DisGeNET - a database of gene-disease associations

Source: GWASCAT

Variants associated to the Disease: Asthma ×

Variants associated to the Gene: HLA-DQA1 ×

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs2187668	LOC107986589 ; HLA-DQA2 ; HLA-DQA1	0.701	0.480	6	32638107	intron variant	C/T	snv		3.3E-03	11
rs9272346	HLA-DQA1	0.790	0.320	6	32636595	intron variant	G/A	snv		0.54	4
rs146668528	HLA-DQA1	1.000	0.080	6	32630251	intron variant	C/T	snv		5.7E-02	2
rs17843604	HLA-DQA1	0.925	0.120	6	32652506	intergenic variant	C/T	snv		0.49	1
rs28798705	HLA-DQA1	1.000	0.080	6	32650032	downstream gene variant	A/G	snv		0.66	1
rs3104367	HLA-DQA1	1.000	0.080	6	32635710	intron variant	T/C	snv		0.57	1
rs9273123	HLA-DQA1	1.000	0.080	6	32644956	non coding transcript exon variant	G/A	snv		0.46	1
rs28383364	HLA-DQA2 ; LOC107986589 ; HLA-DQA1	1.000	0.080	6	32639135	3 prime UTR variant	A/G	snv		0.11	1
rs28383454	LOC107986589 ; HLA-DQA1	1.000	0.080	6	32641593	intron variant	G/C;T	snv	3.2E-03		1