Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs1799750
rs1799750
0.020 GeneticVariation BEFREE <b>Conclusion.</b> We systematically investigated the association between MMP-1-1607 (rs1799750) 1G/2G polymorphism and OA susceptibility; however, the results show no correlation. 30886066

2019

dbSNP: rs143383
rs143383
0.100 GeneticVariation BEFREE As GDF5 codes for a cartilage anabolic protein, this reduced expression may explain why the T-allele of rs143383 is an OA risk factor. 22929025

2013

dbSNP: rs143383
rs143383
0.100 GeneticVariation BEFREE rs143383 and three highly correlated single nucleotide polymorphisms (SNPs) in the GDF5 region were found to be independently associated with OA, height, bone size and fracture risk in women. 19029166

2009

dbSNP: rs61752717
rs61752717
0.010 GeneticVariation BEFREE M694V was the most frequent mutation (5%) in the osteoarthritis group, whereas in the control group, E148Q was the most common (16%). 24009456

2013

dbSNP: rs1143627
rs1143627
0.010 GeneticVariation BEFREE A 3-single-nucleotide polymorphism (SNP) IL1B-IL1RN haplotype rs1143627-rs16944-rs419598 showed a trend toward hand OA association (posterior probability of association 0.72) with the most prominent feature being protection from a specific haplotype representing a partial mirror image of the extended risk haplotype (OR estimated at 0.46). 19733643

2010

dbSNP: rs16944
rs16944
0.020 GeneticVariation BEFREE A 3-single-nucleotide polymorphism (SNP) IL1B-IL1RN haplotype rs1143627-rs16944-rs419598 showed a trend toward hand OA association (posterior probability of association 0.72) with the most prominent feature being protection from a specific haplotype representing a partial mirror image of the extended risk haplotype (OR estimated at 0.46). 19733643

2010

dbSNP: rs419598
rs419598
0.010 GeneticVariation BEFREE A 3-single-nucleotide polymorphism (SNP) IL1B-IL1RN haplotype rs1143627-rs16944-rs419598 showed a trend toward hand OA association (posterior probability of association 0.72) with the most prominent feature being protection from a specific haplotype representing a partial mirror image of the extended risk haplotype (OR estimated at 0.46). 19733643

2010

dbSNP: rs143383
rs143383
0.100 GeneticVariation BEFREE A compelling genetic association with osteoarthritis (OA) of a functional SNP (rs143383, T/C) in the 5'-UTR of the GDF5 gene was recently reported in case-control cohorts from Japan and China. 17616513

2007

dbSNP: rs143383
rs143383
0.100 GeneticVariation BEFREE A functional single nucleotide polymorphism (SNP) +104T/C in the 5'-UTR of GDF5 (rs143383) was reported to be associated with osteoarthritis susceptibility in Han Chinese and Japanese populations. 28886316

2017

dbSNP: rs143383
rs143383
0.100 GeneticVariation BEFREE A functional single nucleotide polymorphism (SNP) in the 5'-untranslated region of GDF5 (rs143383) was reported to be associated with osteoarthritis susceptibility. 18947434

2008

dbSNP: rs11965969
rs11965969
0.010 GeneticVariation BEFREE A genetic association between the COL10A1 rs11965969 polymorphism and OA was also found. 20498197

2010

dbSNP: rs143383
rs143383
0.100 GeneticVariation BEFREE A genetic deficit mediated by SNP rs143383 that leads to reduced expression of GDF5 is strongly associated with large-joint osteoarthritis. 24466161

2014

dbSNP: rs12901404
rs12901404
0.700 GeneticVariation GWASDB A genome-wide association study suggests that a locus within the ataxin 2 binding protein 1 gene is associated with hand osteoarthritis: the Treat-OA consortium. 19508968

2009

dbSNP: rs6094710
rs6094710
A 0.720 GeneticVariation GWASCAT A meta-analysis of genome-wide association studies identifies novel variants associated with osteoarthritis of the hip. 23989986

2014

dbSNP: rs3757837
rs3757837
C 0.700 GeneticVariation GWASCAT A meta-analysis of genome-wide association studies identifies novel variants associated with osteoarthritis of the hip. 23989986

2014

dbSNP: rs41310883
rs41310883
0.010 GeneticVariation BEFREE A nonsynonymous single nucleotide variant rs41310883 (c.524C>T, p.Thr175Met) in TUFT1 gene was found to co-segregate perfectly with MTP I OA. 28410428

2017

dbSNP: rs3830675
rs3830675
0.010 GeneticVariation BEFREE A strong positive correlation was found between PTEN rs3830675 polymorphism and OA risk, and this SNP was more frequent in the smokers and drinkers groups. 31704287

2019

dbSNP: rs10172410
rs10172410
0.700 GeneticVariation GWASDB A variant in MCF2L is associated with osteoarthritis. 21871595

2011

dbSNP: rs62174901
rs62174901
0.700 GeneticVariation GWASDB A variant in MCF2L is associated with osteoarthritis. 21871595

2011

dbSNP: rs62174906
rs62174906
0.700 GeneticVariation GWASDB A variant in MCF2L is associated with osteoarthritis. 21871595

2011

dbSNP: rs1676486
rs1676486
0.010 GeneticVariation BEFREE AEI at rs1676486 is a risk factor for LDH, but not for OA. 23497244

2013

dbSNP: rs769389061
rs769389061
0.010 GeneticVariation BEFREE Aim of the current study was to estimate the link of resistin gene polymorphisms (- 420 C>G, + 299 G>A) with genetic susceptibility of knee OA in a Pakistani population. 30903575

2019

dbSNP: rs768876280
rs768876280
0.010 GeneticVariation BEFREE Aiming to delineate novel neuro-immune mechanisms for NGF/TrkA signalling in osteoarthritis (OA) pain, we evaluated inflammatory changes in the knee joints following injection of monoiodoacetate (MIA) in mice carrying a TrkA receptor mutation (P782S; TrkA KI mice). 28844566

2018

dbSNP: rs3743930
rs3743930
0.010 GeneticVariation BEFREE Although the number of patients studied was insufficient to claim that E148Q gene mutation protects against osteoarthritis, the potential of this gene merits further investigation. 24009456

2013

dbSNP: rs288326
rs288326
0.030 GeneticVariation BEFREE An association analysis of 2 variants (R200W and R324G) of FRZB was performed in a random sample of 1,369 subjects (ages 55-70 years) from a population-based cohort (the Rotterdam Study) scored for radiographic characteristics of OA in the hip, hand, spine, and knee and in a patient population of Caucasian probands (ages 40-70 years) and their siblings selected for the presence of primary symptomatic OA at multiple sites. 15818669

2005