DisGeNET - a database of gene-disease associations

Source: GWASDB

Variants associated to the Gene: HLA-DPA1 ×

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs9277341	HLA-DPA1	0.882	0.280	6	33071848	intron variant	T/A;C	snv			3
rs3077	HLA-DPA1	0.701	0.440	6	33065245	3 prime UTR variant	A/G	snv		0.29	3
rs987870	HLA-DPA1 ; HLA-DPB1	0.851	0.160	6	33075103	intron variant	A/G	snv		0.19	3
rs9277359	HLA-DPA1 ; HLA-DPB1	0.925	0.200	6	33082247	intron variant	C/A;T	snv			2
rs9277378	HLA-DPB1 ; HLA-DPA1	0.827	0.320	6	33082502	intron variant	A/G	snv		0.40	2
rs928976	HLA-DPB1 ; HLA-DPA1	0.925	0.200	6	33081434	intron variant	C/T	snv		0.41	2
rs1431403	HLA-DPB1 ; HLA-DPA1	0.925	0.200	6	33079254	intron variant	T/C	snv		0.37	2
rs7770370	HLA-DPB1 ; HLA-DPA1	0.925	0.160	6	33081144	non coding transcript exon variant	A/G	snv		0.27	2
rs1367728	HLA-DPA1	1.000	0.120	6	33067038	non coding transcript exon variant	G/A	snv		0.10	1
rs1126542	HLA-DPA1	1.000	0.080	6	33069647	missense variant	T/A;C;G	snv	0.24	0.28	1
rs17214519	HLA-DPA1	1.000	0.080	6	33064411	downstream gene variant	G/A;T	snv			1
rs2301220	HLA-DPA1	1.000	0.080	6	33070989	intron variant	C/A;T	snv			1
rs1431401	HLA-DPA1	1.000	0.080	6	33073409	intron variant	G/A	snv		0.29	1
rs6914995	HLA-DPA1	1.000	0.080	6	33072967	intron variant	G/C	snv		0.29	1
rs3830066	HLA-DPA1	1.000	0.080	6	33069410	non coding transcript exon variant	C/A;G	snv			1
rs9469341	HLA-DPA1	1.000	0.080	6	33068100	3 prime UTR variant	A/C;G	snv			1
rs9348904	HLA-DPA1	1.000	0.080	6	33073058	intron variant	A/G	snv		0.29	1
rs2301224	HLA-DPA1	1.000	0.080	6	33070592	intron variant	C/A	snv		0.28	1
rs10214910	HLA-DPA1	1.000	0.080	6	33069898	intron variant	C/A	snv	0.23	0.32	1
rs9469332	HLA-DPA1	1.000	0.080	6	33067099	non coding transcript exon variant	T/A;C	snv			1
rs1431400	HLA-DPA1	1.000	0.080	6	33073399	intron variant	C/T	snv		0.29	1
rs9469331	HLA-DPA1	1.000	0.080	6	33067008	non coding transcript exon variant	G/A	snv		0.32	1
rs4640928	HLA-DPA1	1.000	0.080	6	33072819	intron variant	A/G	snv		0.29	1
rs2308911	HLA-DPA1	1.000	0.080	6	33069803	missense variant	T/G	snv	0.23	0.28	1
rs1431399	HLA-DPA1	1.000	0.080	6	33073257	intron variant	A/G;T	snv			1