Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs28934571
rs28934571
0.800 GeneticVariation BEFREE HCC often harbors a TP53 (tumor protein p53) mutation at codon 249 (R249S). 21768053

2011

dbSNP: rs28934571
rs28934571
0.800 GeneticVariation BEFREE R249S mutation was detected in 6.2% and 3.4% of the HCC and non-HCC groups, respectively, which was not significantly different. 23886144

2013

dbSNP: rs28934571
rs28934571
0.800 GeneticVariation BEFREE A mutation in the tumor suppressor p53 gene resulting in an Arg-->Ser substitution in position 249 is found frequently in human hepatocellular carcinomas associated with hepatitis B infection and with aflatoxin exposure. 7605578

1995

dbSNP: rs28934571
rs28934571
0.800 GeneticVariation BEFREE A selective mutation in TP53 (AGG-->AGT at codon 249, Arg-->Ser) has been identified as a hotspot in HCCs from such areas, reflecting DNA damage caused by aflatoxin metabolites. 15095302

2004

dbSNP: rs754332870
rs754332870
0.010 GeneticVariation BEFREE Analysis of the KRAS gene showed only a G12C variation in one large cell carcinoma (LCC) patient, whereas variants were not found in adenocarcinoma (ADC) and squamous cell carcinoma (SCC) cases. 30048458

2018

dbSNP: rs1042522
rs1042522
0.100 GeneticVariation BEFREE CG and GG genotypes in rs1042522 and heterozygote and homozygote in rs2279744 were significantly associated with an elevated risk of HCC. 25412941

2014

dbSNP: rs28934571
rs28934571
0.800 GeneticVariation BEFREE Co-targeting p53-R249S and CDK4 synergistically suppresses survival of hepatocellular carcinoma cells. 31747859

2020

dbSNP: rs1457582183
rs1457582183
0.010 GeneticVariation BEFREE Complete sequence analysis of these samples demonstrated a missense mutation in exon 5 (K144I) and exon 7 (V255A) from HCC samples B6-21 and B6-2, respectively. 10340391

1999

dbSNP: rs28934571
rs28934571
0.800 GeneticVariation BEFREE Droplet digital PCR detects high rate of TP53 R249S mutants in cell-free DNA of middle African patients with hepatocellular carcinoma. 29749584

2018

dbSNP: rs121912656
rs121912656
0.710 GeneticVariation BEFREE Furthermore, p53(G245D) was shown to have a similar pattern of subcellular localization to ZBP-89 in tissues of HCC patients in Hong Kong. 22214764

2012

dbSNP: rs28934571
rs28934571
0.800 GeneticVariation BEFREE Furthermore, TP53 mutations were associated with shorter survival only in HBV-related HCC (p=0.02) whereas R249S mutations were identified exclusively in migrants. 25021421

2015

dbSNP: rs28934571
rs28934571
0.800 GeneticVariation BEFREE Here we report a unique mechanism underlying the GOF of p53-R249S (p53-RS), a p53 mutant frequently detected in human hepatocellular carcinoma (HCC) that is highly related to hepatitis B infection and aflatoxin B1. 29225033

2017

dbSNP: rs28934571
rs28934571
0.800 GeneticVariation BEFREE Here, we summarize the mechanisms of R249S formation and the possible role of p.R249S protein in HCC pathogenesis. 19376640

2009

dbSNP: rs1042522
rs1042522
0.100 GeneticVariation BEFREE Homozygosity for Pro of p53 Arg72Pro is potentially one of the genetic risk factors for HCC in Chinese population. 15633234

2005

dbSNP: rs1131691014
rs1131691014
0.100 GeneticVariation BEFREE Homozygosity for Pro of p53 Arg72Pro is potentially one of the genetic risk factors for HCC in Chinese population. 15633234

2005

dbSNP: rs878854066
rs878854066
0.100 GeneticVariation BEFREE Homozygosity for Pro of p53 Arg72Pro is potentially one of the genetic risk factors for HCC in Chinese population. 15633234

2005

dbSNP: rs1042522
rs1042522
0.100 GeneticVariation BEFREE However, we did not find any main effect of TP53 Arg72Pro on HCC risk in this population. 20309940

2011

dbSNP: rs1131691014
rs1131691014
0.100 GeneticVariation BEFREE However, we did not find any main effect of TP53 Arg72Pro on HCC risk in this population. 20309940

2011

dbSNP: rs878854066
rs878854066
0.100 GeneticVariation BEFREE However, we did not find any main effect of TP53 Arg72Pro on HCC risk in this population. 20309940

2011

dbSNP: rs28934578
rs28934578
0.710 GeneticVariation BEFREE In addition, exogenous Δ40p53 expression significantly suppressed cell growth in HCC cells with wild-type TP53, and in those that were mutant or null for TP53 Notably, Δ40p53α-induced tumor suppressor activity was markedly attenuated in cells expressing the hot-spot mutant Δ40p53α-R175H, which lacks the transcription factor activity of p53. 27980070

2017

dbSNP: rs1042522
rs1042522
0.100 GeneticVariation BEFREE In addition, our findings further suggest that the combination of MDM2 SNP 309 and TP53 Arg72Pro genotypes confers higher risk to develop HCC. 24376578

2013

dbSNP: rs1131691014
rs1131691014
0.100 GeneticVariation BEFREE In addition, our findings further suggest that the combination of MDM2 SNP 309 and TP53 Arg72Pro genotypes confers higher risk to develop HCC. 24376578

2013

dbSNP: rs878854066
rs878854066
0.100 GeneticVariation BEFREE In addition, our findings further suggest that the combination of MDM2 SNP 309 and TP53 Arg72Pro genotypes confers higher risk to develop HCC. 24376578

2013

dbSNP: rs779196500
rs779196500
0.010 GeneticVariation BEFREE In addition, we found that the L104P mutation in the VCX gene (Variable charge, X-linked) was absent in white blood cell samples, but present at 11.1% frequency in the adjacent tissues and increased to 14.6% in HCC tissues, suggesting that this mutation might be a tumor driver gene driving HCC carcinogenesis. 28412734

2017

dbSNP: rs1064793929
rs1064793929
0.010 GeneticVariation BEFREE In contrast, the β-catenin mutation was associ</span>ated with better prognosis in both S100P-positive and -negative HCC</span>s. 23785431

2013