DisGeNET - a database of gene-disease associations

List of associated variants

Glioma, C0017638

Source: GWASDB ×

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs1800562	LOC108783645 ; HFE	0.435	0.880	6	26092913	missense variant	G/A	snv	3.3E-02	3.8E-02	14
rs2736100	TERT	0.550	0.880	5	1286401	3 prime UTR variant	C/A	snv		0.52	9
rs4977574	CDKN2B-AS1	0.695	0.520	9	22098575	intron variant	A/G;T	snv			8
rs7903146	TCF7L2	0.554	0.680	10	112998590	intron variant	C/G;T	snv			8
rs2383207	CDKN2B-AS1	0.695	0.280	9	22115960	intron variant	A/G	snv		0.64	7
rs1412829	CDKN2B-AS1	0.742	0.400	9	22043927	intron variant	A/G	snv		0.28	6
rs3217992	CDKN2B-AS1 ; CDKN2B	0.683	0.480	9	22003224	3 prime UTR variant	C/T	snv		0.32	6
rs4246215	FADS2 ; FEN1	0.677	0.320	11	61796827	3 prime UTR variant	G/C;T	snv			6
rs10116277	CDKN2B-AS1	0.827	0.160	9	22081398	intron variant	G/T	snv		0.62	5
rs4977756	CDKN2B-AS1	0.683	0.440	9	22068653	intron variant	G/A	snv		0.64	5
rs7049105	CDKN2B-AS1	0.807	0.120	9	22028802	intron variant	A/G	snv		0.58	5
rs944797	CDKN2B-AS1	0.882	0.120	9	22115287	intron variant	T/C;G	snv		0.49	5
rs20541	IL13 ; TH2LCRR	0.585	0.720	5	132660272	missense variant	A/G	snv	0.72	0.77	5
rs4635969		0.827	0.160	5	1308437	downstream gene variant	G/A;T	snv			4
rs10120688	CDKN2B-AS1	0.807	0.080	9	22056500	intron variant	G/A	snv		0.50	4
rs1537375	CDKN2B-AS1	0.882	0.120	9	22116072	intron variant	T/C;G	snv			4
rs1063192	CDKN2B ; CDKN2B-AS1	0.695	0.520	9	22003368	3 prime UTR variant	G/A;T	snv			4
rs10892258	LOC105369519	0.925	0.120	11	118709156	intron variant	G/A	snv		0.19	4
rs6010620	RTEL1 ; RTEL1-TNFRSF6B	0.701	0.360	20	63678486	intron variant	A/C;G	snv			4
rs10069690	TERT	0.595	0.560	5	1279675	intron variant	C/T	snv		0.36	4
rs2853676	TERT	0.667	0.560	5	1288432	intron variant	T/A;C	snv			4
rs2151280	CDKN2B-AS1	0.701	0.360	9	22034720	non coding transcript exon variant	G/A	snv		0.46	3
rs2157719	CDKN2B-AS1	0.708	0.360	9	22033367	non coding transcript exon variant	C/T	snv		0.71	3
rs7216389	GSDMB	0.732	0.440	17	39913696	intron variant	C/T	snv		0.60	3
rs4809324	RTEL1 ; RTEL1-TNFRSF6B	0.807	0.200	20	63686867	non coding transcript exon variant	T/C	snv		8.8E-02	3