010 GeneticVariation BEFREE To evaluate the role of this polymorphism as a risk factor for breast cancer in Kurdish patients and to investigate the possible association between Arg194Trp x-ray repair cross-complementing group 1 (XRCC1) gene polymorphisms with clinical and histopathological outcomes of patients with breast cancer. 27279507

2016

dbSNP: rs523736
rs523736
0.010 GeneticVariation BEFREE For overall breast cancer risk, three single-nucleotide polymorphisms (SNPs) in miRNA biogenesis genes DROSHA rs78393591 (OR = 0.69, 95 % CI: 0.55-0.88, P = 0.003), ESR1 rs523736 (OR = 0.88, 95 % CI: 0.82-0.95, P = 3.99 × 10(-4)), and ZCCHC11 rs114101502 (OR = 1.33, 95 % CI: 1.11-1.59, P = 0.002), and one SNP in primary miRNA sequence (rs116159732 in miR-6826, OR = 0.74, 95 % CI: 0.63-0.89, P = 0.001) were found to have significant associations in both discovery and validation phases. 27380242

2016

dbSNP: rs9479118
rs9479118
0.010 GeneticVariation BEFREE In the > 13-year-old group, the AA genotype at rs1062577, the GG genotype at rs2881766, and the CC genotype at rs9479118 increased breast cancer susceptibility. 26850117

2016

dbSNP: rs2273206
rs2273206
0.010 GeneticVariation BEFREE ESR1, rs2881766, rs2077647, rs926778, and rs2273206 polymorphisms increased breast cancer risk, and rs3798377 decreased the risk in overall patients. 25323936

2015

dbSNP: rs926778
rs926778
0.010 GeneticVariation BEFREE For the tumor subtypes, rs2881766 increased breast cancer risk manly in luminal A, HER2-overexpressing, and triple-negative subtypes except for luminal B subtype, and rs926778 increased the risk in luminal A and triple-negative subtypes. 25323936

2015

dbSNP: rs1207112399
rs1207112399
0.010 GeneticVariation BEFREE The G473A polymorphism (rs1800449) results in the Arg158Gln amino acid substitution in the LOX propeptide, compromises its tumour suppressive activity, and was associated with an increased breast cancer risk in a Chinese Han population. 25141126

2014

dbSNP: rs12525163
rs12525163
0.010 GeneticVariation BEFREE Further, two SNPs independent of previously reported signals in ESR1 [rs12525163 odds ratio (OR) = 1.15, P = 4.9 × 10(-) (4)] and 19p13.1 (rs1864112 OR = 0.84, P = 1.8 × 10(-) (9)) were associated with TN breast cancer. 24325915

2014

dbSNP: rs3798758
rs3798758
0.010 GeneticVariation BEFREE Breast cancer risk was significantly associated with three SNPs located at 6q25.1-rs9383935 in CCDC170 and rs2228480 and rs3798758 in ESR1-with variant allele attributed odds ratios (ORs) of 1.38 (95% confidence interval (CI): 1.20 to 1.57, P=2.21×10(-6)), 0.84 (95% CI: 0.72 to 0.98, P=0.025) and 1.19 (95% CI: 1.04 to 1.37, P=0.013), respectively. 25116933

2014

dbSNP: rs2747648
rs2747648
0.010 GeneticVariation BEFREE The aim of the study was to analyze the impact of the rs2747648 genetic variant in the estrogen receptor alpha (ER1) gene affecting a putative miR-453-binding site on the risk of breast cancer in postmenopausal women. 22012767

2012

dbSNP: rs747099645
rs747099645
0.010 GeneticVariation BEFREE A DNA bank of patients with gynecologic oncology, patients with breast cancer (n = 335), and healthy women (n = 530) was created, and the following single-nucleotide polymorphisms were examined: CYP1A1 M1 polymorphism, that is, T264-C transition in the 30-noncoding region; CYP1A2*1F polymorphism, that is, C734-A transversion in the CYP1A2 gene; C-T transition (Arg264Cys) in exon 7 of CYP19; and SULT1A1*2 polymorphism, that is, G638-A transition (Arg213His) in the SULT1A1 gene. 21977969

2012

dbSNP: rs7766585
rs7766585
0.010 GeneticVariation BEFREE Potential association to breast cancer was identified for 15 SNPs and one of these SNPs (rs7766585 in ESR1) was found to associate strongly with breast cancer, OR 1.30 (95% CI 1.17-1.45; p-value 2.1 × 10(-6)), when tested in a verification panel consisting of 3,211 unique breast cancer cases and 4,223 unique controls from five European biobank cohorts. 21105050

2011

dbSNP: rs1455751791
rs1455751791
0.010 GeneticVariation BEFREE Our data suggest that ER-beta polymorphism in exon 7 codon 392 (C1176G) is correlated with various aspects of breast cancer and lymph node metastasis in our group of patients. 20604969

2010