Disease: Metabolic Syndrome X
Source: GWASCAT ×
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs780094
GCKR
0.658 0.400 2 27518370 intron variant T/C snv 0.67 35
rs964184
ZPR1
0.716 0.440 11 116778201 3 prime UTR variant G/C snv 0.82 35
rs1535
FADS2
0.752 0.240 11 61830500 intron variant A/G snv 0.31 18
rs247617 0.827 0.160 16 56956804 regulatory region variant C/A snv 0.29 18
rs765547 0.827 0.160 8 20008763 intergenic variant G/A;C;T snv 17
rs780093
GCKR
0.763 0.240 2 27519736 intron variant T/C snv 0.68 16
rs3764261 0.732 0.280 16 56959412 upstream gene variant C/A snv 0.31 13
rs651821
APOA5
0.851 0.360 11 116791863 5 prime UTR variant C/T snv 0.88 0.89 10
rs9987289
LOC157273
1.000 0.040 8 9325848 non coding transcript exon variant A/G snv 0.87 8
rs1532085
ALDH1A2
0.882 0.080 15 58391167 intron variant A/G;T snv 7
rs174546
FADS1 ; FADS2
0.807 0.200 11 61802358 3 prime UTR variant C/T snv 0.28 7
rs673548
APOB
0.925 0.120 2 21014672 intron variant G/A;T snv 7
rs10468017
ALDH1A2
0.851 0.120 15 58386313 intron variant C/T snv 0.24 6
rs173539 0.882 0.080 16 56954132 intergenic variant C/T snv 0.33 6
rs1883025
ABCA1
0.807 0.120 9 104902020 intron variant C/T snv 0.28 6
rs2266788
APOA5 ; ZPR1
0.763 0.440 11 116789970 3 prime UTR variant G/A snv 0.93 6
rs12686004
ABCA1
1.000 0.040 9 104891145 intron variant G/A snv 9.1E-02 5
rs2075290
ZPR1
0.882 0.160 11 116782580 intron variant C/G;T snv 5
rs6589566
ZPR1
0.882 0.080 11 116781707 intron variant G/A;C;T snv 5
rs780092
GCKR
0.827 0.160 2 27520287 intron variant A/G snv 0.18 4
rs3905000
ABCA1
0.925 0.080 9 104894789 intron variant G/A snv 0.14 3
rs6589567 1.000 0.040 11 116799960 intergenic variant A/C;G;T snv 3
rs6494005
ALDH1A2 ; LIPC
1.000 0.040 15 58432325 non coding transcript exon variant A/G snv 0.38 2