Disease: High density lipoprotein measurement
Source: GWASCAT ×
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs4420638
APOC1
0.708 0.520 19 44919689 downstream gene variant A/G snv 0.18 30
rs429358
APOE
0.590 0.600 19 44908684 missense variant T/C snv 0.14 0.16 26
rs7412
APOE
0.641 0.640 19 44908822 missense variant C/T snv 6.2E-02 7.9E-02 20
rs4803750
BCL3
0.807 0.240 19 44744370 upstream gene variant A/G snv 7.7E-02 19
rs2740488
ABCA1
0.827 0.120 9 104899461 intron variant A/C snv 0.29 9
rs769449
APOE
0.882 0.120 19 44906745 non coding transcript exon variant G/A snv 8.4E-02 8
rs56131196
APOC1
0.925 0.160 19 44919589 downstream gene variant G/A snv 0.18 6
rs2678379
APOB
1.000 0.080 2 21003688 intron variant A/G snv 0.76 5
rs10402271 1.000 0.080 19 44825957 downstream gene variant T/G snv 0.28 4
rs157580
TOMM40
0.882 0.160 19 44892009 intron variant G/A snv 0.69 4
rs261291
ALDH1A2
1.000 0.080 15 58387979 intron variant T/A;C snv 4
rs157595 1.000 0.080 19 44922203 upstream gene variant A/G;T snv 3
rs41290120
NECTIN2
1.000 0.080 19 44879418 intron variant G/A;T snv 3
rs439401 0.851 0.200 19 44911194 non coding transcript exon variant T/C snv 0.68 3
rs759819 1.000 0.080 19 54304302 intron variant C/G;T snv 3
rs10401176
BCL3
1.000 0.080 19 44750234 intron variant C/G;T snv 0.17 2
rs10426401
LOC107985305 ; PVR
1.000 0.080 19 44644419 intron variant T/G snv 0.32 2
rs10792832 1.000 0.080 11 86156833 downstream gene variant A/G snv 0.70 2
rs10808026
EPHA1
1.000 0.080 7 143402040 intron variant C/A snv 0.19 2
rs12148780
ALDH1A2
1.000 0.080 15 58289090 intron variant A/G snv 0.14 2
rs141622900 1.000 0.080 19 44923535 upstream gene variant G/A snv 5.9E-02 2
rs35816125
LIPG
1.000 0.080 18 49562460 intron variant C/G snv 0.25 2
rs406315
NECTIN2
1.000 0.080 19 44880859 intron variant G/A;C snv 2
rs519113
NECTIN2
1.000 0.080 19 44873027 intron variant C/G;T snv 2
rs5754166
UBE2L3
0.925 0.160 22 21576488 intron variant C/T snv 0.18 2