Disease: Malignant neoplasm of colon and/or rectum
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1048945
APEX1 ; OSGEP
0.851 0.120 14 20456008 missense variant G/C snv 2.1E-02 2.4E-02 6
rs1302103336
CHEK1
0.776 0.120 11 125637491 missense variant T/C snv 8.1E-06 12
rs1990172
MACC1
0.827 0.120 7 20164512 intron variant A/C snv 0.27 6
rs2302615
ODC1-DT ; SNORA80B ; ODC1
0.807 0.120 2 10448012 intron variant C/T snv 0.31 7
rs3735684
C7orf50 ; CYP2W1
0.851 0.120 7 985219 missense variant G/A snv 6.8E-02 7.3E-02 4
rs3796508
TLR6 ; TLR1
0.827 0.120 4 38828495 missense variant C/T snv 1.2E-02 1.2E-02 6
rs401618
HLA-A
0.827 0.120 6 29982433 downstream gene variant A/G;T snv 5
rs749507057
LOC401463 ; BHLHE22
0.851 0.120 8 64580966 missense variant C/T snv 4
rs932335
HSD11B1-AS1 ; HSD11B1
0.851 0.120 1 209732389 intron variant G/C snv 0.21 0.21 4
rs9620817
CHEK2
0.851 0.120 22 28712568 intron variant A/T snv 8.4E-02 4
rs10090154 0.807 0.160 8 127519892 intergenic variant T/A;C snv 7
rs10506868
VTI1A
0.716 0.160 10 112559621 intron variant C/T snv 3.1E-02 16
rs11196067
VTI1A
0.752 0.160 10 112709306 intron variant A/T snv 0.32 10
rs12241008
VTI1A
0.716 0.160 10 112520943 intron variant T/C snv 0.13 16
rs26279
MSH3
0.790 0.160 5 80873118 missense variant G/A snv 0.73 0.70 9
rs3116496
CD28
0.776 0.160 2 203729789 intron variant T/C snv 0.15 0.14 11
rs5277
PACERR ; PTGS2
0.790 0.160 1 186679065 synonymous variant C/G;T snv 0.12; 8.0E-06 9
rs7086803
VTI1A
0.763 0.160 10 112738717 intron variant G/A snv 0.20 9
rs10380
MTRR
0.807 0.200 5 7897078 missense variant C/T snv 0.16 0.18 6
rs11196172
TCF7L2
0.708 0.200 10 112967084 intron variant G/A snv 0.13 18
rs203462
AKAP10
0.807 0.200 17 19909228 missense variant T/C snv 0.37 0.43 7
rs3747093
YDJC
0.732 0.200 22 21630090 upstream gene variant G/A snv 0.32 16
rs63750447
MLH1
0.716 0.200 3 37025749 missense variant T/A snv 2.7E-03 7.5E-04 17
rs6498486
ERCC4
0.776 0.200 16 13919809 upstream gene variant A/C snv 0.27 8
rs7421861
LOC105373977 ; PDCD1
0.790 0.200 2 241853198 intron variant A/G;T snv 9