DisGeNET - a database of gene-disease associations

List of associated variants

Malignant neoplasm of stomach, C0024623

Source: CURATED ×

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs10004195	TLR10	0.790	0.320	4	38783103	upstream gene variant	T/A	snv		0.29	1
rs10052657	PDE4D	0.807	0.120	5	59111944	intron variant	C/A	snv		0.17	5
rs10074991	PRKAA1	0.851	0.120	5	40790449	intron variant	G/A	snv		0.31	3
rs1016343	PCAT2 ; PCAT1 ; PRNCR1 ; CASC19	0.807	0.240	8	127081052	non coding transcript exon variant	C/T	snv		0.20	3
rs1045411	HMGB1	0.708	0.360	13	30459095	3 prime UTR variant	C/T	snv		0.20	2
rs10484761		0.807	0.080	6	40834522	intergenic variant	T/C	snv		0.31	2
rs10505477	CASC8 ; PCAT1 ; POU5F1B	0.658	0.400	8	127395198	intron variant	A/G	snv		0.40	13
rs1057519847	EGFR	0.570	0.560	7	55191821	missense variant	CT/AG	mnv			1
rs1057519848	EGFR	0.570	0.560	7	55191822	missense variant	TG/GT	mnv			1
rs1058808	ERBB2	0.658	0.360	17	39727784	missense variant	C/G	snv	0.61	0.52	1
rs10889677	IL23R	0.627	0.720	1	67259437	3 prime UTR variant	C/A	snv		0.27	2
rs11066280	HECTD4	0.742	0.280	12	112379979	intron variant	T/A	snv		7.0E-03	18
rs11187842	PLCE1	0.925	0.080	10	94292754	intron variant	C/T	snv		7.8E-02	1
rs11209026	IL23R	0.597	0.680	1	67240275	missense variant	G/A	snv	4.2E-02	4.6E-02	5
rs1131691014	TP53	0.439	0.800	17	7676154	frameshift variant	-/C	ins			1
rs1135354	IL18R1	0.925	0.080	2	102397842	3 prime UTR variant	T/G	snv		0.23	1
rs1143623	IL1B	0.677	0.440	2	112838252	upstream gene variant	C/G	snv		0.24	1
rs1143627	IL1B	0.605	0.760	2	112836810	5 prime UTR variant	G/A	snv		0.56	2
rs1143633	IL1B	0.752	0.280	2	112832890	intron variant	C/G;T	snv			1
rs11556218	IL16	0.653	0.600	15	81305928	missense variant	T/G	snv	9.6E-02	0.12	1
rs11614913	HOXC6 ; MIR196A2	0.512	0.760	12	53991815	mature miRNA variant	C/T	snv	0.39	0.34	1
rs11655237	LINC00511 ; LINC00673	0.724	0.280	17	72404025	non coding transcript exon variant	C/T	snv		0.16	1
rs11869286	STARD3	0.925	0.080	17	39657603	intron variant	G/C	snv		0.52	2
rs121434568	EGFR	0.568	0.560	7	55191822	missense variant	T/A;G	snv			1
rs12155758		0.882	0.080	8	142684467	upstream gene variant	G/A	snv		0.23	1