Disease: Serum total cholesterol measurement
Source: GWASDB ×
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1800775
CETP
0.790 0.240 16 56961324 upstream gene variant C/A;G snv 0.51; 5.7E-06 7
rs1883025
ABCA1
0.807 0.120 9 104902020 intron variant C/T snv 0.28 7
rs328
LPL
0.732 0.440 8 19962213 stop gained C/G snv 9.2E-02 9.0E-02 7
rs4775041
ALDH1A2
1.000 0.040 15 58382496 intron variant G/C snv 0.24 7
rs6589566
ZPR1
0.882 0.080 11 116781707 intron variant G/A;C;T snv 7
rs693
APOB
0.708 0.440 2 21009323 synonymous variant G/A snv 0.39 0.38 7
rs10401969
SUGP1
0.776 0.240 19 19296909 intron variant T/C snv 0.10 6
rs10455872
LPA
0.662 0.320 6 160589086 intron variant A/G snv 4.3E-02 6
rs1800588
ALDH1A2 ; LIPC
0.790 0.200 15 58431476 intron variant C/G;T snv 0.30 6
rs2228671
LDLR
0.790 0.160 19 11100236 stop gained C/A;G;T snv 1.6E-05; 8.9E-02 6
rs515135 0.807 0.160 2 21063185 intergenic variant T/C snv 0.73 6
rs562338 0.807 0.160 2 21065449 intergenic variant A/G snv 0.69 6
rs12654264
HMGCR
0.925 0.120 5 75352778 intron variant A/T snv 0.38 5
rs16996148 0.882 0.120 19 19547663 downstream gene variant G/T snv 0.10 5
rs1800961
HNF4A
0.851 0.160 20 44413724 missense variant C/T snv 3.1E-02 2.5E-02 5
rs3846662
HMGCR
0.763 0.280 5 75355259 non coding transcript exon variant A/G snv 0.50 0.58 5
rs6544713
ABCG8
0.925 0.040 2 43846742 non coding transcript exon variant T/C snv 0.75 5
rs11591147
PCSK9
0.677 0.360 1 55039974 missense variant G/A;T snv 1.2E-02 4
rs12670798
DNAH11 ; LOC105375183
1.000 0.040 7 21567734 intron variant T/C snv 0.26 4
rs2156552
LOC105372112
1.000 0.040 18 49655298 downstream gene variant A/G;T snv 4
rs3890182
ABCA1
0.925 0.120 9 104885374 intron variant G/A;T snv 4
rs4149268
ABCA1
1.000 0.040 9 104884939 intron variant C/T snv 0.46 4
rs6756629
ABCG5 ; ABCG8
0.925 0.080 2 43837951 missense variant G/A;T snv 6.7E-02 4
rs12272004 1.000 0.040 11 116733008 TF binding site variant C/A snv 9.8E-02 3