DisGeNET - a database of gene-disease associations

Source: CURATED

Variants associated to the Disease: Breast Carcinoma ×

Variants associated to the Gene: LSP1 ×

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs569550	LSP1	0.925	0.080	11	1865838	intron variant	T/G	snv		0.35	4
rs1973765	LSP1	1.000	0.080	11	1877434	intron variant	T/C	snv		0.37	3
rs3817198	LSP1	0.790	0.280	11	1887776	intron variant	T/C	snv		0.26	3
rs592373	LSP1	0.925	0.080	11	1869760	intron variant	G/A;T	snv	0.63; 6.8E-06		3
rs4980383	LSP1	1.000	0.080	11	1880867	non coding transcript exon variant	C/T	snv		0.37	1