Disease: Serum LDL cholesterol measurement
Source: GWASDB ×
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs10401969
SUGP1
0.776 0.240 19 19296909 intron variant T/C snv 0.10 6
rs10455872
LPA
0.662 0.320 6 160589086 intron variant A/G snv 4.3E-02 6
rs11206510 0.763 0.240 1 55030366 intergenic variant T/A;C;G snv 7
rs1122608
SMARCA4
0.763 0.120 19 11052925 intron variant G/T snv 0.18 7
rs11591147
PCSK9
0.677 0.360 1 55039974 missense variant G/A;T snv 1.2E-02 4
rs11668477 0.925 0.080 19 11084354 downstream gene variant A/G snv 0.34 6
rs12654264
HMGCR
0.925 0.120 5 75352778 intron variant A/T snv 0.38 5
rs12670798
DNAH11 ; LOC105375183
1.000 0.040 7 21567734 intron variant T/C snv 0.26 4
rs12740374
CELSR2
0.851 0.040 1 109274968 3 prime UTR variant G/T snv 0.22 8
rs1501908 1.000 0.040 5 156971158 intergenic variant G/A;C;T snv 3
rs157580
TOMM40
0.882 0.160 19 44892009 intron variant G/A snv 0.69 11
rs16996148 0.882 0.120 19 19547663 downstream gene variant G/T snv 0.10 5
rs17321515 0.776 0.200 8 125474167 intron variant A/G snv 0.49 7
rs174546
FADS1 ; FADS2
0.807 0.200 11 61802358 3 prime UTR variant C/T snv 0.28 9
rs174570
FADS2
0.882 0.200 11 61829740 intron variant C/T snv 0.15 10
rs2075650
TOMM40
0.662 0.360 19 44892362 intron variant A/G snv 0.13 0.13 20
rs2228671
LDLR
0.790 0.160 19 11100236 stop gained C/A;G;T snv 1.6E-05; 8.9E-02 6
rs2254287
COL11A2
1.000 0.040 6 33176171 intron variant C/A;G;T snv 3
rs2650000
HNF1A-AS1
0.851 0.200 12 120951159 intron variant A/C snv 0.70 7
rs3184504
SH2B3 ; ATXN2
0.572 0.600 12 111446804 missense variant T/A;C;G snv 0.67 24
rs3764261 0.732 0.280 16 56959412 upstream gene variant C/A snv 0.31 11
rs3798220
LPA
0.732 0.160 6 160540105 missense variant T/C snv 5.6E-02 3.1E-02 4
rs3846662
HMGCR
0.763 0.280 5 75355259 non coding transcript exon variant A/G snv 0.50 0.58 5
rs3846663
HMGCR ; CERT1
0.882 0.120 5 75359901 intron variant C/T snv 0.35 4
rs4420638
APOC1
0.708 0.520 19 44919689 downstream gene variant A/G snv 0.18 15