DisGeNET - a database of gene-disease associations

Source: GWASCAT

Variants associated to the Disease: Rheumatoid Arthritis ×

Variants associated to the Gene: PTPN2 ×

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs80209296	PTPN2	0.925	0.200	18	12860802	intron variant	G/A	snv			2
rs2847297	PTPN2	0.827	0.200	18	12797695	intron variant	A/G	snv		0.40	1
rs8083786	PTPN2	1.000	0.120	18	12881362	intron variant	A/G	snv		0.27	1