Disease: Serum total cholesterol measurement
Source: GWASDB ×
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs10455872
LPA
0.662 0.320 6 160589086 intron variant A/G snv 4.3E-02 6
rs12678919 0.882 0.080 8 19986711 intergenic variant A/G snv 1.0E-01 7
rs17321515 0.776 0.200 8 125474167 intron variant A/G snv 0.49 7
rs2075650
TOMM40
0.662 0.360 19 44892362 intron variant A/G snv 0.13 0.13 20
rs3846662
HMGCR
0.763 0.280 5 75355259 non coding transcript exon variant A/G snv 0.50 0.58 5
rs4420638
APOC1
0.708 0.520 19 44919689 downstream gene variant A/G snv 0.18 15
rs562338 0.807 0.160 2 21065449 intergenic variant A/G snv 0.69 6
rs9989419 0.882 0.120 16 56951227 regulatory region variant A/G snv 0.55 8
rs1532085
ALDH1A2
0.882 0.080 15 58391167 intron variant A/G;T snv 9
rs2156552
LOC105372112
1.000 0.040 18 49655298 downstream gene variant A/G;T snv 4
rs12654264
HMGCR
0.925 0.120 5 75352778 intron variant A/T snv 0.38 5
rs10503669 0.925 0.080 8 19990179 intergenic variant C/A snv 8.4E-02 7
rs12272004 1.000 0.040 11 116733008 TF binding site variant C/A snv 9.8E-02 3
rs1532624
CETP
0.851 0.160 16 56971567 intron variant C/A snv 0.34 7
rs3764261 0.732 0.280 16 56959412 upstream gene variant C/A snv 0.31 11
rs1800775
CETP
0.790 0.240 16 56961324 upstream gene variant C/A;G snv 0.51; 5.7E-06 7
rs2228671
LDLR
0.790 0.160 19 11100236 stop gained C/A;G;T snv 1.6E-05; 8.9E-02 6
rs328
LPL
0.732 0.440 8 19962213 stop gained C/G snv 9.2E-02 9.0E-02 7
rs1800588
ALDH1A2 ; LIPC
0.790 0.200 15 58431476 intron variant C/G;T snv 0.30 6
rs174546
FADS1 ; FADS2
0.807 0.200 11 61802358 3 prime UTR variant C/T snv 0.28 9
rs174570
FADS2
0.882 0.200 11 61829740 intron variant C/T snv 0.15 10
rs1800961
HNF4A
0.851 0.160 20 44413724 missense variant C/T snv 3.1E-02 2.5E-02 5
rs1883025
ABCA1
0.807 0.120 9 104902020 intron variant C/T snv 0.28 7
rs4149268
ABCA1
1.000 0.040 9 104884939 intron variant C/T snv 0.46 4
rs579459 0.752 0.320 9 133278724 upstream gene variant C/T snv 0.81 17